CsGy3G029990 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G029990
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type E3 ubiquitin transferase
Location	Gy14Chr3: 30200372 .. 30202282 (+)
RNA-Seq Expression	CsGy3G029990
Synteny	CsGy3G029990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACGACCCTTCGCTATCGAAATCCCACGCAATTGTTTTTAAACCTCAATTTTCATCTGCTGCGAATCCTCTCTCCTTGAACACCAAGGCGTTCATGAACAACTTCGCTATCTTTTCTTCCAATCCAGGGAGAGCGTTTTCGGATTCTTAAGTTTGTTGGCGTTCGTTGATTTTCCAACATCGAATTTTAATTGGTAATTTCAATCTCTTTATCAAAACTTTATATAAATAGGGTTTATTCTGTTAAGAGGTTGGTGTTATTCTTTGGATCATTCAATTGATGGATTTGATGGGATCAACATTTATTATTATTTTTTTTTTTTGTATGTGTTACAGATGCGATTGCTTTATCTGGGTTCGGGCTCAGGCCTTAGATTCGGTCTGTTGTAGAATTTAGGTCGTTGCCTTCTCTGTCTCCGCTTGTTCATCGATTTCCTGCTGCTGCTACGATGTACCACGATGATGCTTCTGGCCCAAACCCTTCTTTCGTGCCAAGATTGCGTCGCAGTGGAAGAAATGGCGAGGATCGCTCCTCTTTCAATCGTATCATTGTTCTGCGCGATCCTTCTAACTCGGGTGTTGTTAGTAATAATGGTATTGGAGGTGGAGGAAATTATGAGATTTTTTGTGACGATGGTACTGGGGCGAGCCTCCGGCCTTTACCTTCTAATGTATCCGAGTTCTTGATGGGATCGGGGTTCGATCGTCTTCTCAATCAATTGGCGCAACTGGAGGTGAATGGGGTTAGCCCATTGGAAAACCCACCGGCTTCGAAGGCTGCGATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAACCATGTGCGTGTGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTTGACTCTGAGGCTCGAGAGATGCCGTGTAAGCATATTTACCATTTGGATTGTATACTCCCTTGGCTTTCTATCCGGAATTCTTGTCCTGTTTGTCGGCACCAATTGCCTACCGATGTGCATAGCAGTGGGAGGAACTCCCCTGCTTCTGCTGAAGAAGTTGTTGGACTAACAATTTGGAGGCTTCCCGGTAGGGGTTTTGCTGTTGGAAGGTTTACTTGGGGCAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGTGGTATTCCTAGGAGGATTACGTGGGAGTCAAGCGGGAGAAGATCAAGTGAAAGTGGTGGATTTCGTAGCGTTTTTCGCAATTTATTCTCCTTTTTTGGGAGGTTTAGAAGCTCGTCCCGTCATTCTGGTTCTGGACCTGGTTCAGTAAGAAGGAGCTTCTCTGCTAGGTTATTCAACAGACACTCGAGGAGGAATAATCAACCTATAGCGTCGGACATAAACTATACGTTTTCTGCTTAGTTATACTCATAGAGAGGGTGAATTCTCACTCTTACTCCCTCTAGAAATTGTGAGTGATTGAGCCCATAACAGTCTTCCTTTTGGGTAATGGTGTAGACGTACAATTTTTGTTTATTAGCTGTATAGATACATCAACAAGAAATACAGAATTCGGTAACTTAAATGTAGTCGACTGGAGAATTTTTGACATGGTGGGACAAGGATATTTAGAGATGAATAAGGGAGAGAGTCGTATAATCTGCCTGGTCGAGGGTTAATGGCAGTTCAATTCGAGTATGTGAATGTATTCTGTTGTTTGATGTTGAAAGGAAAGAGATGGGTTAGGGAGTTCCTGTTGATGTCTAGTAGGTTCATTTTTTTCCTCTTATGCAATGTAACATTGTAACTTCGCTGCAAAGCAGCTGTTATCCTTAGAATATGAAGATCTTATGTTTTTAGTTATGTTTGTATTTTTGTCCCTTCTTGATTTTAACTTATAAGTTAAATTTCATCTCTCTGACTTTGCTTTGTG

mRNA sequence

CGACGACCCTTCGCTATCGAAATCCCACGCAATTGTTTTTAAACCTCAATTTTCATCTGCTGCGAATCCTCTCTCCTTGAACACCAAGGCGTTCATGAACAACTTCGCTATCTTTTCTTCCAATCCAGGGAGAGCGTTTTCGGATTCTTAAGTTTGTTGGCGTTCGTTGATTTTCCAACATCGAATTTTAATTGATGCGATTGCTTTATCTGGGTTCGGGCTCAGGCCTTAGATTCGGTCTGTTGTAGAATTTAGGTCGTTGCCTTCTCTGTCTCCGCTTGTTCATCGATTTCCTGCTGCTGCTACGATGTACCACGATGATGCTTCTGGCCCAAACCCTTCTTTCGTGCCAAGATTGCGTCGCAGTGGAAGAAATGGCGAGGATCGCTCCTCTTTCAATCGTATCATTGTTCTGCGCGATCCTTCTAACTCGGGTGTTGTTAGTAATAATGGTATTGGAGGTGGAGGAAATTATGAGATTTTTTGTGACGATGGTACTGGGGCGAGCCTCCGGCCTTTACCTTCTAATGTATCCGAGTTCTTGATGGGATCGGGGTTCGATCGTCTTCTCAATCAATTGGCGCAACTGGAGGTGAATGGGGTTAGCCCATTGGAAAACCCACCGGCTTCGAAGGCTGCGATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAACCATGTGCGTGTGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTTGACTCTGAGGCTCGAGAGATGCCGTGTAAGCATATTTACCATTTGGATTGTATACTCCCTTGGCTTTCTATCCGGAATTCTTGTCCTGTTTGTCGGCACCAATTGCCTACCGATGTGCATAGCAGTGGGAGGAACTCCCCTGCTTCTGCTGAAGAAGTTGTTGGACTAACAATTTGGAGGCTTCCCGGTAGGGGTTTTGCTGTTGGAAGGTTTACTTGGGGCAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGTGGTATTCCTAGGAGGATTACGTGGGAGTCAAGCGGGAGAAGATCAAGTGAAAGTGGTGGATTTCGTAGCGTTTTTCGCAATTTATTCTCCTTTTTTGGGAGGTTTAGAAGCTCGTCCCGTCATTCTGGTTCTGGACCTGGTTCAGTAAGAAGGAGCTTCTCTGCTAGGTTATTCAACAGACACTCGAGGAGGAATAATCAACCTATAGCGTCGGACATAAACTATACGTTTTCTGCTTAGTTATACTCATAGAGAGGGTGAATTCTCACTCTTACTCCCTCTAGAAATTGTGAGTGATTGAGCCCATAACAGTCTTCCTTTTGGGTAATGGTGTAGACGTACAATTTTTGTTTATTAGCTGTATAGATACATCAACAAGAAATACAGAATTCGGTAACTTAAATGTAGTCGACTGGAGAATTTTTGACATGGTGGGACAAGGATATTTAGAGATGAATAAGGGAGAGAGTCGTATAATCTGCCTGGTCGAGGGTTAATGGCAGTTCAATTCGAGTATGTGAATGTATTCTGTTGTTTGATGTTGAAAGGAAAGAGATGGGTTAGGGAGTTCCTGTTGATGTCTAGTAGGTTCATTTTTTTCCTCTTATGCAATGTAACATTGTAACTTCGCTGCAAAGCAGCTGTTATCCTTAGAATATGAAGATCTTATGTTTTTAGTTATGTTTGTATTTTTGTCCCTTCTTGATTTTAACTTATAAGTTAAATTTCATCTCTCTGACTTTGCTTTGTG

Coding sequence (CDS)

ATGTACCACGATGATGCTTCTGGCCCAAACCCTTCTTTCGTGCCAAGATTGCGTCGCAGTGGAAGAAATGGCGAGGATCGCTCCTCTTTCAATCGTATCATTGTTCTGCGCGATCCTTCTAACTCGGGTGTTGTTAGTAATAATGGTATTGGAGGTGGAGGAAATTATGAGATTTTTTGTGACGATGGTACTGGGGCGAGCCTCCGGCCTTTACCTTCTAATGTATCCGAGTTCTTGATGGGATCGGGGTTCGATCGTCTTCTCAATCAATTGGCGCAACTGGAGGTGAATGGGGTTAGCCCATTGGAAAACCCACCGGCTTCGAAGGCTGCGATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAACCATGTGCGTGTGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTTGACTCTGAGGCTCGAGAGATGCCGTGTAAGCATATTTACCATTTGGATTGTATACTCCCTTGGCTTTCTATCCGGAATTCTTGTCCTGTTTGTCGGCACCAATTGCCTACCGATGTGCATAGCAGTGGGAGGAACTCCCCTGCTTCTGCTGAAGAAGTTGTTGGACTAACAATTTGGAGGCTTCCCGGTAGGGGTTTTGCTGTTGGAAGGTTTACTTGGGGCAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGTGGTATTCCTAGGAGGATTACGTGGGAGTCAAGCGGGAGAAGATCAAGTGAAAGTGGTGGATTTCGTAGCGTTTTTCGCAATTTATTCTCCTTTTTTGGGAGGTTTAGAAGCTCGTCCCGTCATTCTGGTTCTGGACCTGGTTCAGTAAGAAGGAGCTTCTCTGCTAGGTTATTCAACAGACACTCGAGGAGGAATAATCAACCTATAGCGTCGGACATAAACTATACGTTTTCTGCTTAG

Protein sequence

MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFCDDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKILANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSRRNNQPIASDINYTFSA*

Homology

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BLAST of CsGy3G029990 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.2e-64
Identity = 146/300 (48.67%), Postives = 174/300 (58.00%), Query Frame = 0


Query: 16  RLRRSGRNGEDRSSFNRIIVLRDPSNSGVVS--NNGIGGGGN-----YEIFCDDGTGASL 75
           R RRS R    R+SFN +IVL      G      N  G G       YE + DDG+G+ L
Sbjct: 95  RRRRSNR----RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGL 154

Query: 76  RPLPSNVSEFLMGSGFDRLLNQLAQLEV--NGVSPLENPPASKAAIESLPVVKILANHVR 135
           RPLP +VSE LMGSGF+RLL QL+Q+E   NG+    NPPASK+AIESLP V+I   H +
Sbjct: 155 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 214

Query: 136 VESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNS 195
            E++CAVC E FE   E REMPCKHI+H DCI+PWLSIRNSCPVCR +LP+D        
Sbjct: 215 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSNEE 274

Query: 196 PASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITW- 255
               E  VG+TIWRLPG GFAVGRF  G    E  LPVV TE+DGG   ++  PRRI+W 
Sbjct: 275 ----EHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWV 334

Query: 256 --------ESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNR 298
                     +G RS   G  R   R + SF  R R S   S S    +      R+ NR
Sbjct: 335 RAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNR 386

[Close]

BLAST of CsGy3G029990 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.2e-61
Identity = 136/288 (47.22%), Postives = 173/288 (60.07%), Query Frame = 0


Query: 10  NPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGN--YEIFCDDGTGAS 69
           N   V R RRSGR    R SFN +IVL+  +        G        +E + DDG+G+ 
Sbjct: 78  NRRSVIRRRRSGR----RPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSG 137

Query: 70  LRPLPSNVSEFLMGSGFDRLLNQLAQLEVN--GVSPLENPPASKAAIESLPVVKILANHV 129
           LRPLP +VSE LMGSGF+RLL QL+Q+E +  G+    NPPASK+AIESLP V+I   H+
Sbjct: 138 LRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHI 197

Query: 130 RVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRN 189
             E++CAVC E FE ++EAREMPCKH++H DCI+PWLSIRNSCPVCR +LP++ +    N
Sbjct: 198 GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNN 257

Query: 190 SPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEID-GGFSTTSGIPRRIT 249
           +    +  VG+TIWRLPG GFAVGRF       E  LPVV TE+D GG   +   PRRI+
Sbjct: 258 N--EEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 317

Query: 250 W-----------ESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGS 282
           W             +G  S   G  R + R + S   R R +   S S
Sbjct: 318 WVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSS 359

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BLAST of CsGy3G029990 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-60
Identity = 151/334 (45.21%), Postives = 195/334 (58.38%), Query Frame = 0


Query: 3   HDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPS---NSGVVSNNGIGGGGNYEIF 62
           H D S P P+ V R R          S N +IVLR  +   +S VVS  G+     ++++
Sbjct: 75  HADNS-PTPTIVTRTR-------SNRSPNPVIVLRGSAAAPSSDVVS-EGLDRSA-FQMY 134

Query: 63  CDDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVN---GVSPLENPPASKAAIESLP 122
            DDGT + LRPLP +++EFL+GSGFDRLL+Q++Q+E+N    +   E+PPASK+AIE+LP
Sbjct: 135 YDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALP 194

Query: 123 VVKILANHV--RVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQ 182
           +++I   H+    +SHCAVCKE F L S AREMPC HIYH DCILPWL+IRNSCPVCRH+
Sbjct: 195 LIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHE 254

Query: 183 LPTDVHSSGRNS-----PASAEE----VVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVV 242
           LP +  + G  +      A+AEE      GLTIWRLPG GFAVGR   G    +  +PVV
Sbjct: 255 LPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVV 314

Query: 243 YTEIDGGFSTTSGIPRRITWES------SGRRSSESGGFRSVFRNLFSFFGRFRSS---S 302
           YTE+DGG      +PRR+ W S       G      GGF      LF  F     S   +
Sbjct: 315 YTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAA 374

Query: 303 RHSGSGPGS----VRRSFSARLF---NRHSRRNN 304
             + SG GS     RR+ S  +F   +  SRR N
Sbjct: 375 AAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRN 398

[Close]

BLAST of CsGy3G029990 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.3e-29
Identity = 56/109 (51.38%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 71  LPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKILANHVRVE-S 130
           LP+N+ ++ +G G ++L+ QLA+ + N       PPASK+AIE+LP+V I  +++  E +
Sbjct: 166 LPANIGDYFIGPGLEQLIQQLAENDPNRYG---TPPASKSAIEALPLVNITKSNLNSEFN 225

Query: 131 HCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTD 179
            CAVC + FE  +EA++MPCKH+YH DC+LPWL + NSCPVCRH+LPTD
Sbjct: 226 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTD 271

[Close]

BLAST of CsGy3G029990 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-26
Identity = 53/127 (41.73%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 53  GGNYEIFCDDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAI 112
           G ++E   ++        +P N  ++  G G ++L+ QLA+ + N       PPASK+AI
Sbjct: 140 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAI 199

Query: 113 ESLPVVKILANHVRVE-SHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVC 172
           ++LP VK+  + ++ E + CAVC + FE  S+ ++MPCKH++H DC+LPWL + NSCPVC
Sbjct: 200 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 259

Query: 173 RHQLPTD 179
           R +LPTD
Sbjct: 260 RFELPTD 263

[Close]

BLAST of CsGy3G029990 vs. NCBI nr
Match: XP_004137779.1 (E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN58856.1 hypothetical protein Csa_000939 [Cucumis sativus])

HSP 1 Score: 645 bits (1664), Expect = 1.14e-233
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR
Sbjct: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASDINYTFSA
Sbjct: 301 RNNQPIASDINYTFSA 316

[Close]

BLAST of CsGy3G029990 vs. NCBI nr
Match: XP_008442524.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008442525.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 615 bits (1587), Expect = 6.24e-222
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRS FNR IVLRDPSNSGVVSNNGIG GGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLA+LEVN VSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITWESSGRRS ESGGFR +FRNLFSF GRFRSSSRHSGSGPGS+RRSFSARLFNR SR
Sbjct: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASDINY FSA
Sbjct: 301 RNNQPIASDINYMFSA 316

[Close]

BLAST of CsGy3G029990 vs. NCBI nr
Match: KAA0044102.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK25035.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 615 bits (1587), Expect = 1.84e-221
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRS FNR IVLRDPSNSGVVSNNGIG GGNYEIFC
Sbjct: 30  MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 89

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLA+LEVN VSPLENPPASKAAIESLPVVKI
Sbjct: 90  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 149

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 150 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 209

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 210 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 269

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITWESSGRRS ESGGFR +FRNLFSF GRFRSSSRHSGSGPGS+RRSFSARLFNR SR
Sbjct: 270 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 329

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASDINY FSA
Sbjct: 330 RNNQPIASDINYMFSA 345

[Close]

BLAST of CsGy3G029990 vs. NCBI nr
Match: XP_038906308.1 (E3 ubiquitin-protein ligase RDUF1-like [Benincasa hispida])

HSP 1 Score: 583 bits (1502), Expect = 5.64e-209
Identity = 284/316 (89.87%), Postives = 295/316 (93.35%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDAS P+PSFVPRLRRSGRNGEDRS FNRIIVLRDPSNSG + NNGIG GGNYEI+ 
Sbjct: 1   MYHDDASDPDPSFVPRLRRSGRNGEDRSPFNRIIVLRDPSNSGAIGNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLAQLEVNGV PLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGPLENPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLP+DVH
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPSDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSG+P
Sbjct: 181 ISGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITW SSGRRSSESGGFR +FRN FSFF RFRSSSRHSGSG G +RRSFSA LFNR SR
Sbjct: 241 RRITWASSGRRSSESGGFRRIFRNFFSFFRRFRSSSRHSGSGHGLMRRSFSATLFNRRSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASD NYT SA
Sbjct: 301 RNNQPIASDTNYTLSA 316

[Close]

BLAST of CsGy3G029990 vs. NCBI nr
Match: XP_022983994.1 (E3 ubiquitin-protein ligase RDUF1-like [Cucurbita maxima])

HSP 1 Score: 553 bits (1426), Expect = 2.15e-197
Identity = 271/316 (85.76%), Postives = 286/316 (90.51%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           M HDDAS  +PSFVPRLRRS RNGEDRSSFNRIIVLRDPSNSG +SNNG+GGGGNYEI+ 
Sbjct: 1   MNHDDASDLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLR LPSN+SEFLMGSG DRLLNQLAQLEVNGV PLE+PPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAR+MPCKHIYH DCI PWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPLESHCAVCKEPFELDSEARQMPCKHIYHSDCICPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTT G+P
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTIGVP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           R ITW SSG RSSESGGFRS+FRN FSFFGRFRS+SR SGS  G +RRSFS  LFNR SR
Sbjct: 241 RSITWASSGIRSSESGGFRSIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNN  + SD NYTFSA
Sbjct: 301 RNNHSMVSDANYTFSA 316

[Close]

BLAST of CsGy3G029990 vs. ExPASy TrEMBL
Match: A0A0A0LFJ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 PE=4 SV=1)

HSP 1 Score: 645 bits (1664), Expect = 5.52e-234
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR
Sbjct: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASDINYTFSA
Sbjct: 301 RNNQPIASDINYTFSA 316

[Close]

BLAST of CsGy3G029990 vs. ExPASy TrEMBL
Match: A0A1S3B6J2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 PE=4 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 3.02e-222
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRS FNR IVLRDPSNSGVVSNNGIG GGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLA+LEVN VSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITWESSGRRS ESGGFR +FRNLFSF GRFRSSSRHSGSGPGS+RRSFSARLFNR SR
Sbjct: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASDINY FSA
Sbjct: 301 RNNQPIASDINYMFSA 316

[Close]

BLAST of CsGy3G029990 vs. ExPASy TrEMBL
Match: A0A5A7TL92 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001550 PE=4 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 8.89e-222
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRS FNR IVLRDPSNSGVVSNNGIG GGNYEIFC
Sbjct: 30  MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 89

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLA+LEVN VSPLENPPASKAAIESLPVVKI
Sbjct: 90  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 149

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 150 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 209

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 210 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 269

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRITWESSGRRS ESGGFR +FRNLFSF GRFRSSSRHSGSGPGS+RRSFSARLFNR SR
Sbjct: 270 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 329

Query: 301 RNNQPIASDINYTFSA 316
           RNNQPIASDINY FSA
Sbjct: 330 RNNQPIASDINYMFSA 345

[Close]

BLAST of CsGy3G029990 vs. ExPASy TrEMBL
Match: A0A6J1J964 (E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC111482444 PE=4 SV=1)

HSP 1 Score: 553 bits (1426), Expect = 1.04e-197
Identity = 271/316 (85.76%), Postives = 286/316 (90.51%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           M HDDAS  +PSFVPRLRRS RNGEDRSSFNRIIVLRDPSNSG +SNNG+GGGGNYEI+ 
Sbjct: 1   MNHDDASDLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLR LPSN+SEFLMGSG DRLLNQLAQLEVNGV PLE+PPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAR+MPCKHIYH DCI PWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPLESHCAVCKEPFELDSEARQMPCKHIYHSDCICPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTT G+P
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTIGVP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           R ITW SSG RSSESGGFRS+FRN FSFFGRFRS+SR SGS  G +RRSFS  LFNR SR
Sbjct: 241 RSITWASSGIRSSESGGFRSIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSR 300

Query: 301 RNNQPIASDINYTFSA 316
           RNN  + SD NYTFSA
Sbjct: 301 RNNHSMVSDANYTFSA 316

[Close]

BLAST of CsGy3G029990 vs. ExPASy TrEMBL
Match: A0A6J1CXJ7 (probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC111015120 PE=4 SV=1)

HSP 1 Score: 548 bits (1412), Expect = 1.05e-195
Identity = 268/308 (87.01%), Postives = 282/308 (91.56%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60
           MYHDDAS P+PSFVPRLRRS RNGEDR+ FNRIIVLRDPSN+G +SNNGIG GGNYEI+ 
Sbjct: 1   MYHDDASDPDPSFVPRLRRSRRNGEDRAPFNRIIVLRDPSNAGAISNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120
           DDGTG++LRPLPSN+SEFLMGSGFDRLLNQLAQLEVNGV  LE+PPASKAAIESLPVVKI
Sbjct: 61  DDGTGSTLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGSLEHPPASKAAIESLPVVKI 120

Query: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV VESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLPTD H
Sbjct: 121 LASHVPVESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTDGH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300
           RRI+W SSGRRSSE GGFR VFRN FSFFGRFRSSS HS SG G +RRSFS+ LFNR SR
Sbjct: 241 RRISWASSGRRSSEGGGFRRVFRNFFSFFGRFRSSSHHSSSGTGLMRRSFSSTLFNRRSR 300

Query: 301 RNNQPIAS 308
           RNN   AS
Sbjct: 301 RNNHLTAS 308

[Close]

BLAST of CsGy3G029990 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-65
Identity = 146/300 (48.67%), Postives = 174/300 (58.00%), Query Frame = 0


Query: 16  RLRRSGRNGEDRSSFNRIIVLRDPSNSGVVS--NNGIGGGGN-----YEIFCDDGTGASL 75
           R RRS R    R+SFN +IVL      G      N  G G       YE + DDG+G+ L
Sbjct: 95  RRRRSNR----RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGL 154

Query: 76  RPLPSNVSEFLMGSGFDRLLNQLAQLEV--NGVSPLENPPASKAAIESLPVVKILANHVR 135
           RPLP +VSE LMGSGF+RLL QL+Q+E   NG+    NPPASK+AIESLP V+I   H +
Sbjct: 155 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 214

Query: 136 VESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNS 195
            E++CAVC E FE   E REMPCKHI+H DCI+PWLSIRNSCPVCR +LP+D        
Sbjct: 215 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSNEE 274

Query: 196 PASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITW- 255
               E  VG+TIWRLPG GFAVGRF  G    E  LPVV TE+DGG   ++  PRRI+W 
Sbjct: 275 ----EHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWV 334

Query: 256 --------ESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNR 298
                     +G RS   G  R   R + SF  R R S   S S    +      R+ NR
Sbjct: 335 RAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNR 386

[Close]

BLAST of CsGy3G029990 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-62
Identity = 136/288 (47.22%), Postives = 173/288 (60.07%), Query Frame = 0


Query: 10  NPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGN--YEIFCDDGTGAS 69
           N   V R RRSGR    R SFN +IVL+  +        G        +E + DDG+G+ 
Sbjct: 78  NRRSVIRRRRSGR----RPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSG 137

Query: 70  LRPLPSNVSEFLMGSGFDRLLNQLAQLEVN--GVSPLENPPASKAAIESLPVVKILANHV 129
           LRPLP +VSE LMGSGF+RLL QL+Q+E +  G+    NPPASK+AIESLP V+I   H+
Sbjct: 138 LRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHI 197

Query: 130 RVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRN 189
             E++CAVC E FE ++EAREMPCKH++H DCI+PWLSIRNSCPVCR +LP++ +    N
Sbjct: 198 GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNN 257

Query: 190 SPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEID-GGFSTTSGIPRRIT 249
           +    +  VG+TIWRLPG GFAVGRF       E  LPVV TE+D GG   +   PRRI+
Sbjct: 258 N--EEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 317

Query: 250 W-----------ESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGS 282
           W             +G  S   G  R + R + S   R R +   S S
Sbjct: 318 WVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSS 359

[Close]

BLAST of CsGy3G029990 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 235.0 bits (598), Expect = 8.6e-62
Identity = 151/334 (45.21%), Postives = 195/334 (58.38%), Query Frame = 0


Query: 3   HDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPS---NSGVVSNNGIGGGGNYEIF 62
           H D S P P+ V R R          S N +IVLR  +   +S VVS  G+     ++++
Sbjct: 75  HADNS-PTPTIVTRTR-------SNRSPNPVIVLRGSAAAPSSDVVS-EGLDRSA-FQMY 134

Query: 63  CDDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVN---GVSPLENPPASKAAIESLP 122
            DDGT + LRPLP +++EFL+GSGFDRLL+Q++Q+E+N    +   E+PPASK+AIE+LP
Sbjct: 135 YDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALP 194

Query: 123 VVKILANHV--RVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQ 182
           +++I   H+    +SHCAVCKE F L S AREMPC HIYH DCILPWL+IRNSCPVCRH+
Sbjct: 195 LIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHE 254

Query: 183 LPTDVHSSGRNS-----PASAEE----VVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVV 242
           LP +  + G  +      A+AEE      GLTIWRLPG GFAVGR   G    +  +PVV
Sbjct: 255 LPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVV 314

Query: 243 YTEIDGGFSTTSGIPRRITWES------SGRRSSESGGFRSVFRNLFSFFGRFRSS---S 302
           YTE+DGG      +PRR+ W S       G      GGF      LF  F     S   +
Sbjct: 315 YTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAA 374

Query: 303 RHSGSGPGS----VRRSFSARLF---NRHSRRNN 304
             + SG GS     RR+ S  +F   +  SRR N
Sbjct: 375 AAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRN 398

[Close]

BLAST of CsGy3G029990 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 4.0e-27
Identity = 53/127 (41.73%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 53  GGNYEIFCDDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAI 112
           G ++E   ++        +P N  ++  G G ++L+ QLA+ + N       PPASK+AI
Sbjct: 140 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAI 199

Query: 113 ESLPVVKILANHVRVE-SHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVC 172
           ++LP VK+  + ++ E + CAVC + FE  S+ ++MPCKH++H DC+LPWL + NSCPVC
Sbjct: 200 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 259

Query: 173 RHQLPTD 179
           R +LPTD
Sbjct: 260 RFELPTD 263

[Close]

BLAST of CsGy3G029990 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-26
Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 73  SNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKILANHVR-VESHC 132
           +N  ++  G G + L+ QL+    +G      PPA K++I++LP +KI   H++  +SHC
Sbjct: 131 TNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHC 190

Query: 133 AVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNS 187
            VCK+ FEL SEA++MPC HIYH DCI+PWL   NSCPVCR +LP+   SS   S
Sbjct: 191 PVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQS 241

The following BLAST results are available for this feature:

BLAST of CsGy3G029990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB6	5.2e-64	48.67	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	3.2e-61	47.22	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
O22283	1.2e-60	45.21	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
P0CH30	9.3e-29	51.38	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	5.7e-26	41.73	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of CsGy3G029990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137779.1	1.14e-233	100.00	E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN58856.1 hypothetical pro...	[more]
XP_008442524.1	6.24e-222	94.94	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008442525.1...	[more]
KAA0044102.1	1.84e-221	94.94	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK25035.1 E3...	[more]
XP_038906308.1	5.64e-209	89.87	E3 ubiquitin-protein ligase RDUF1-like [Benincasa hispida]	[more]
XP_022983994.1	2.15e-197	85.76	E3 ubiquitin-protein ligase RDUF1-like [Cucurbita maxima]	[more]

BLAST of CsGy3G029990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFJ3	5.52e-234	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 P...	[more]
A0A1S3B6J2	3.02e-222	94.94	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 P...	[more]
A0A5A7TL92	8.89e-222	94.94	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1J964	1.04e-197	85.76	E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC1114824...	[more]
A0A6J1CXJ7	1.05e-195	87.01	probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CsGy3G029990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46620.1	3.7e-65	48.67	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	2.3e-62	47.22	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	8.6e-62	45.21	RING-H2 finger C2A	[more]
AT3G19950.1	4.0e-27	41.73	RING/U-box superfamily protein	[more]
AT3G56580.2	3.4e-26	46.96	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 131..171 e-value: 3.2E-7 score: 40.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 130..172 e-value: 1.5E-10 score: 41.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 131..172 score: 12.149959
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 96..179 e-value: 2.3E-20 score: 74.0
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 194..281 e-value: 9.2E-34 score: 116.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR15710:SF61	E3 UBIQUITIN-PROTEIN LIGASE RHC2A-RELATED	coord: 14..260
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 14..260
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 131..172 e-value: 1.38803E-22 score: 86.6028
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G029990.2	CsGy3G029990.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity