CsGy3G030790 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G030790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DNA-binding protein S1FA
Location	Gy14Chr3: 30683871 .. 30687383 (-)
RNA-Seq Expression	CsGy3G030790
Synteny	CsGy3G030790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACGATCAATTAAGCGGCCCATAGAAAGCGCAGGAACTCGGTTGGACCAAAATCGCCGATTTATATGAATCTTCATCTTTTGTTCTTAGATCTCTCTGACATTTTCATTATCGTCAACCCTTTGCCATCGATCTCATCCCTACAATTGCCGGTATTCTGGATCTTCTTGCCGGTCGATCTACCCGGCTCTGAGTCATAGCATGGCTTCAGCCAATGGCAAGGTATGATTGTCGAACGGCTCTTGGGTTCTTGCTTTTTTGCGTTCAATTTCACGAGATCTGTGCGTGTTTTTTTTTTTTTTCTCTTTTAATTTGATTTCTGATTCCGTGTTCGAATGCCTGTATATTCGATTTGATTGTCTGGATCGATCAGTGTACGTGGAGATTCGTCTTTTTTCTTTATTCTGAAAGCTTGATTTCACCTGGTTGGGCGGTGATTTGGTTAGGGAGTGCTGGTATGGATTGAAATTTTGTTTTGTTTTGTTGGCTGAAATTGTAAAGGATAAAAATTCAGCTTCTGGTTGTTTGGCGTACCCATTGTATGTGTTGTGAGAGCTTGGTCTTAGAGATGGAATTTGTCAATGGGGGAAAAATCTAGGGAAAGATGAATCCTGCTGGCGAATTGTTGTTTGAAAATGGGGAATTTCAAGCTATTGGGTTGGAAACTTGTGATTAAGGTGCTTTGCAATTTCTCAATCATCATAAGGTTTGGTGGATATTTAAAATGATTTTTGATTTTGTAGAGAACTAATTTGAGATCATAAATGGTTTATCTATGTTTGATATACATAGCGAAGAAGCGATGCTATTTTGGTTTATGCCCTAGTGTTAAAATCCAGTCATAGTTGAACTGTGACTTAACATTATGAAAAATGTATCTCCATTAGTAATTGAAGAATTCCCTCACGAGATCATTGATCAGTCATTACTTATGAAAAGTATGAGATAGAGGGTGATTTTGTTACTTGGAAACATCAAAATTTGATGTTGATGGTTAATTAATTTTTTGTTCTACAAGTGAACAGGGAAATGTGATCAATGATATTGAAGCAAAAGGATTCAATCCAGCACTAATAGTACTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTAGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCCAAAAAGAAGATGAAGAGGGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAAAAAAACAGAAAAGAAAAATGATAAAAAAAAAAATTTAACTTCCCGAGGTTTCCTTCTCTGTAGAACGCTTTGTTTTTCAAAGTTTTTCCTACATAGACTGCCTAGAAAGTTGTTTAACAGTTTTATTTATTTTATCTGCTGTCTTAGAACTCTTCAGAAATGGAACTTGATTTGTGAGTTTTAAACTCATATTACTTGGGCTCTTTTCTCAAGGTACCATTGACTCTTCGCTACTTATTATTCCTCCTGTTCTCTCTTGGGTACACACCAGAAAGTTTTATGTTTCTCCATCTTTAAGTAGCCTTAACTCAATCCTTTTTACTGTTAGCGTCTTCTCTTCTTTTTTTTTTTTTTTTGGACTTTAAATCTTTCAATAAAGGTGGGGATAGCTAGATTCTAGACTTTAGAGATCAGGAGAGAGATTGCACTGCATGGCATGGAGCATACTTTAAAAATAGATTGAGATTCACCTACATTAGTTTAGGGTCCCAAATTATAATGTGAACAAAAAGAGTTTGATGTCATACGGGAGTAATAGAAATTATCCGGCATGATTGAGTGTGTGAAATTCTGTGTTAAGGAAGATTTCAAAGACACTCATTTCTGAACAGGAATAGACTCACTCACAAATTTGTGACAAGAAACATGTTAGTCAACTAGGGAAAAGACATGTTTTTATGGGGGGCAATACTTATTTGAATATCACGTGGAACACTAGAGAACATTGAAGCTGAGAAAAGGGTTTACCTTTAACTGAAGGAAGTAAGTCATCTTTTGTCCCCTCTCTGTATTTTTATGGGATTCATTGTTTTCAAGTCACCATCAACATAATTGTGGATTCTGTCCAAACAGGCAAATGTTGATATAAAACACTCAGCTTTTAGCCTTTTGCTTATTTTGTTTTGTTGGCTTTTAGTTCACTTGCTTGCATTGCTATACTCCTCAGGCAACTCAGTATCTTTTTGTTATGGGCAAAAGCTACCCATTTTGCTTTTTTTTCTTTTTTTCCTTTTTTTAATTATTATATTACTTCTGCCAAACAAACAGCACCACTCTTTAAATTTCTGTTTATTGGATTTTGTTTTGTTGGAATTTGATAGCAACTAAATTCTCTTCTCTTCTCTTCTCTGTTACATATTTACAATCTCTGTCTTGTTTAAGTTGGAAGAAACAAGATAACACTAACTAGTGTAGTCTATCAGAGGCAATTCAAGACAATAATTAGTATCTTATCAACATAGTTACGTCTGAATTGACAAACATGTTCTTATTACATGTTTTTCAGTTTATCAATTGTATTAGTGGAGAATATGTATTTATTTATGAAGACAGGTTTACATTTACAGTCAAATACTTGTACTTCAATTGTAAGACTAGAATTCAAAGGGGGCACACAATTGCCTTCGAATTGCTTAAAACATAGCACTAATGATTAGTAAGTAGAAAATTGAATCAAAATGTGTAAAAATAAAAAGAGAAAAGAAAGTGAAATAATAATAGAAAAGAGGAAAAATGAAGCATTGAGTGAAGAAGAAGGAAGAGGAAAGAAAGAGTGTTAAGGAGACAAGACATGTGAAGGAAACAAATGAAAAATGTAATAAAAGGGAAGGTGGGTCAGTCAGAGAATACACACACACACTCTCTCTCTCATTTTCCACTCAATTTAATAATATCAAAAGTATACAAATAAATTAATAAATTCAGTCAGAGTATCCAAAGATGCTTTATTTAAATTTCCCCATTCCATCGCTCCTAGAAGTTACAACCTCACAACAACAACAACTTGTAAAATAACCAAAACCAAAACGAACATTTAATTCAATTTCCAATCCGAAAAACCAAAATTGCAAATTTGGTTTTTATCATTTCAAAAAACTCAAGACTTTAGGTTTTGTACCAACTTTATTAAAAACCAAAATTGCAATTTGACACCCCAAAAAAAAAAAACTTTTTGAAACTAAAAGAAATAAACTAAAAAAGCCAAAAGTTATTGTATGTGTCTGAAAAAGTGTATATTAATGGTGCCATGGCAATGCATGTACATAAAGAAGAAAGAGGGCATTAAATATGGAAGCTCTAGATTTTCATGGGCAAATAAGATTAACAAATTTTCACAATTTCTTCATCACAACTTCTTTTTTCTTCTTTGCTATGGAGATTCTCTACCATAGCTTCAGAGATAGAGAAATTTATACAGAACTTAAAATGAAAAAAGAAAAAGAAAATTTATGAATATTGAAGTAAGAATAAGAAGAAGAAGAAGAAGAAGAA

mRNA sequence

ATTACGATCAATTAAGCGGCCCATAGAAAGCGCAGGAACTCGGTTGGACCAAAATCGCCGATTTATATGAATCTTCATCTTTTGTTCTTAGATCTCTCTGACATTTTCATTATCGTCAACCCTTTGCCATCGATCTCATCCCTACAATTGCCGGTATTCTGGATCTTCTTGCCGGTCGATCTACCCGGCTCTGAGTCATAGCATGGCTTCAGCCAATGGCAAGGGAAATGTGATCAATGATATTGAAGCAAAAGGATTCAATCCAGCACTAATAGTACTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTAGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCCAAAAAGAAGATGAAGAGGGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAAAAAAACAGAAAAGAAAAATGATAAAAAAAAAAATTTAACTTCCCGAGGTTTCCTTCTCTGTAGAACGCTTTGTTTTTCAAAGTTTTTCCTACATAGACTGCCTAGAAAGTTGTTTAACAGTTTTATTTATTTTATCTGCTGTCTTAGAACTCTTCAGAAATGGAACTTGATTTGTGAGTTTTAAACTCATATTACTTGGGCTCTTTTCTCAAGGTACCATTGACTCTTCGCTACTTATTATTCCTCCTGTTCTCTCTTGGGTACACACCAGAAAGTTTTATGTTTCTCCATCTTTAAGTAGCCTTAACTCAATCCTTTTTACTGTTAGCGTCTTCTCTTCTTTTTTTTTTTTTTTTGGACTTTAAATCTTTCAATAAAGGTGGGGATAGCTAGATTCTAGACTTTAGAGATCAGGAGAGAGATTGCACTGCATGGCATGGAGCATACTTTAAAAATAGATTGAGATTCACCTACATTAGTTTAGGGTCCCAAATTATAATGTGAACAAAAAGAGTTTGATGTCATACGGGAGTAATAGAAATTATCCGGCATGATTGAGTGTGTGAAATTCTGTGTTAAGGAAGATTTCAAAGACACTCATTTCTGAACAGGAATAGACTCACTCACAAATTTGTGACAAGAAACATGTTAGTCAACTAGGGAAAAGACATGTTTTTATGGGGGGCAATACTTATTTGAATATCACGTGGAACACTAGAGAACATTGAAGCTGAGAAAAGGGTTTACCTTTAACTGAAGGAAGTAAGTCATCTTTTGTCCCCTCTCTGTATTTTTATGGGATTCATTGTTTTCAAGTCACCATCAACATAATTGTGGATTCTGTCCAAACAGGCAAATGTTGATATAAAACACTCAGCTTTTAGCCTTTTGCTTATTTTGTTTTGTTGGCTTTTAGTTCACTTGCTTGCATTGCTATACTCCTCAGGCAACTCAGTATCTTTTTGTTATGGGCAAAAGCTACCCATTTTGCTTTTTTTTCTTTTTTTCCTTTTTTTAATTATTATATTACTTCTGCCAAACAAACAGCACCACTCTTTAAATTTCTGTTTATTGGATTTTGTTTTGTTGGAATTTGATAGCAACTAAATTCTCTTCTCTTCTCTTCTCTGTTACATATTTACAATCTCTGTCTTGTTTAAGTTGGAAGAAACAAGATAACACTAACTAGTGTAGTCTATCAGAGGCAATTCAAGACAATAATTAGTATCTTATCAACATAGTTACGTCTGAATTGACAAACATGTTCTTATTACATGTTTTTCAGTTTATCAATTGTATTAGTGGAGAATATGTATTTATTTATGAAGACAGGTTTACATTTACAGTCAAATACTTGTACTTCAATTGTAAGACTAGAATTCAAAGGGGGCACACAATTGCCTTCGAATTGCTTAAAACATAGCACTAATGATTAGTAAGTAGAAAATTGAATCAAAATGTGTAAAAATAAAAAGAGAAAAGAAAGTGAAATAATAATAGAAAAGAGGAAAAATGAAGCATTGAGTGAAGAAGAAGGAAGAGGAAAGAAAGAGTGTTAAGGAGACAAGACATGTGAAGGAAACAAATGAAAAATGTAATAAAAGGGAAGGTGGGTCAGTCAGAGAATACACACACACACTCTCTCTCTCATTTTCCACTCAATTTAATAATATCAAAAGTATACAAATAAATTAATAAATTCAGTCAGAGTATCCAAAGATGCTTTATTTAAATTTCCCCATTCCATCGCTCCTAGAAGTTACAACCTCACAACAACAACAACTTGTAAAATAACCAAAACCAAAACGAACATTTAATTCAATTTCCAATCCGAAAAACCAAAATTGCAAATTTGGTTTTTATCATTTCAAAAAACTCAAGACTTTAGGTTTTGTACCAACTTTATTAAAAACCAAAATTGCAATTTGACACCCCAAAAAAAAAAAACTTTTTGAAACTAAAAGAAATAAACTAAAAAAGCCAAAAGTTATTGTATGTGTCTGAAAAAGTGTATATTAATGGTGCCATGGCAATGCATGTACATAAAGAAGAAAGAGGGCATTAAATATGGAAGCTCTAGATTTTCATGGGCAAATAAGATTAACAAATTTTCACAATTTCTTCATCACAACTTCTTTTTTCTTCTTTGCTATGGAGATTCTCTACCATAGCTTCAGAGATAGAGAAATTTATACAGAACTTAAAATGAAAAAAGAAAAAGAAAATTTATGAATATTGAAGTAAGAATAAGAAGAAGAAGAAGAAGAAGAA

Coding sequence (CDS)

ATGGCTTCAGCCAATGGCAAGGGAAATGTGATCAATGATATTGAAGCAAAAGGATTCAATCCAGCACTAATAGTACTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTAGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCCAAAAAGAAGATGAAGAGGGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Protein sequence

MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE*

Homology

[Close]

BLAST of CsGy3G030790 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.5e-24
Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 11 INDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLK 70
          +N++EAKG NP LIVLL++GGLLL FLVGN+ LY YAQKNLPPKKKKP+SKKKMKRERLK
Sbjct: 3  VNEVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLK 62

Query: 71 QGVSAPGE 79
          QGV+ PGE
Sbjct: 63 QGVAPPGE 70

[Close]

BLAST of CsGy3G030790 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-21
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 14 IEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 73
          IE+KG NP LIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 74 SAPGE 79
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of CsGy3G030790 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 6.8e-21
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 15 EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 74
          EAKG NP LIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 75 APGE 79
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of CsGy3G030790 vs. ExPASy Swiss-Prot
Match: Q42337 (DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 6.8e-21
Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          M+S    G  +  +EAKG NP LIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+S
Sbjct: 1  MSSDGSAGKAV--VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLS 60

Query: 61 KKKMKRERLKQGVSAPGE 79
          KKK+KRE+LKQGV  PGE
Sbjct: 61 KKKLKREKLKQGVPVPGE 76

[Close]

BLAST of CsGy3G030790 vs. ExPASy Swiss-Prot
Match: Q7XLX6 (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-20
Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 0


Query: 4  ANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKK 63
          A+   NV+ +   KG NP +IVL++V   LL+F VGNYALY+YAQK LPP+KKKPVSKKK
Sbjct: 6  ADSANNVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKK 65

Query: 64 MKRERLKQGVSAPGE 79
          MKRE+LKQGVSAPGE
Sbjct: 66 MKREKLKQGVSAPGE 80

[Close]

BLAST of CsGy3G030790 vs. NCBI nr
Match: XP_004137812.1 (DNA-binding protein S1FA [Cucumis sativus])

HSP 1 Score: 148 bits (373), Expect = 1.22e-44
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. NCBI nr
Match: XP_038905724.1 (DNA-binding protein S1FA-like [Benincasa hispida])

HSP 1 Score: 147 bits (372), Expect = 1.74e-44
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVIND+EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. NCBI nr
Match: XP_008442666.1 (PREDICTED: DNA-binding protein S1FA-like [Cucumis melo])

HSP 1 Score: 145 bits (367), Expect = 1.01e-43
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVIND+EAKGFNPALIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. NCBI nr
Match: XP_022934038.1 (DNA-binding protein S1FA-like [Cucurbita moschata] >XP_022983622.1 DNA-binding protein S1FA-like [Cucurbita maxima] >XP_023526308.1 DNA-binding protein S1FA-like [Cucurbita pepo subsp. pepo] >KAG6580595.1 DNA-binding protein S1FA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (363), Expect = 4.11e-43
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVIND+EAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKR+RLKQGVSAPGE
Sbjct: 61 KKKMKRDRLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. NCBI nr
Match: XP_023005220.1 (DNA-binding protein S1FA-like isoform X1 [Cucurbita maxima] >XP_023539625.1 DNA-binding protein S1FA-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6596464.1 DNA-binding protein S1FA2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028009.1 DNA-binding protein S1FA2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141 bits (355), Expect = 6.83e-42
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNV+ND+ AKGFNP L+VLLLVGGLLLIFL+GNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVMNDVAAKGFNPGLMVLLLVGGLLLIFLIGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. ExPASy TrEMBL
Match: A0A0A0LAW3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1)

HSP 1 Score: 148 bits (373), Expect = 5.92e-45
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. ExPASy TrEMBL
Match: A0A1S3B680 (DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1)

HSP 1 Score: 145 bits (367), Expect = 4.88e-44
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVIND+EAKGFNPALIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. ExPASy TrEMBL
Match: A0A6J1IZV9 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111482175 PE=3 SV=1)

HSP 1 Score: 144 bits (363), Expect = 1.99e-43
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVIND+EAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKR+RLKQGVSAPGE
Sbjct: 61 KKKMKRDRLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. ExPASy TrEMBL
Match: A0A6J1F6J1 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111441328 PE=3 SV=1)

HSP 1 Score: 144 bits (363), Expect = 1.99e-43
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNVIND+EAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKR+RLKQGVSAPGE
Sbjct: 61 KKKMKRDRLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. ExPASy TrEMBL
Match: A0A6J1KWU8 (DNA-binding protein S1FA-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498311 PE=3 SV=1)

HSP 1 Score: 141 bits (355), Expect = 3.31e-42
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          MASANGKGNV+ND+ AKGFNP L+VLLLVGGLLLIFL+GNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVMNDVAAKGFNPGLMVLLLVGGLLLIFLIGNYALYLYAQKNLPPKKKKPVS 60

Query: 61 KKKMKRERLKQGVSAPGE 78
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CsGy3G030790 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-22
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 14 IEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 73
          IE+KG NP LIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 74 SAPGE 79
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of CsGy3G030790 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 100.9 bits (250), Expect = 4.8e-22
Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60
          M+S    G  +  +EAKG NP LIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+S
Sbjct: 1  MSSDGSAGKAV--VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLS 60

Query: 61 KKKMKRERLKQGVSAPGE 79
          KKK+KRE+LKQGV  PGE
Sbjct: 61 KKKLKREKLKQGVPVPGE 76

[Close]

BLAST of CsGy3G030790 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 100.9 bits (250), Expect = 4.8e-22
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 15 EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 74
          EAKG NP LIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 75 APGE 79
           PGE
Sbjct: 73 VPGE 76

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BLAST of CsGy3G030790 vs. TAIR 10
Match: AT3G53370.2 (S1FA-like DNA-binding protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-08
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 46 YAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE 79
          +A KNLPP+KKKPVSKKK+KRE+LKQGV  PGE
Sbjct: 6  FAGKNLPPRKKKPVSKKKLKREKLKQGVPVPGE 38

The following BLAST results are available for this feature:

BLAST of CsGy3G030790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42552	8.5e-24	79.41	DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1	[more]
Q93VI0	4.0e-21	76.92	DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1	[more]
P42551	6.8e-21	78.13	DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2	[more]
Q42337	6.8e-21	64.10	DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2	[more]
Q7XLX6	2.0e-20	68.00	DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3...	[more]

BLAST of CsGy3G030790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137812.1	1.22e-44	100.00	DNA-binding protein S1FA [Cucumis sativus]	[more]
XP_038905724.1	1.74e-44	98.72	DNA-binding protein S1FA-like [Benincasa hispida]	[more]
XP_008442666.1	1.01e-43	97.44	PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]	[more]
XP_022934038.1	4.11e-43	96.15	DNA-binding protein S1FA-like [Cucurbita moschata] >XP_022983622.1 DNA-binding p...	[more]
XP_023005220.1	6.83e-42	92.31	DNA-binding protein S1FA-like isoform X1 [Cucurbita maxima] >XP_023539625.1 DNA-...	[more]

BLAST of CsGy3G030790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAW3	5.92e-45	100.00	DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1	[more]
A0A1S3B680	4.88e-44	97.44	DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1	[more]
A0A6J1IZV9	1.99e-43	96.15	DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111482175 PE=3 S...	[more]
A0A6J1F6J1	1.99e-43	96.15	DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111441328 PE=3...	[more]
A0A6J1KWU8	3.31e-42	92.31	DNA-binding protein S1FA-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of CsGy3G030790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09735.1	2.8e-22	76.92	S1FA-like DNA-binding protein	[more]
AT2G37120.1	4.8e-22	64.10	S1FA-like DNA-binding protein	[more]
AT3G53370.1	4.8e-22	78.13	S1FA-like DNA-binding protein	[more]
AT3G53370.2	3.0e-08	78.79	S1FA-like DNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006779	DNA binding protein S1FA	PFAM	PF04689	S1FA	coord: 14..78 e-value: 1.8E-39 score: 133.7
IPR006779	DNA binding protein S1FA	PANTHER	PTHR35298	DNA-BINDING PROTEIN S1FA2	coord: 6..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68
None	No IPR available	PANTHER	PTHR35298:SF9	DNA-BINDING PROTEIN S1FA1-RELATED	coord: 6..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G030790.2	CsGy3G030790.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding