CsGy3G032250 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G032250
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein YIP
Location	Gy14Chr3: 31647072 .. 31648144 (+)
RNA-Seq Expression	CsGy3G032250
Synteny	CsGy3G032250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATCGAATCTTCTCTAATATTTTCCCCATTTTCCTTTTACTCTGTGTAGAGCATTCGATCTCGAGGTGAATCCCTAAATCTCCAAATCGTTTTCGATTTACAATCGGTTTCTTCTTTCAACCCATTTCAGATTTCAGTGTTTTGTTTCTTCAATCCATGGGGACGGTGAAGAAGGAGTTCGCTGTTCCGCCAGTGGTTTTTCCCTCTGGCGGTAACCCCAATCTTCAACAACGGCGGGGTGTGGCGACGGCGCCGTTTCAGCCTCCTCGGCAGACTGGCTCCAGCATTCCGTTTATGTCATTTGACATCGGATCCGCCGCTGCTGCTTCCACATCCTCCGGCAGTATCTATGGTGGTCCTATTGGTGGTGGGTCTATCCCTGGTGGTGCTAATTTCGAAGACGAAGAACCCCTCCTCGATGAACTCGGGATCCACCCTGATCAAATCTGGAAGAAAACCAAGTCGATCTTGAATCCGTTCCGGGTCAAACCCGATGTGCACAAGGACTCGGACTTGTCTGGACCGATTCTCTTATATATGTTCTTTGGCCTCTTCCAGTTGCTTGCCGGTAAGATCCAATTCGGCGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTTCTGTATGTTGTGTTCAATATGTTGGCCGGGCGGAATGGTAATTTGAATCTTCACACGTGTACTAGCGTGGTTGGGTACTGTATGTTGCCTGTCGTGGTTTTGTCGGCTGTGTCTTTGTTCCTGCCGCAAGCCGGTCTAGTGAGATTCGCAGTTGCTGGAGTTTTTGTGTTGTGGGCGACGAGGATCTGTACGAGTCTTATGGTTTCTCTTGCTGATGGTGGGGATGAGCACCGTGGCTTGATAGCGTATGCTTGTTTTTTGATTTTTACTCTGTTTTCGCTGTTAGTTATATTTTAGTTCTGATAATGCAACTTCAGCTTTGTGATTAGCATTGACATTTTTTGTTTTTTACGAAAAGGGGAAAAAAAGAAAAGAGCACACTCTGTACTGAATTTTTTGTTTACTATATTGATTACTAGTTCAAGTTTGATTGATGGTGGAATGGGAAAC

mRNA sequence

TGCATCGAATCTTCTCTAATATTTTCCCCATTTTCCTTTTACTCTGTGTAGAGCATTCGATCTCGAGGTGAATCCCTAAATCTCCAAATCGTTTTCGATTTACAATCGGTTTCTTCTTTCAACCCATTTCAGATTTCAGTGTTTTGTTTCTTCAATCCATGGGGACGGTGAAGAAGGAGTTCGCTGTTCCGCCAGTGGTTTTTCCCTCTGGCGGTAACCCCAATCTTCAACAACGGCGGGGTGTGGCGACGGCGCCGTTTCAGCCTCCTCGGCAGACTGGCTCCAGCATTCCGTTTATGTCATTTGACATCGGATCCGCCGCTGCTGCTTCCACATCCTCCGGCAGTATCTATGGTGGTCCTATTGGTGGTGGGTCTATCCCTGGTGGTGCTAATTTCGAAGACGAAGAACCCCTCCTCGATGAACTCGGGATCCACCCTGATCAAATCTGGAAGAAAACCAAGTCGATCTTGAATCCGTTCCGGGTCAAACCCGATGTGCACAAGGACTCGGACTTGTCTGGACCGATTCTCTTATATATGTTCTTTGGCCTCTTCCAGTTGCTTGCCGGTAAGATCCAATTCGGCGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTTCTGTATGTTGTGTTCAATATGTTGGCCGGGCGGAATGGTAATTTGAATCTTCACACGTGTACTAGCGTGGTTGGGTACTGTATGTTGCCTGTCGTGGTTTTGTCGGCTGTGTCTTTGTTCCTGCCGCAAGCCGGTCTAGTGAGATTCGCAGTTGCTGGAGTTTTTGTGTTGTGGGCGACGAGGATCTGTACGAGTCTTATGGTTTCTCTTGCTGATGGTGGGGATGAGCACCGTGGCTTGATAGCGTATGCTTGTTTTTTGATTTTTACTCTGTTTTCGCTGTTAGTTATATTTTAGTTCTGATAATGCAACTTCAGCTTTGTGATTAGCATTGACATTTTTTGTTTTTTACGAAAAGGGGAAAAAAAGAAAAGAGCACACTCTGTACTGAATTTTTTGTTTACTATATTGATTACTAGTTCAAGTTTGATTGATGGTGGAATGGGAAAC

Coding sequence (CDS)

ATGGGGACGGTGAAGAAGGAGTTCGCTGTTCCGCCAGTGGTTTTTCCCTCTGGCGGTAACCCCAATCTTCAACAACGGCGGGGTGTGGCGACGGCGCCGTTTCAGCCTCCTCGGCAGACTGGCTCCAGCATTCCGTTTATGTCATTTGACATCGGATCCGCCGCTGCTGCTTCCACATCCTCCGGCAGTATCTATGGTGGTCCTATTGGTGGTGGGTCTATCCCTGGTGGTGCTAATTTCGAAGACGAAGAACCCCTCCTCGATGAACTCGGGATCCACCCTGATCAAATCTGGAAGAAAACCAAGTCGATCTTGAATCCGTTCCGGGTCAAACCCGATGTGCACAAGGACTCGGACTTGTCTGGACCGATTCTCTTATATATGTTCTTTGGCCTCTTCCAGTTGCTTGCCGGTAAGATCCAATTCGGCGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTTCTGTATGTTGTGTTCAATATGTTGGCCGGGCGGAATGGTAATTTGAATCTTCACACGTGTACTAGCGTGGTTGGGTACTGTATGTTGCCTGTCGTGGTTTTGTCGGCTGTGTCTTTGTTCCTGCCGCAAGCCGGTCTAGTGAGATTCGCAGTTGCTGGAGTTTTTGTGTTGTGGGCGACGAGGATCTGTACGAGTCTTATGGTTTCTCTTGCTGATGGTGGGGATGAGCACCGTGGCTTGATAGCGTATGCTTGTTTTTTGATTTTTACTCTGTTTTCGCTGTTAGTTATATTTTAG

Protein sequence

MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTSSGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF*

Homology

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BLAST of CsGy3G032250 vs. ExPASy Swiss-Prot
Match: Q54QY3 (Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 74/201 (36.82%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 58  STSSGSIYG--GPIGGGSIPGGA--NFEDEEPLLDELGIHPDQIWKKTKSILNPF-RVKP 117
           ST  G+ Y   G +GGG   GG   +F++E PLL+ELGI+ D I  KT S+LNP  ++  
Sbjct: 15  STPQGAYYDNTGRMGGGGGMGGPTDSFDNELPLLEELGINFDHIRSKTLSVLNPLKKIDS 74

Query: 118 DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNL 177
            +  D+DL GPIL  +  G   L++GKIQFG I G  ++  + +Y+V N+++ +   +++
Sbjct: 75  HIMDDTDLGGPILFGLLLGFSLLMSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDI 134

Query: 178 HTCTSVVGYCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEH 237
           +   SV+GYC+LP++ LS  SL +   G+V + + G  ++W+T   + + V +    D+ 
Sbjct: 135 YRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAIVWSTYSASKMFVKVLSMIDQ- 194

Query: 238 RGLIAYACFLIFTLFSLLVIF 254
           R L+AY   L++T F+L+  F
Sbjct: 195 RILVAYPVGLLYTGFALITAF 212

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BLAST of CsGy3G032250 vs. ExPASy Swiss-Prot
Match: Q66KA5 (Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.5e-25
Identity = 60/178 (33.71%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 77  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQL 136
           G+ F+DE PLL+ELGI+ D IW+KT ++L+P +V   ++  ++DL+GP++  + FG   L
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLL 141

Query: 137 LAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLF 196
           LAGKIQFG + G   +  + +Y + N+++     ++    +SV+GYC+LP+++LS+ ++ 
Sbjct: 142 LAGKIQFGYVYGISAIGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSSFAVI 201

Query: 197 LPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 254
               G++   +A + + W +   + + +S A   D  + L+AY C L++ +F+L+ +F
Sbjct: 202 FSLQGILGIVLAALIIGWCSFSASKIFIS-ALAMDGQQVLVAYPCALLYGVFALISVF 256

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BLAST of CsGy3G032250 vs. ExPASy Swiss-Prot
Match: Q8N8F6 (Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24
Identity = 61/176 (34.66%), Postives = 108/176 (61.36%), Query Frame = 0


Query: 79  NFEDEEPLLDELGIHPDQIWKKTKSILNPFR-VKPDVHKDSDLSGPILLYMFFGLFQLLA 138
           +F++E PLL+ELGIH D IW+KT ++LNP + V   +  ++DL+GPIL  +  G   LLA
Sbjct: 108 SFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLA 167

Query: 139 GKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLP 198
           GK+QFG + G   +  + ++ + N+++  +  ++     SV+GYC+LP+V+LS  ++F  
Sbjct: 168 GKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCAMFFS 227

Query: 199 QAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 254
             G+     + V + W +   + + ++ A   +  + L+AY C +++ LF+LL IF
Sbjct: 228 LQGIFGIMSSLVIIGWCSLSASKIFIA-ALHMEGQQLLVAYPCAILYGLFALLTIF 280

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BLAST of CsGy3G032250 vs. ExPASy Swiss-Prot
Match: Q7SXS2 (Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-24
Identity = 60/178 (33.71%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 77  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQL 136
           G+ F+DE PLL+ELGI+ D IW+KT ++L+P +V    +  ++DL+GP++  + FG   L
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 141

Query: 137 LAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLF 196
           LAGKIQFG + G   +  + +Y + N+++     ++    +SV+GYC+LP+++LS  ++ 
Sbjct: 142 LAGKIQFGYVYGISAMGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSTFAVI 201

Query: 197 LPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 254
               G++   +A + + W +   + + +S A   D  + L+AY C L++ +F+L+ +F
Sbjct: 202 FSLQGILGIVLAALIIGWCSFSASKIFIS-ALAMDGQQLLVAYPCALLYGVFALISVF 256

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BLAST of CsGy3G032250 vs. ExPASy Swiss-Prot
Match: A5D7K7 (Protein YIPF7 OS=Bos taurus OX=9913 GN=YIPF7 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.4e-24
Identity = 65/177 (36.72%), Postives = 107/177 (60.45%), Query Frame = 0


Query: 79  NFEDEEPLLDELGIHPDQIWKKTKSILNPFR-VKPDVHKDSDLSGPILLYMFFGLFQLLA 138
           +FE+E PLL+ELGI+ D IW+KT ++LNP +     +  ++DL+GPIL  M  G   LLA
Sbjct: 83  SFEEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCMALGATLLLA 142

Query: 139 GKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLP 198
           GK+QFG + G   +  + ++ + N+++  +  ++     SV+GYC+LP+V+LS+ ++F  
Sbjct: 143 GKVQFGYVYGMSAIGCLGIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAIFFS 202

Query: 199 QAGLVRFAVAGVFVLWATRICTSLMVS-LADGGDEHRGLIAYACFLIFTLFSLLVIF 254
             G      A V + W +   + +  S LA  G +   LIAY C L++ LF+L+ +F
Sbjct: 203 LQGTFGTVSALVIIGWCSLSASKIFTSALAMEGQQL--LIAYPCALLYGLFALVTVF 255

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BLAST of CsGy3G032250 vs. NCBI nr
Match: XP_004153735.2 (protein YIPF5 homolog [Cucumis sativus])

HSP 1 Score: 495 bits (1275), Expect = 1.73e-176
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

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BLAST of CsGy3G032250 vs. NCBI nr
Match: XP_008442831.1 (PREDICTED: protein YIPF5 homolog [Cucumis melo])

HSP 1 Score: 494 bits (1272), Expect = 4.97e-176
Identity = 252/253 (99.60%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAGL+RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLLRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

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BLAST of CsGy3G032250 vs. NCBI nr
Match: XP_038903090.1 (protein YIPF5 homolog [Benincasa hispida])

HSP 1 Score: 491 bits (1264), Expect = 8.24e-175
Identity = 249/253 (98.42%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRPTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SGSIYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFR+KPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRIKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVV+LSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVLLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

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BLAST of CsGy3G032250 vs. NCBI nr
Match: XP_022144590.1 (protein YIPF5 homolog isoform X1 [Momordica charantia] >XP_022144591.1 protein YIPF5 homolog isoform X2 [Momordica charantia] >XP_022144592.1 protein YIPF5 homolog isoform X3 [Momordica charantia])

HSP 1 Score: 479 bits (1234), Expect = 2.98e-170
Identity = 246/253 (97.23%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           S  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQ G+VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 252

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BLAST of CsGy3G032250 vs. NCBI nr
Match: XP_022983078.1 (protein YIPF5 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 478 bits (1230), Expect = 1.21e-169
Identity = 244/253 (96.44%), Postives = 247/253 (97.63%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNL QR GVATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQR-GVATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SG IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVV SAVSLFLPQAG++RF VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVFSAVSLFLPQAGILRFGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 252

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BLAST of CsGy3G032250 vs. ExPASy TrEMBL
Match: A0A0A0LGM5 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_3G776330 PE=3 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 8.40e-177
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

[Close]

BLAST of CsGy3G032250 vs. ExPASy TrEMBL
Match: A0A1S3B7C5 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103486599 PE=3 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 2.41e-176
Identity = 252/253 (99.60%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAGL+RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLLRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

[Close]

BLAST of CsGy3G032250 vs. ExPASy TrEMBL
Match: A0A6J1CU38 (Protein YIP OS=Momordica charantia OX=3673 GN=LOC111014238 PE=3 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 1.44e-170
Identity = 246/253 (97.23%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           S  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQ G+VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 252

[Close]

BLAST of CsGy3G032250 vs. ExPASy TrEMBL
Match: A0A6J1J6R1 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111481733 PE=3 SV=1)

HSP 1 Score: 478 bits (1230), Expect = 5.87e-170
Identity = 244/253 (96.44%), Postives = 247/253 (97.63%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNL QR GVATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLHQR-GVATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SG IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL
Sbjct: 61  SGGIYGGPIGGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVV SAVSLFLPQAG++RF VAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVFSAVSLFLPQAGILRFGVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 252

[Close]

BLAST of CsGy3G032250 vs. ExPASy TrEMBL
Match: A0A6J1EK74 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111434052 PE=3 SV=1)

HSP 1 Score: 477 bits (1228), Expect = 1.18e-169
Identity = 245/253 (96.84%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120
           SGSIYGG I GGS+PGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRV+PDVHKDSDL
Sbjct: 61  SGSIYGGSIVGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAG++RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGIIRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 252

[Close]

BLAST of CsGy3G032250 vs. TAIR 10
Match: AT2G36300.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 369.8 bits (948), Expect = 1.8e-102
Identity = 197/254 (77.56%), Postives = 220/254 (86.61%), Query Frame = 0


Query: 6   KEFAVPPVVFPSGGN---PNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTSSG 65
           K+FAVPPVVFPSGG+    N+QQRR  AT PFQPPR + S+IPFMSFDIGSAAA+S +  
Sbjct: 3   KDFAVPPVVFPSGGSSGGANVQQRRFPAT-PFQPPRPSSSAIPFMSFDIGSAAASSATPA 62

Query: 66  SIYGGPIGGGSIPGG--ANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 125
             +GG I   S  GG  A+FEDEEPLLDELGIHPDQIWKKT+SILNPFR+   VHKDSDL
Sbjct: 63  GPFGGTIASSSSFGGGSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQAVHKDSDL 122

Query: 126 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 185
           SGPI LY+   LFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS+VG
Sbjct: 123 SGPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSLVG 182

Query: 186 YCMLPVVVLSAVSLFLPQ-AGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYA 245
           YC+LPVVVLSAVSLF+PQ AG VRF +A +FVLW+TR C++L+VSLADGG+EHRGLIAYA
Sbjct: 183 YCLLPVVVLSAVSLFVPQGAGPVRFVLAALFVLWSTRACSTLVVSLADGGEEHRGLIAYA 242

Query: 246 CFLIFTLFSLLVIF 254
           CFLI+TLFSLLVIF
Sbjct: 243 CFLIYTLFSLLVIF 255

[Close]

BLAST of CsGy3G032250 vs. TAIR 10
Match: AT3G52760.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 339.3 bits (869), Expect = 2.6e-93
Identity = 184/257 (71.60%), Postives = 211/257 (82.10%), Query Frame = 0


Query: 6   KEFAVPPVVFPSGGN----PNLQQRRGVATAPFQPPRQT--GSSIPFMSFDIGSAAAAST 65
           K+F +PPVVFP+ G+     N+QQRR V TAP+QPPRQ+   SSIPF+ F+IGS AA S 
Sbjct: 3   KDFPIPPVVFPTSGSSPATANVQQRR-VPTAPYQPPRQSSASSSIPFIPFEIGS-AAVSM 62

Query: 66  SSGSIYGGPIGGGSIPGG--ANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKD 125
            +G   G      S   G  A+FEDEEPLLDELGIHPDQIWKKT+SILNPFR+   VHKD
Sbjct: 63  PAGPFDGTIASSASFGRGVSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQTVHKD 122

Query: 126 SDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS 185
           SDLSGPI LY+   LFQLLAGKIQFGVILGW+VVSSIFLY+VFNMLAGRNGNLNLHTCTS
Sbjct: 123 SDLSGPIFLYLALCLFQLLAGKIQFGVILGWVVVSSIFLYIVFNMLAGRNGNLNLHTCTS 182

Query: 186 VVGYCMLPVVVLSAVSLFLPQ-AGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLI 245
           +VGY +LPVV+LSAVSLF+PQ AG VRF +   FVLWATR C++L+VSLADGG+EHRGLI
Sbjct: 183 LVGYSLLPVVILSAVSLFVPQGAGPVRFVLGAAFVLWATRACSNLVVSLADGGEEHRGLI 242

Query: 246 AYACFLIFTLFSLLVIF 254
           +YACFLI+TLFSLLVIF
Sbjct: 243 SYACFLIYTLFSLLVIF 257

The following BLAST results are available for this feature:

BLAST of CsGy3G032250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54QY3	1.3e-25	36.82	Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1	[more]
Q66KA5	6.5e-25	33.71	Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1	[more]
Q8N8F6	1.9e-24	34.66	Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2	[more]
Q7SXS2	2.5e-24	33.71	Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1	[more]
A5D7K7	9.4e-24	36.72	Protein YIPF7 OS=Bos taurus OX=9913 GN=YIPF7 PE=2 SV=1	[more]

BLAST of CsGy3G032250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153735.2	1.73e-176	100.00	protein YIPF5 homolog [Cucumis sativus]	[more]
XP_008442831.1	4.97e-176	99.60	PREDICTED: protein YIPF5 homolog [Cucumis melo]	[more]
XP_038903090.1	8.24e-175	98.42	protein YIPF5 homolog [Benincasa hispida]	[more]
XP_022144590.1	2.98e-170	97.23	protein YIPF5 homolog isoform X1 [Momordica charantia] >XP_022144591.1 protein Y...	[more]
XP_022983078.1	1.21e-169	96.44	protein YIPF5 homolog isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy3G032250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGM5	8.40e-177	100.00	Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_3G776330 PE=3 SV=1	[more]
A0A1S3B7C5	2.41e-176	99.60	Protein YIP OS=Cucumis melo OX=3656 GN=LOC103486599 PE=3 SV=1	[more]
A0A6J1CU38	1.44e-170	97.23	Protein YIP OS=Momordica charantia OX=3673 GN=LOC111014238 PE=3 SV=1	[more]
A0A6J1J6R1	5.87e-170	96.44	Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111481733 PE=3 SV=1	[more]
A0A6J1EK74	1.18e-169	96.84	Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111434052 PE=3 SV=1	[more]

BLAST of CsGy3G032250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36300.1	1.8e-102	77.56	Integral membrane Yip1 family protein	[more]
AT3G52760.1	2.6e-93	71.60	Integral membrane Yip1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 127..250 e-value: 3.8E-8 score: 33.4
None	No IPR available	PANTHER	PTHR21236:SF21	PROTEIN YIPF	coord: 6..253
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 6..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G032250.2	CsGy3G032250.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0010506	regulation of autophagy
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0035658	Mon1-Ccz1 complex
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016020	membrane