CsGy3G030000 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G030000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type E3 ubiquitin transferase
Location	Gy14Chr3: 30202284 .. 30205288 (+)
RNA-Seq Expression	CsGy3G030000
Synteny	CsGy3G030000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCTCTTTCTGTTGTATGATAATTCTTAAGGAACTCGTATGTTCTCTCTCACTGCCTTCTTTTTCAGCTGTTACTTCTTTTACTTTCTTCACTTGAAATTTATAGCTTCTCTCACAAATTTGAGCTCATTCAAGCATGAAAATTACACCCATCCCGCACCATATTTCGATCCCTGAAGGAGGATCCATACCCTTCTAAGGAGGGTAGATTGACAAAGCTGATAGGGTGAGACAATTTAATAACTCAGGTTAGATGAATTATACATTGAAGAAGTCTCATCCAGGGCCAGTGCTTTGTTTATAGCAAGATGATTAATATGTTGCTATCAAAACTTTACTGGTGCACTAGAAAAAAACTCTTGGCCCTTGAAAATAGGCTTTTACTAGTTTTAGCTTTATTGCACATTTGTATGTCAACCACGAACACCATTTTTCTTACTTGATGCATGTGCAACTTTAGCAGCTTTCTTAGTTCATATCAAAGCAAACGTACCTTTATTCCTATAGTAATTCCTTTTCTGCTTTCCTCTTTTATTAATTGTCAAAAATATGGACAGGAAAGTGAGCTGAGCACCAACAGGTTGTACCCCTTTTTCCATGTCTTGAAAATGAACTACCAGGACACACATCAGATGATGATTGTTGGGAGAAGGAATGTAAGATTATTCGTTCTGTTTGATGTAAGAGATGTAAGCTCACATGTCTTGCAACTTTTTTAAATTTGTGTGTCGCATATGTGCAGATTCCTGTATGAGAGTCATGTCACTAGTGGCATTTGTATGCTACAATTGTTGAATTTTTGTATTATTCTCTTAAAAGGAAATGACAAAAGGTATAATCAAACCAAGCTGAACCCAAAAGAAGGTCTGGTTCTTTGTATTATGCATGAAGAAGGCTTTTCATGTCTCTTCTGCCATTTGGATTTTGTTTGTGACAAGGGACTAGACACTACACATGATGCTGGAATGGAAACTGCAAGAGTATTTTTACCCTAATAAGATTAAAACTTGAAAATCAATTAGATTTTCAGGCACGTCTGTCGTATTGTCTTTCTGTGTGTTCCATGTTTCTTTTTCTAAAAAAATATTTTAATATCTTTTTTTTTAAGGGTGAGAAGGGATTGCACAAATATAGGTGATACATTTATACTTTTGCCCAAGTAAGATTAGAAACGAGAAGAGAAAAATATACATGTGTCAGTAATGTCCATTTTTTTCAGTTCTCTATTTCTTTTTTTCATCAACTTTAACAGGGCAACAATTAACCACAGCAAACCAACTAAGTACCTCTCCTCATCATCTAATAATATCTAAAAAGAATACAAATGAACGATTCTAAGAGCCAAACTATGTAGTGCTATAACATCAGCACATTTGTTCTATTCTTAGTTCACCAGAATGTGACTAACTGTTTTGCATTGTAATATGAATTTGAAAGTTTGAGATTCCTTATACGAAGACCTTTTCTCATATATCTAAGAACACGAGAACCACCAAAATGAGAAAAGAGTTAGTCCAAGCCAAAACGATTTTGACTCCATGAAAATCCAGACGGTGGGGCATCCTTATCTTAACAATCACAACCTGAAGTCCGACGTAGCCTTATCCACATTTCAATTTCAACAACACACACTCTCTCTCTATCCTTCCGACCACCAAAATATAAGAAAATTTTTCTTCCTCATCCTCCTCCAACCCAAAATTTAGCTTCAATTTCATTCCTCTGTAAAACCATGGCATCTCTGTGTTCATTTCCGCGCATTTCCTCCACAGAACCCATCAAACAATCGCCCGCCGTCGCCCCTTTTCCGCCCTCCAACCACCCAATAAAACCGTCCACCCTATCCCTCCGCCAAAGCAGCCGCAATCACAAGAGAATTTCCACAGTGGTCGCCGCCGTTGGAGACGTCTCCTCCGACGGCACCACATACTTGATCGCCGGCGCCATTGCTGTGGCTCTCGTCGGTACCGCCTTCCCCATCCTCTTCTCTCGCAAAGACCTGTAAGCAAAATTTAATCGACAAATTCAGTTTATTACCGTAAAATTTTGCTTGTCTGCAGTGGGATTCTGCTTCAGGAATTGAAATTACCCTTTTTGTCCTCCGTAGGTGTCCGGAATGCGACGGTGCAGGGTTTGTCCGGCGATCGGAGTCGGCGCTGAGGGCAAATGCGGCTCGCAAAGATCAAACTCAGATCGTTTGTGCTCGTTGTAATGGGCTTGGCAAGCTCAACCAAGTGGACAAATAGATTAAAACCTGCCTTTTCTTTTTCCCTTCCGTAAATTACATTATTATTTATAAATGTGAATGTAATAAAATATGTTTCTACTCCATGGATTTTGAGACTTAATATTATAAATTCTCGGAGATGAAGAATGTTGTTGATCAGAGTGGTGCTTTGGTGAGATTCGTCTCTCTCTCTGTTTTTCCATATTGTCATCGAATTGCTCGTTGTGCTGTTCATTATATGTCGTTTGTTTTAGAAAGAAAAAAAAAGCTAAAGAAAACTGCACCGAATAACGAGTACCAACGATGCAAAAGACTCTCAATCCTGCGAAGTTTTATACATGCCAAAGCAATCATGAGAAAAAGAGACATCCCTCAACTTCCCACCTTCAACTTTAGCTTCCTTAGTCAAAGAAAAAACTAGATAAATCAACAAATTGATGACCTCCAAGTAATCAGACTCAACCAAGATATCAATGGTAGACATAATCTCAAGCATAAAACAAACCATATAGGTTGAATCTCCTTGTAAGAGAATGAGAACAGCCCCTTCCCAGAACGAGGTTTACAGGCTGGACATTCTGAAGGAAGGGAAGTGAGTAGCAAGATGAAACTTCAAGGATCTCACCTTCTAGTGTCTTGGGACAAACCTAAAGTTTGCCATTCAAATATGATCCCAAGTGGTCACAATAATAATAATACCAAAGACTAAAATGAGTATTTAGTAAGAAATTTGTGGTTAAGAGTGTAATTGTATATCAGATTGAAACAAATTTCAAA

mRNA sequence

TATTCTCTTTCTGTTGTATGATAATTCTTAAGGAACTCGTATGTTCTCTCTCACTGCCTTCTTTTTCAGCTGTTACTTCTTTTACTTTCTTCACTTGAAATTTATAGCTTCTCTCACAAATTTGAGCTCATTCAAGCATGAAAATTACACCCATCCCGCACCATATTTCGATCCCTGAAGGAGGATCCATACCCTTCTAAGGAGGGTAGATTGACAAAGCTGATAGGGTGAGACAATTTAATAACTCAGGTTAGATGAATTATACATTGAAGAAGTCTCATCCAGGGCCAGTGCTTTGTTTATAGCAAGATGATTAATATGTTGCTATCAAAACTTTACTGGTGCACTAGAAAAAAACTCTTGGCCCTTGAAAATAGGCTTTTACTAGTTTTAGCTTTATTGCACATTTGTATGTCAACCACGAACACCATTTTTCTTACTTGATGCATGTGCAACTTTAGCAGCTTTCTTAGTTCATATCAAAGCAAACGTACCTTTATTCCTATAGTAATTCCTTTTCTGCTTTCCTCTTTTATTAATTGTCAAAAATATGGACAGGAAAGTGAGCTGAGCACCAACAGGTTGTACCCCTTTTTCCATGTCTTGAAAATGAACTACCAGGACACACATCAGATGATGATTGTTGGGAGAAGGAATGTAAGATTATTCGTTCTGTTTGATGTAAGAGATGTAAGCTCACATGTCTTGCAACTTTTTTAAATTTGTGTGTCGCATATGTGCAGATTCCTGTATGAGAGTCATGTCACTAGTGGCATTTGTATGCTACAATTGTTGAATTTTTGTATTATTCTCTTAAAAGGAAATGACAAAAGGTATAATCAAACCAAGCTGAACCCAAAAGAAGGTCTGGTTCTTTGTATTATGCATGAAGAAGGCTTTTCATGTCTCTTCTGCCATTTGGATTTTGTTTGTGACAAGGGACTAGACACTACACATGATGCTGGAATGGAAACTGCAAGAGTATTTTTACCCTAATAAGATTAAAACTTGAAAATCAATTAGATTTTCAGGCACGTCTGTCGTATTGTCTTTCTGTGTGTTCCATGTTTCTTTTTCTAAAAAAATATTTTAATATCTTTTTTTTTAAGGGTGAGAAGGGATTGCACAAATATAGGTGATACATTTATACTTTTGCCCAAGTAAGATTAGAAACGAGAAGAGAAAAATATACATGTGTCAGTAATGTCCATTTTTTTCAGTTCTCTATTTCTTTTTTTCATCAACTTTAACAGGGCAACAATTAACCACAGCAAACCAACTAAGTACCTCTCCTCATCATCTAATAATATCTAAAAAGAATACAAATGAACGATTCTAAGAGCCAAACTATGTAGTGCTATAACATCAGCACATTTGTTCTATTCTTAGTTCACCAGAATGTGACTAACTGTTTTGCATTGTAATATGAATTTGAAAGTTTGAGATTCCTTATACGAAGACCTTTTCTCATATATCTAAGAACACGAGAACCACCAAAATGAGAAAAGAGTTAGTCCAAGCCAAAACGATTTTGACTCCATGAAAATCCAGACGGTGGGGCATCCTTATCTTAACAATCACAACCTGAAGTCCGACGTAGCCTTATCCACATTTCAATTTCAACAACACACACTCTCTCTCTATCCTTCCGACCACCAAAATATAAGAAAATTTTTCTTCCTCATCCTCCTCCAACCCAAAATTTAGCTTCAATTTCATTCCTCTGTAAAACCATGGCATCTCTGTGTTCATTTCCGCGCATTTCCTCCACAGAACCCATCAAACAATCGCCCGCCGTCGCCCCTTTTCCGCCCTCCAACCACCCAATAAAACCGTCCACCCTATCCCTCCGCCAAAGCAGCCGCAATCACAAGAGAATTTCCACAGTGGTCGCCGCCGTTGGAGACGTCTCCTCCGACGGCACCACATACTTGATCGCCGGCGCCATTGCTGTGGCTCTCGTCGGTACCGCCTTCCCCATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGTGCAGGGTTTGTCCGGCGATCGGAGTCGGCGCTGAGGGCAAATGCGGCTCGCAAAGATCAAACTCAGATCGTTTGTGCTCGTTGTAATGGGCTTGGCAAGCTCAACCAAGTGGACAAATAGATTAAAACCTGCCTTTTCTTTTTCCCTTCCGTAAATTACATTATTATTTATAAATGTGAATGTAATAAAATATGTTTCTACTCCATGGATTTTGAGACTTAATATTATAAATTCTCGGAGATGAAGAATGTTGTTGATCAGAGTGGTGCTTTGGTGAGATTCGTCTCTCTCTCTGTTTTTCCATATTGTCATCGAATTGCTCGTTGTGCTGTTCATTATATGTCGTTTGTTTTAGAAAGAAAAAAAAAGCTAAAGAAAACTGCACCGAATAACGAGTACCAACGATGCAAAAGACTCTCAATCCTGCGAAGTTTTATACATGCCAAAGCAATCATGAGAAAAAGAGACATCCCTCAACTTCCCACCTTCAACTTTAGCTTCCTTAGTCAAAGAAAAAACTAGATAAATCAACAAATTGATGACCTCCAAGTAATCAGACTCAACCAAGATATCAATGGTAGACATAATCTCAAGCATAAAACAAACCATATAGGTTGAATCTCCTTGTAAGAGAATGAGAACAGCCCCTTCCCAGAACGAGGTTTACAGGCTGGACATTCTGAAGGAAGGGAAGTGAGTAGCAAGATGAAACTTCAAGGATCTCACCTTCTAGTGTCTTGGGACAAACCTAAAGTTTGCCATTCAAATATGATCCCAAGTGGTCACAATAATAATAATACCAAAGACTAAAATGAGTATTTAGTAAGAAATTTGTGGTTAAGAGTGTAATTGTATATCAGATTGAAACAAATTTCAAA

Coding sequence (CDS)

ATGGCATCTCTGTGTTCATTTCCGCGCATTTCCTCCACAGAACCCATCAAACAATCGCCCGCCGTCGCCCCTTTTCCGCCCTCCAACCACCCAATAAAACCGTCCACCCTATCCCTCCGCCAAAGCAGCCGCAATCACAAGAGAATTTCCACAGTGGTCGCCGCCGTTGGAGACGTCTCCTCCGACGGCACCACATACTTGATCGCCGGCGCCATTGCTGTGGCTCTCGTCGGTACCGCCTTCCCCATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGTGCAGGGTTTGTCCGGCGATCGGAGTCGGCGCTGAGGGCAAATGCGGCTCGCAAAGATCAAACTCAGATCGTTTGTGCTCGTTGTAATGGGCTTGGCAAGCTCAACCAAGTGGACAAATAG

Protein sequence

MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIVCARCNGLGKLNQVDK*

Homology

[Close]

BLAST of CsGy3G030000 vs. NCBI nr
Match: XP_004137792.1 (uncharacterized protein LOC101209846 [Cucumis sativus] >KGN58857.1 hypothetical protein Csa_002363 [Cucumis sativus])

HSP 1 Score: 262 bits (670), Expect = 3.86e-88
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLCSFPRISSTEPIKQSPAVAPFPPSNH IKPSTLSLRQSSRNHKRISTVVAAVGDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHSIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. NCBI nr
Match: XP_008442527.1 (PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo])

HSP 1 Score: 257 bits (656), Expect = 5.27e-86
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLCSFPRISSTEPIKQSPA APFPPSNHPI+PSTLSLRQSSRNHKRISTVVAAVGDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           SDGTTYLIAGAIAVALVGTAFPI FSRKDLCPEC+GAGFVRRS SALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. NCBI nr
Match: XP_022935020.1 (uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 uncharacterized protein LOC111442008 [Cucurbita moschata] >KAG6580531.1 hypothetical protein SDJN03_20533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017282.1 hypothetical protein SDJN02_19145 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (619), Expect = 2.32e-80
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. NCBI nr
Match: XP_023528629.1 (uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (619), Expect = 1.67e-79
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 180 CARCNGLGKLNQVDK 194

[Close]

BLAST of CsGy3G030000 vs. NCBI nr
Match: XP_038905250.1 (uncharacterized protein LOC120091333 [Benincasa hispida])

HSP 1 Score: 239 bits (611), Expect = 3.84e-79
Identity = 121/135 (89.63%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLCSFPRISSTEPIKQ P  APFP SNHPI+PS LSLRQ S  HKRIS VVAAVGDVS
Sbjct: 1   MASLCSFPRISSTEPIKQPPTAAPFPSSNHPIRPSALSLRQISPKHKRISVVVAAVGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. ExPASy TrEMBL
Match: A0A0A0LDN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1)

HSP 1 Score: 262 bits (670), Expect = 1.87e-88
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLCSFPRISSTEPIKQSPAVAPFPPSNH IKPSTLSLRQSSRNHKRISTVVAAVGDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHSIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. ExPASy TrEMBL
Match: A0A1S3B5E7 (uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=4 SV=1)

HSP 1 Score: 257 bits (656), Expect = 2.55e-86
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLCSFPRISSTEPIKQSPA APFPPSNHPI+PSTLSLRQSSRNHKRISTVVAAVGDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           SDGTTYLIAGAIAVALVGTAFPI FSRKDLCPEC+GAGFVRRS SALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. ExPASy TrEMBL
Match: A0A6J1F9E5 (uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC111442008 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.12e-80
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. ExPASy TrEMBL
Match: A0A6J1J3Y5 (uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446 PE=4 SV=1)

HSP 1 Score: 239 bits (609), Expect = 3.75e-79
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H R STVVAAVGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of CsGy3G030000 vs. ExPASy TrEMBL
Match: A0A6J1I3R1 (uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 3.34e-75
Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60
           MASLCSFPRISS +PIK  PA APFPPSNHP +PS LSLRQSSRN KR ST+VAA+GDVS
Sbjct: 1   MASLCSFPRISSADPIKH-PAAAPFPPSNHPKRPSALSLRQSSRNQKRTSTIVAAIGDVS 60

Query: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCP CDGAGFVR+S +ALRANAARKDQ QIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIV 120

Query: 121 CARCNGLGKLNQVDK 135
           C+RCNGLGKLNQVDK
Sbjct: 121 CSRCNGLGKLNQVDK 134

[Close]

BLAST of CsGy3G030000 vs. TAIR 10
Match: AT5G02160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 84/126 (66.67%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 10  ISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIA 69
           +SST  +K S +    P  N+ I P   + R SS      S VVAAVGDVSSDGT YLI 
Sbjct: 12  VSSTNFLKHSSSWGS-PSPNNVILPK--NKRSSS------SVVVAAVGDVSSDGTIYLIG 71

Query: 70  GAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIVCARCNGLGK 129
           GAIAVALVGTAFPILF RKD CPECDGAGFVR+    LRANAARKD  QIVCA CNGLGK
Sbjct: 72  GAIAVALVGTAFPILFKRKDTCPECDGAGFVRKGGVTLRANAARKDLPQIVCANCNGLGK 128

Query: 130 LNQVDK 136
           LNQ+DK
Sbjct: 132 LNQIDK 128

The following BLAST results are available for this feature:

BLAST of CsGy3G030000 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G030000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137792.1	3.86e-88	99.26	uncharacterized protein LOC101209846 [Cucumis sativus] >KGN58857.1 hypothetical ...	[more]
XP_008442527.1	5.27e-86	96.30	PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo]	[more]
XP_022935020.1	2.32e-80	88.89	uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 unchar...	[more]
XP_023528629.1	1.67e-79	88.89	uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]	[more]
XP_038905250.1	3.84e-79	89.63	uncharacterized protein LOC120091333 [Benincasa hispida]	[more]

BLAST of CsGy3G030000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDN8	1.87e-88	99.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1	[more]
A0A1S3B5E7	2.55e-86	96.30	uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=...	[more]
A0A6J1F9E5	1.12e-80	88.89	uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC1114420...	[more]
A0A6J1J3Y5	3.75e-79	88.89	uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446...	[more]
A0A6J1I3R1	3.34e-75	85.19	uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276...	[more]

BLAST of CsGy3G030000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02160.1	1.5e-34	66.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..43
None	No IPR available	PANTHER	PTHR36389	OS05G0110100 PROTEIN	coord: 1..135
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 88..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G030000.1	CsGy3G030000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane