CsGy3G030050 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G030050
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein FAR-RED ELONGATED HYPOCOTYL 1
Location	Gy14Chr3: 30218938 .. 30221325 (+)
RNA-Seq Expression	CsGy3G030050
Synteny	CsGy3G030050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTTAACATTATCCTCCGGATTTAGGAAAGTAGCTTTCAACAGTTTTATCCATTTAAACTTTCTTAGAAGAAAGAGAAAGAAACAAAGGTAAAGAGCAGTGATGAGAGGGATGGGATGGGATTGGGGAGGACGACGATGAACGAAGCAACTTCCTCGTGCCACCCACGTGAACCCGAAATGGACGTGTCTCAATCTCACTCGTTGGTGCCCAACTTTTGTTCCCCATTTTCTCCTTTTCTTCTGGGTCTCATTTCATTTGAAAGCGCACCCAAACAGGATTATCCTCTGGATTTCATTTCTGGGTTTAGGGGCTTGGATTTGTGTCTCTGCTTCTGATTGGTTTTCTCGTCTTCTGGGCTTCAGAATGGAGGAGAAGGAGCAGAACCCAGCTGAGATCAACAGGTTTTCCATCTGGGTTTTCAAGATTCTTCTACTGTCTTTCAGTTTTCGAATCTGTTTCTTCTACTGTTTTAACTAGACTTTACTCTTCCTTTTTTCTTTTTTCTTTCTTTTTTTTGTTTGATTGAGTGATGTTTCTAGTAGGTTTTGTTCTTTTGTTGGTTTAATTACTGAAATCGTGGATGTGGATGAAGATGGGGTACTTTTCTAGTAAAGAACAATCTTGATCCGCGTCATACTAAATTAAGGAAGTTTGATTTCTTTCCTTTTTTAAAGTTTCAATCTCTTGGTGGGATCTGCGATTTTGCCTTTACTGGTATGGATAAACTTATTAGCTATTTTAATTATCTAGAATACAAATTGGGAAACTAGAAGACTGGAAACGCATCCTAACAATTGGATTTCCATGAATTACAAACCCCTTTTGGGAAGAGATTGCATCCAGCCAAACTGTTGATCAAACTCATGTTTAAAATTTTATTAGACCTTGTTTTCATGTTTTCGTTGCAGGAACCCTTTGGATTATCAAACTCTGACCCGAATATGTATTGTTTTCGGTTTTTACTGTTATTATGATTTGTGTTTGTCATTTTATTGGATTTCATATGTTCCCAGTTCTTGAATTTCTCACAAGGTATTATCGTGAAGTAATTTTGTGAGAGTTCGAAGATTTATCTATTGTAGTTCTTGTCTTTCATTTGAACTAATGGAAGATTGCCGCTTTTTTTTTTTCCGTCTCTTAACTGATGAATCATGTCGTTTTCTAATTTTTTGCAGCTTCTATGTAATTTCTAAGCTTAGGTCAAACCCGTTTGACTTGAACAAGAAAAGAAAGCTACCAGCTGAACATTTGGGCTTGCCTTCACCAAAACACAAACACTGCAGTGAAGGATTCGCTTCTAAATCTGCTTTTCTGTATGGTGGGTTACCCGAAACCGAGCACATGAACGTACAATTCATAAAGGAGAATGCCAATGTACTGTGTTTTGACGAGGTGTCGAGGCCAGAATCGGTAAAAGATAGCAATAGCTTGAGTGAAGAGTCTGATTCTGCAACATCCGTATTTCATGGCGCAAAATTTGAACTGAACCAGGCTATAACTTGCACACACGACACTTCTACCACACGATCTATGAGTTTTGGTGGGGCACGTTCTGAAAGCATCCACTTCTCTGTTGAAAGTTCCACAGCAATGGAATCGAGCTCTACCGAACAGGAAACAGCTTTTCCAAGCGGCGAAAATAGAATGGAAACAATTCAAAAACTTCAGGAGCAGCTACTTGAATTAGATAGCCATGAAGATTATAATTGTGCAGAATATGAAAATGATGACACTAAGCAATGCACAGATCAGGAACTTGAGGAACTTTTCTACTCAAACGGGTTGAATCCAAATACATACATTCTTTCGTCCGGACGATGGGCCATAAACCACGGTAATAAAGACACCATACATAAGATAAGAACTTTTATGAACTGAAGTAAATCTATGTTCAATTGCTTTTTTCTGATCTTCTTGTGTTTGCCATTTACTAAATCACATCCATTCTCTGAATGCAGAGGCTCAATCAAGAGCTAGAGCTCCGACGATTGATCAAGAATTTGAGCAGTACTTTTCTATGCTGATGCTGTAACCTATTTAATGTATATATTTTTATTAATAAATGTGTATATCAGGCTCATCCTTTCTGCTTAGTATTCGTAAGGAATTGTACTGAACTAACATTCGGAAAATTGAGTCGATGGCAATGAGATGTTTGAACTCTAAAGTAAGTTTAATTGTTTATACTAGACAGTGGGTGAAAGAAAGAGATAACAGAGACAGAAGATTGAAGAAATGAAAGAGACAGATTATTCATTTGGAGAATGCATACGCACAAGTAGGGGTTGTTTGTTCTCAAGTATTACATAAAAAGGAAAGATGCGATAGGAAGCCAACTCTGCTACCTTAAACAAAACACACACGAAACAAAGAAAAGAATGGGC

mRNA sequence

TATCTTAACATTATCCTCCGGATTTAGGAAAGTAGCTTTCAACAGTTTTATCCATTTAAACTTTCTTAGAAGAAAGAGAAAGAAACAAAGGTAAAGAGCAGTGATGAGAGGGATGGGATGGGATTGGGGAGGACGACGATGAACGAAGCAACTTCCTCGTGCCACCCACGTGAACCCGAAATGGACGTGTCTCAATCTCACTCGTTGGTGCCCAACTTTTGTTCCCCATTTTCTCCTTTTCTTCTGGGTCTCATTTCATTTGAAAGCGCACCCAAACAGGATTATCCTCTGGATTTCATTTCTGGGTTTAGGGGCTTGGATTTGTGTCTCTGCTTCTGATTGGTTTTCTCGTCTTCTGGGCTTCAGAATGGAGGAGAAGGAGCAGAACCCAGCTGAGATCAACAGCTTCTATGTAATTTCTAAGCTTAGGTCAAACCCGTTTGACTTGAACAAGAAAAGAAAGCTACCAGCTGAACATTTGGGCTTGCCTTCACCAAAACACAAACACTGCAGTGAAGGATTCGCTTCTAAATCTGCTTTTCTGTATGGTGGGTTACCCGAAACCGAGCACATGAACGTACAATTCATAAAGGAGAATGCCAATGTACTGTGTTTTGACGAGGTGTCGAGGCCAGAATCGGTAAAAGATAGCAATAGCTTGAGTGAAGAGTCTGATTCTGCAACATCCGTATTTCATGGCGCAAAATTTGAACTGAACCAGGCTATAACTTGCACACACGACACTTCTACCACACGATCTATGAGTTTTGGTGGGGCACGTTCTGAAAGCATCCACTTCTCTGTTGAAAGTTCCACAGCAATGGAATCGAGCTCTACCGAACAGGAAACAGCTTTTCCAAGCGGCGAAAATAGAATGGAAACAATTCAAAAACTTCAGGAGCAGCTACTTGAATTAGATAGCCATGAAGATTATAATTGTGCAGAATATGAAAATGATGACACTAAGCAATGCACAGATCAGGAACTTGAGGAACTTTTCTACTCAAACGGGTTGAATCCAAATACATACATTCTTTCGTCCGGACGATGGGCCATAAACCACGGTAATAAAGACACCATACATAAGATAAGAACTTTTATGAACTGAAGTAAATCTATGTTCAATTGCTTTTTTCTGATCTTCTTGTGTTTGCCATTTACTAAATCACATCCATTCTCTGAATGCAGAGGCTCAATCAAGAGCTAGAGCTCCGACGATTGATCAAGAATTTGAGCAGTACTTTTCTATGCTGATGCTGTAACCTATTTAATGTATATATTTTTATTAATAAATGTGTATATCAGGCTCATCCTTTCTGCTTAGTATTCGTAAGGAATTGTACTGAACTAACATTCGGAAAATTGAGTCGATGGCAATGAGATGTTTGAACTCTAAAGTAAGTTTAATTGTTTATACTAGACAGTGGGTGAAAGAAAGAGATAACAGAGACAGAAGATTGAAGAAATGAAAGAGACAGATTATTCATTTGGAGAATGCATACGCACAAGTAGGGGTTGTTTGTTCTCAAGTATTACATAAAAAGGAAAGATGCGATAGGAAGCCAACTCTGCTACCTTAAACAAAACACACACGAAACAAAGAAAAGAATGGGC

Coding sequence (CDS)

ATGGAGGAGAAGGAGCAGAACCCAGCTGAGATCAACAGCTTCTATGTAATTTCTAAGCTTAGGTCAAACCCGTTTGACTTGAACAAGAAAAGAAAGCTACCAGCTGAACATTTGGGCTTGCCTTCACCAAAACACAAACACTGCAGTGAAGGATTCGCTTCTAAATCTGCTTTTCTGTATGGTGGGTTACCCGAAACCGAGCACATGAACGTACAATTCATAAAGGAGAATGCCAATGTACTGTGTTTTGACGAGGTGTCGAGGCCAGAATCGGTAAAAGATAGCAATAGCTTGAGTGAAGAGTCTGATTCTGCAACATCCGTATTTCATGGCGCAAAATTTGAACTGAACCAGGCTATAACTTGCACACACGACACTTCTACCACACGATCTATGAGTTTTGGTGGGGCACGTTCTGAAAGCATCCACTTCTCTGTTGAAAGTTCCACAGCAATGGAATCGAGCTCTACCGAACAGGAAACAGCTTTTCCAAGCGGCGAAAATAGAATGGAAACAATTCAAAAACTTCAGGAGCAGCTACTTGAATTAGATAGCCATGAAGATTATAATTGTGCAGAATATGAAAATGATGACACTAAGCAATGCACAGATCAGGAACTTGAGGAACTTTTCTACTCAAACGGGTTGAATCCAAATACATACATTCTTTCGTCCGGACGATGGGCCATAAACCACGGTAATAAAGACACCATACATAAGATAAGAACTTTTATGAACTGA

Protein sequence

MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTHDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHGNKDTIHKIRTFMN*

Homology

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BLAST of CsGy3G030050 vs. NCBI nr
Match: XP_004137783.2 (protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus] >KGN58861.1 hypothetical protein Csa_002447 [Cucumis sativus])

HSP 1 Score: 452 bits (1162), Expect = 6.39e-158
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLY 60
           MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSE FASKSAFLY
Sbjct: 92  MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLY 151

Query: 61  GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 120
           GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI
Sbjct: 152 GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 211

Query: 121 TCTHDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 180
           TCTHDTSTTRSMSFGGA SESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL
Sbjct: 212 TCTHDTSTTRSMSFGGASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 271

Query: 181 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
           LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH
Sbjct: 272 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 323

[Close]

BLAST of CsGy3G030050 vs. NCBI nr
Match: XP_008442533.1 (PREDICTED: uncharacterized protein LOC103486380 [Cucumis melo])

HSP 1 Score: 410 bits (1054), Expect = 5.83e-143
Identity = 209/228 (91.67%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 5   EQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 64
           E+NP EINSFY+ISKL  NP+DLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP
Sbjct: 2   EENPTEINSFYIISKL--NPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 61

Query: 65  ETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 124
           ET HMNVQFIKENANVLCFDE SRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH
Sbjct: 62  ETGHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 121

Query: 125 DTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELD 184
           DTSTT+SMSFGGA SES HFSVESSTAME  STEQETAFPSGENR+ETI KLQE LLELD
Sbjct: 122 DTSTTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELD 181

Query: 185 SHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
            HEDY+CAEYEN DTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH
Sbjct: 182 GHEDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 227

[Close]

BLAST of CsGy3G030050 vs. NCBI nr
Match: KAA0044098.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 [Cucumis melo var. makuwa] >TYK25039.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 410 bits (1054), Expect = 6.07e-142
Identity = 209/228 (91.67%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 5   EQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 64
           E+NP EINSFY+ISKL  NP+DLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP
Sbjct: 68  EENPTEINSFYIISKL--NPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 127

Query: 65  ETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 124
           ET HMNVQFIKENANVLCFDE SRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH
Sbjct: 128 ETGHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 187

Query: 125 DTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELD 184
           DTSTT+SMSFGGA SES HFSVESSTAME  STEQETAFPSGENR+ETI KLQE LLELD
Sbjct: 188 DTSTTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELD 247

Query: 185 SHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
            HEDY+CAEYEN DTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH
Sbjct: 248 GHEDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 293

[Close]

BLAST of CsGy3G030050 vs. NCBI nr
Match: XP_038904937.1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida])

HSP 1 Score: 390 bits (1001), Expect = 8.23e-135
Identity = 200/232 (86.21%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLY 60
           MEEKEQNP EINSFYVISKLR+NPFDLNKKRKL AEHLGLPS KHKHCSEGF SKSAFLY
Sbjct: 1   MEEKEQNPTEINSFYVISKLRTNPFDLNKKRKLQAEHLGLPSAKHKHCSEGFPSKSAFLY 60

Query: 61  GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 120
           GGL ETEHM+ QFIK NANVLCF+E SR ESVKDSNSLSEESDSATSVFHG KFE NQAI
Sbjct: 61  GGLSETEHMDAQFIKGNANVLCFEEGSRLESVKDSNSLSEESDSATSVFHGGKFEPNQAI 120

Query: 121 TCTHDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 180
           TCT+D+STT+SMSFGGA SES HFSVESSTAMESSSTEQE AF SGENR+E+I KLQE L
Sbjct: 121 TCTYDSSTTQSMSFGGASSESTHFSVESSTAMESSSTEQEAAFASGENRIESIHKLQEHL 180

Query: 181 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
           LELDSHEDY+CAEY NDD KQCTDQELEEL YSNGLNP+TYILSSGRW +NH
Sbjct: 181 LELDSHEDYDCAEYGNDDFKQCTDQELEELLYSNGLNPDTYILSSGRWTVNH 232

[Close]

BLAST of CsGy3G030050 vs. NCBI nr
Match: XP_023528627.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366 bits (940), Expect = 1.49e-125
Identity = 187/232 (80.60%), Postives = 208/232 (89.66%), Query Frame = 0


Query: 1   MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLY 60
           MEEK+QNPAEINSFYVISKL++NPFDLNKKRKLPAEHLGLPSPKHKHC+EGF SK AFLY
Sbjct: 1   MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 60

Query: 61  GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 120
            GLPETEHMNVQFIK +ANVL FD+ S PES KDSNS  EESDSATSVFHGAKFELNQA 
Sbjct: 61  NGLPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA- 120

Query: 121 TCTHDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 180
            CT+D+S+T+ MSFGGA SE+ HFSVESSTAMESSSTEQE AF SGENR+ET+ K+QE L
Sbjct: 121 -CTYDSSSTQCMSFGGASSENTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHL 180

Query: 181 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
           LELDS EDY+ AEY +D+T+QCTDQELE+LFYSNGL+PN YILSSGRW +NH
Sbjct: 181 LELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNH 230

[Close]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL
Match: A0A0A0LFJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734140 PE=4 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 3.09e-158
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLY 60
           MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSE FASKSAFLY
Sbjct: 92  MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLY 151

Query: 61  GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 120
           GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI
Sbjct: 152 GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 211

Query: 121 TCTHDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 180
           TCTHDTSTTRSMSFGGA SESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL
Sbjct: 212 TCTHDTSTTRSMSFGGASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 271

Query: 181 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
           LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH
Sbjct: 272 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 323

[Close]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL
Match: A0A1S3B5W9 (uncharacterized protein LOC103486380 OS=Cucumis melo OX=3656 GN=LOC103486380 PE=4 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 2.82e-143
Identity = 209/228 (91.67%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 5   EQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 64
           E+NP EINSFY+ISKL  NP+DLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP
Sbjct: 2   EENPTEINSFYIISKL--NPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 61

Query: 65  ETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 124
           ET HMNVQFIKENANVLCFDE SRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH
Sbjct: 62  ETGHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 121

Query: 125 DTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELD 184
           DTSTT+SMSFGGA SES HFSVESSTAME  STEQETAFPSGENR+ETI KLQE LLELD
Sbjct: 122 DTSTTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELD 181

Query: 185 SHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
            HEDY+CAEYEN DTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH
Sbjct: 182 GHEDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 227

[Close]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL
Match: A0A5A7TMJ2 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001600 PE=4 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 2.94e-142
Identity = 209/228 (91.67%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 5   EQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 64
           E+NP EINSFY+ISKL  NP+DLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP
Sbjct: 68  EENPTEINSFYIISKL--NPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 127

Query: 65  ETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 124
           ET HMNVQFIKENANVLCFDE SRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH
Sbjct: 128 ETGHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 187

Query: 125 DTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELD 184
           DTSTT+SMSFGGA SES HFSVESSTAME  STEQETAFPSGENR+ETI KLQE LLELD
Sbjct: 188 DTSTTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELD 247

Query: 185 SHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
            HEDY+CAEYEN DTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH
Sbjct: 248 GHEDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 293

[Close]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL
Match: A0A6J1F8W9 (uncharacterized protein LOC111441892 OS=Cucurbita moschata OX=3662 GN=LOC111441892 PE=4 SV=1)

HSP 1 Score: 365 bits (938), Expect = 1.45e-125
Identity = 187/232 (80.60%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 1   MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLY 60
           MEEK+QNPAEINSFYVISKL++NPFDLNKKRKLPAEHLGLPSPKHKHC+EGF SK AFLY
Sbjct: 1   MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 60

Query: 61  GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 120
            G PETEHMNVQFIK +ANVL FD+ S PES KDSNS  EESDSATSVFHGAKFELNQA 
Sbjct: 61  DGFPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA- 120

Query: 121 TCTHDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 180
            CT+D+S+T+ MSFGGA SES HFSVESSTAMESSSTEQE AF SGENR+ET+ K+QE L
Sbjct: 121 -CTYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHL 180

Query: 181 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
           LELDS EDY+ AEY +D+T+QCTDQELE+LFYSNGL+PN YILSSGRW +NH
Sbjct: 181 LELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNH 230

[Close]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL
Match: A0A6J1J862 (protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Cucurbita maxima OX=3661 GN=LOC111482155 PE=4 SV=1)

HSP 1 Score: 350 bits (897), Expect = 2.43e-119
Identity = 181/230 (78.70%), Postives = 202/230 (87.83%), Query Frame = 0


Query: 3   EKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGG 62
           EK QNPAEINSFYVISKL++NPFDLNKKRKLPAEHLGLPS KHKHC+EGF SK AFLY G
Sbjct: 2   EKNQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSSKHKHCNEGFPSKLAFLYNG 61

Query: 63  LPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITC 122
           LPETEHMNVQFIK +ANVL FD+ S PES KDSNS  EESDSATSVFHGAKFELNQA  C
Sbjct: 62  LPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA--C 121

Query: 123 THDTSTTRSMSFGGARSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLE 182
           T+D+S+T+ MSFGGA S S +FSVESSTAMESSSTEQE AF SGENR+ET+ K+QE LLE
Sbjct: 122 TYDSSSTQCMSFGGASSGSTNFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 181

Query: 183 LDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINH 232
           LDS E Y+ AEY +D+T+QCTDQELE+LFYSNGL+PN YILSSGRW +N+
Sbjct: 182 LDSREGYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNN 229

The following BLAST results are available for this feature:

BLAST of CsGy3G030050 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G030050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137783.2	6.39e-158	99.14	protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus] >KGN58861.1 hypothetical...	[more]
XP_008442533.1	5.83e-143	91.67	PREDICTED: uncharacterized protein LOC103486380 [Cucumis melo]	[more]
KAA0044098.1	6.07e-142	91.67	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 [Cucumis melo var. ma...	[more]
XP_038904937.1	8.23e-135	86.21	protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]	[more]
XP_023528627.1	1.49e-125	80.60	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFJ8	3.09e-158	99.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734140 PE=4 SV=1	[more]
A0A1S3B5W9	2.82e-143	91.67	uncharacterized protein LOC103486380 OS=Cucumis melo OX=3656 GN=LOC103486380 PE=...	[more]
A0A5A7TMJ2	2.94e-142	91.67	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 OS=Cucumis melo var. ...	[more]
A0A6J1F8W9	1.45e-125	80.60	uncharacterized protein LOC111441892 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]
A0A6J1J862	2.43e-119	78.70	protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Cucurbita maxima OX=3661 GN=LOC11148215...	[more]

BLAST of CsGy3G030050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..166
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 1..239
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 1..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G030050.2	CsGy3G030050.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051457	maintenance of protein location in nucleus
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus