CsGy3G032080 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G032080
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RAB6-interacting golgin
Location	Gy14Chr3: 31431487 .. 31434321 (-)
RNA-Seq Expression	CsGy3G032080
Synteny	CsGy3G032080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTAACACTTTTTCATATGTAATTGTAAAACTATTAAAGTACACGTAAATATAGACTATATATATATTTGTAATGGAAAATGAAAACCTAGTTTAAACGGCTAGTTTTATTTATTTATTTATTTATTTTTATTAAAGAAAGGAAAAGGATGAAATGTATTAAAAAAAGAATTTCAAACTTTTTTTAGGGAAGAAAATGGTATTTAATAAAAGGAGGAGGCTGGGGGGTGGGCACTTTCAAAAGGCATTTCTATTCTATTCTTAGTTTTTATAAGCACTTAGCAATACCCATAACCCACAAGCTGAAAAGAAAAATTGAAAATACAGCACAAACCCCATCATTCCAAAAGCAAAAGCGAAAGAAGAGAGAGAAAAAGCAACAAACCCAGAAAACACAAAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAATCAGAAGAACAGAGGAATTTTTTTAAGGAAATTCAAAGAAATACGAAACAAGGGTTTTGTGGGTTAACAGGATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGTAAGGAGGGATTTCTTTTCTTTTTTTTTCACAGCATTTTAAGGGTTTTTACCTTTAAATCTTTCATGGGTTTTTCTTAGATTTTGGTTTTTGAGACACGCTTTTAACTTTTCTGCTGTGTTTTACATGAATTTGGTGGGTTTGGGGGAAAAGTTGGGTATAAAATTGTGGAAGATCTCTTCAATATGACTGTAATTTTGAGGGAAATATTTGCTAAAAAGGTCTGAGGACAAGGGGTTCTTAACCCCTTTTGCATGATTTAGTTCTATTATCTATGGGATTTGGGATTAAATTAATGTTTTATCAAGGAATTAGGAGCAGCTTTATGTCAGATTTGTAAGTTTCTTTGTATTATTTTGACTTGCATTCTTAACATATAACCTTTTCTAGACTAATGTCCCATTTTGTATGTGTATTTTCGTTACTTTAGTTACCTGAAAATGAGGCTCTGATCTGAATTTTAGCCTTTTATTTTTGTGTTGTTTTCAAACCTTTTCATGTCAAGGAACAAGAGCAGTTGAAAGAGCTTAAAAAACACCTCATTCCCTTGAGAGAGAAGAGAGATTCTCATTTGCATAGTCTATTTACTCATGAATTCAAGGAGTAGATGATTATGGTGCTAAAACATTATCTACAATGCTTTGATGTTCGTCTGTGGTTGGTTAGTTCAAAGAATCTTTTAGTTCTATGATTAGATTAGGTGGACAAGCAATTAGTAGAAGAAGAGTTTATATGGCAATGTCCAACGATTTATATCAGAAGTAGAAATATGAAGAAATAGTTACAGCAGATACTTTATTCTATGGATAAAGGATGTATTTGATAGAAGAATCGCCGTAAAGATCAACTAGTCAGATTTTTGGTTGTTTTCGAATTGGATTCTGTTTGTTGTTCTTGTTGTTTCGGATAATCAGATGAATTTTACATACACCAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGTGAGATTTGGGGCAAGGAATACCTGTGTGGACAAGCATTGCCTAGCATATAAGATGATGTTGCATTCTGTGAATCTCAATTATTGTACCTTACAATATCAGATAGGACCACTGAGCTGGTTTTCGTATTGTCTGTAATAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGTTCCCTTGAGTTCCTTTCGTTCTCCATCATCTGCACGTCAAACGTCATAAATAACCGGGTGATAGGAACCAAATTTTGCACAACTGGAGGCTATTCAATAAATTTTGAACCTTGTTGATTTGGACTCATCAGTTCAGCGATTGAAAAATCTTATCGATTTGGCCTCCATTAGTTGTAAAACTCTTGTTCTCGTCGTGTATTATCATTCGGGTTTCAATTGATGGATTGACTTGTTTTGTTTTTTTGGTGGGCAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGGAGTGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTTGTGTTTTGGGTGTATTTTTATAATTTGTCCTTGTTTGTTTATTTTTCCTTTAGAGAAGTTACTCAAAAACATTTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTCATCTCCCCCTTTCTTTTTCCTTTTCTTCTCTCTTTTTCTCATCAACTTCTCAATCTCTCTCTCAAATTAGAGGAAAAATCCAATTAGTCAAAGCTTAAATATTTGTATGTAGAAACTACTAAATCACCAAAGTTTGTTGATGAATGCTTAATAATAAATCTTCATCTTAACCATTATGATTAACCTCTTTGAACAACCCAAGTTATTTTTAGGGGAAAATTTTTATTTGA

mRNA sequence

TATTTAACACTTTTTCATATGTAATTGTAAAACTATTAAAGTACACGTAAATATAGACTATATATATATTTGTAATGGAAAATGAAAACCTAGTTTAAACGGCTAGTTTTATTTATTTATTTATTTATTTTTATTAAAGAAAGGAAAAGGATGAAATGTATTAAAAAAAGAATTTCAAACTTTTTTTAGGGAAGAAAATGGTATTTAATAAAAGGAGGAGGCTGGGGGGTGGGCACTTTCAAAAGGCATTTCTATTCTATTCTTAGTTTTTATAAGCACTTAGCAATACCCATAACCCACAAGCTGAAAAGAAAAATTGAAAATACAGCACAAACCCCATCATTCCAAAAGCAAAAGCGAAAGAAGAGAGAGAAAAAGCAACAAACCCAGAAAACACAAAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAATCAGAAGAACAGAGGAATTTTTTTAAGGAAATTCAAAGAAATACGAAACAAGGGTTTTGTGGGTTAACAGGATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGTTCCCTTGAGTTCCTTTCGTTCTCCATCATCTGCACGTCAAACGTCATAAATAACCGGGTGATAGGAACCAAATTTTGCACAACTGGAGGCTATTCAATAAATTTTGAACCTTGTTGATTTGGACTCATCAGTTCAGCGATTGAAAAATCTTATCGATTTGGCCTCCATTAGTTGTAAAACTCTTGTTCTCGTCGTGTATTATCATTCGGGTTTCAATTGATGGATTGACTTGTTTTGTTTTTTTGGTGGGCAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGGAGTGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTTGTGTTTTGGGTGTATTTTTATAATTTGTCCTTGTTTGTTTATTTTTCCTTTAGAGAAGTTACTCAAAAACATTTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTCATCTCCCCCTTTCTTTTTCCTTTTCTTCTCTCTTTTTCTCATCAACTTCTCAATCTCTCTCTCAAATTAGAGGAAAAATCCAATTAGTCAAAGCTTAAATATTTGTATGTAGAAACTACTAAATCACCAAAGTTTGTTGATGAATGCTTAATAATAAATCTTCATCTTAACCATTATGATTAACCTCTTTGAACAACCCAAGTTATTTTTAGGGGAAAATTTTTATTTGA

Coding sequence (CDS)

ATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGTTCCCTTGAGTTCCTTTCGTTCTCCATCATCTGCACGTCAAACGTCATAAATAACCGGGTGATAGGAACCAAATTTTGCACAACTGGAGGCTATTCAATAAATTTTGAACCTTGTTGA

Protein sequence

MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMEVSSLEFLSFSIICTSNVINNRVIGTKFCTTGGYSINFEPC*

Homology

[Close]

BLAST of CsGy3G032080 vs. NCBI nr
Match: XP_004137876.1 (GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_000951 [Cucumis sativus])

HSP 1 Score: 254 bits (650), Expect = 8.74e-84
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEALEAFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa] >TYK25229.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (647), Expect = 2.50e-83
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEALEAFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. NCBI nr
Match: XP_038903091.1 (GRB10-interacting GYF protein 2-like [Benincasa hispida])

HSP 1 Score: 251 bits (642), Expect = 1.44e-82
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEALEAFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. NCBI nr
Match: XP_022945279.1 (uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 uncharacterized protein LOC111498737 [Cucurbita maxima] >XP_023539891.1 uncharacterized protein LOC111800435 [Cucurbita pepo subsp. pepo] >KAG6596553.1 hypothetical protein SDJN03_09733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028089.1 hypothetical protein SDJN02_09269 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 247 bits (630), Expect = 9.70e-81
Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEAL+AFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia])

HSP 1 Score: 234 bits (597), Expect = 9.57e-76
Identity = 132/140 (94.29%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 7   QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGR 66
           Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGR
Sbjct: 5   QPQQQLMVQNNQGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGR 64

Query: 67  VEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEA 126
           VEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK+AL+A
Sbjct: 65  VEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKDALDA 124

Query: 127 FNDKNKEKVQLITKLMEVSS 146
           FN+KNKEKVQLITKLME+ S
Sbjct: 125 FNEKNKEKVQLITKLMELVS 144

[Close]

BLAST of CsGy3G032080 vs. ExPASy TrEMBL
Match: A0A0A0LGI7 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 4.23e-84
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEALEAFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. ExPASy TrEMBL
Match: A0A5D3DPH8 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003590 PE=3 SV=1)

HSP 1 Score: 253 bits (647), Expect = 1.21e-83
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEALEAFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. ExPASy TrEMBL
Match: A0A1S3B6L6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1)

HSP 1 Score: 253 bits (647), Expect = 1.21e-83
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEALEAFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. ExPASy TrEMBL
Match: A0A6J1KYK3 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 4.70e-81
Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEAL+AFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. ExPASy TrEMBL
Match: A0A6J1G0J9 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 4.70e-81
Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMEVSS 146
           KEAL+AFNDKNKEKVQLITKLME+ S
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVS 146

[Close]

BLAST of CsGy3G032080 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 198.0 bits (502), Expect = 6.7e-51
Identity = 107/127 (84.25%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 18  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 77
           +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29  SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 78  REELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQL 137
           REELE LADPMRKEVA VRKKID+VNKELKPLGHT QKKE+EYKEALEAFN+KN+EKVQL
Sbjct: 89  REELEGLADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQL 148

Query: 138 ITKLMEV 145
           IT+LME+
Sbjct: 149 ITRLMEL 155

[Close]

BLAST of CsGy3G032080 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 192.6 bits (488), Expect = 2.8e-49
Identity = 106/146 (72.60%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNKELKPLG T QKKE+EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMEVSSL 148
           EAL+ FN+KN+EKVQLITKLME+  L
Sbjct: 148 EALDTFNEKNREKVQLITKLMEMEQL 173

[Close]

BLAST of CsGy3G032080 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 191.4 bits (485), Expect = 6.3e-49
Identity = 105/143 (73.43%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNKELKPLG T QKKE+EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMEV 145
           EAL+ FN+KN+EKVQLITKLME+
Sbjct: 148 EALDTFNEKNREKVQLITKLMEL 170

[Close]

BLAST of CsGy3G032080 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 187.6 bits (475), Expect = 9.1e-48
Identity = 104/143 (72.73%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNKELKPLG T QKK  EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMEV 145
           EAL+ FN+KN+EKVQLITKLME+
Sbjct: 148 EALDTFNEKNREKVQLITKLMEL 170

[Close]

BLAST of CsGy3G032080 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-46
Identity = 105/141 (74.47%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 7   QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGR 66
           Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGR
Sbjct: 10  QPPQQMM------SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGR 69

Query: 67  VEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEA 126
           VEEET+RLA IREELE +ADPMRKEV  VRKKID+VNKELKPLG T QKKE+EYKEAL+ 
Sbjct: 70  VEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDT 129

Query: 127 FNDKNKEKVQLITKLMEVSSL 148
           FN+KN+EKVQLITKLME+  L
Sbjct: 130 FNEKNREKVQLITKLMEMGQL 144

The following BLAST results are available for this feature:

BLAST of CsGy3G032080 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G032080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137876.1	8.74e-84	98.63	GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical prote...	[more]
XP_008442808.1	2.50e-83	97.95	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 put...	[more]
XP_038903091.1	1.44e-82	97.95	GRB10-interacting GYF protein 2-like [Benincasa hispida]	[more]
XP_022945279.1	9.70e-81	95.21	uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 unchar...	[more]
XP_022144720.1	9.57e-76	94.29	uncharacterized protein LOC111014340 [Momordica charantia]	[more]

BLAST of CsGy3G032080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGI7	4.23e-84	98.63	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1	[more]
A0A5D3DPH8	1.21e-83	97.95	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6L6	1.21e-83	97.95	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1	[more]
A0A6J1KYK3	4.70e-81	95.21	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1	[more]
A0A6J1G0J9	4.70e-81	95.21	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1	[more]

BLAST of CsGy3G032080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	6.7e-51	84.25	Family of unknown function (DUF662)	[more]
AT2G36410.1	2.8e-49	72.60	Family of unknown function (DUF662)	[more]
AT2G36410.2	6.3e-49	73.43	Family of unknown function (DUF662)	[more]
AT2G36410.3	9.1e-48	72.73	Family of unknown function (DUF662)	[more]
AT3G52920.1	3.8e-46	74.47	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..50
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 12..147
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 18..145 e-value: 6.5E-64 score: 214.5
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 12..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G032080.2	CsGy3G032080.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus