CsGy3G029537 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G029537
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionInosine-5'-monophosphate dehydrogenase
LocationGy14Chr3: 29989419 .. 29989970 (-)
RNA-Seq ExpressionCsGy3G029537
SyntenyCsGy3G029537
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCTTTAGAGGCAATGGCCAGAGGAAGTGACGACAGGTACTTGGGGGATATTGCAACCCTTAAGATAGTCGAGGGGGTTGCTGGAGCAATTGCTGATAAGGGTTCAGTCTTGAAATTCATACTCTATACCACGCAAGCAGTCAAGCAAGGGTTCCAAGAGATTGCTGCTTCTCCACTTTATGCTTTGTTGATTGTGAACATGAATTTGTTTAGAATCGTTGTCAATTTATTGGGTTTACCTATGTGCAAGTTCGTAAGGTGGCAGCACAGGTCGAAGGTGGAATTCATGGATTGGTCTCTTATGAAAAGAGATCGTTTTGAAAAACAAATACATTATGACTATAAGCTGCTCCTTAAAACTGGACTTGTATCAATAATTTATATACAGTGATGTGCATATTGTAGTCTCCAGGTTTCATCAATTCGAGCTAGCAGTGGATTTTTTTTTGCTCCTCTTCTACATATATTTGTTGATCTTTTATCAACACGGTCTATGCCTTCAAAACAGAGTGTTGGGAAGAAAGTTGTAACGAATGTGATTGGTTGA

mRNA sequence

ATGGGGTCTTTAGAGGCAATGGCCAGAGGAAGTGACGACAGGTACTTGGGGGATATTGCAACCCTTAAGATAGTCGAGGGGGTTGCTGGAGCAATTGCTGATAAGGGTTCAGTCTTGAAATTCATACTCTATACCACGCAAGCAGTCAAGCAAGGGTTCCAAGAGATTGCTGCTTCTCCACTTTATGCTTTGTTGATTGTGAACATGAATTTGTTTAGAATCGTTGTCAATTTATTGGGTTTACCTATGTGCAAGTTCGTAAGGTGGCAGCACAGGTCGAAGGTGGAATTCATGGATTGTCTCCAGGTTTCATCAATTCGAGCTAGCAGTGGATTTTTTTTTGCTCCTCTTCTACATATATTTGTTGATCTTTTATCAACACGGTCTATGCCTTCAAAACAGAGTGTTGGGAAGAAAGTTGTAACGAATGTGATTGGTTGA

Coding sequence (CDS)

ATGGGGTCTTTAGAGGCAATGGCCAGAGGAAGTGACGACAGGTACTTGGGGGATATTGCAACCCTTAAGATAGTCGAGGGGGTTGCTGGAGCAATTGCTGATAAGGGTTCAGTCTTGAAATTCATACTCTATACCACGCAAGCAGTCAAGCAAGGGTTCCAAGAGATTGCTGCTTCTCCACTTTATGCTTTGTTGATTGTGAACATGAATTTGTTTAGAATCGTTGTCAATTTATTGGGTTTACCTATGTGCAAGTTCGTAAGGTGGCAGCACAGGTCGAAGGTGGAATTCATGGATTGTCTCCAGGTTTCATCAATTCGAGCTAGCAGTGGATTTTTTTTTGCTCCTCTTCTACATATATTTGTTGATCTTTTATCAACACGGTCTATGCCTTCAAAACAGAGTGTTGGGAAGAAAGTTGTAACGAATGTGATTGGTTGA

Protein sequence

MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASPLYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHIFVDLLSTRSMPSKQSVGKKVVTNVIG*
Homology
BLAST of CsGy3G029537 vs. ExPASy Swiss-Prot
Match: Q9SA34 (Inosine-5'-monophosphate dehydrogenase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g16350 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.6e-18
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT  AVKQGFQ++ AS 
Sbjct: 404 MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMHAVKQGFQDLGASS 463

Query: 61  L 62
           L
Sbjct: 464 L 464

BLAST of CsGy3G029537 vs. ExPASy Swiss-Prot
Match: Q84XA3 (Inosine-5'-monophosphate dehydrogenase OS=Vigna unguiculata OX=3917 GN=impdh PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.5e-17
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAM +GSD RYLGD A LKI +GV GA+ DKGSVL FI YT QAV+QGFQ+I AS 
Sbjct: 404 MGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVKDKGSVLNFIPYTLQAVRQGFQDIGASS 463

Query: 61  L 62
           L
Sbjct: 464 L 464

BLAST of CsGy3G029537 vs. ExPASy Swiss-Prot
Match: P47996 (Inosine-5'-monophosphate dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=IMPDH PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.2e-16
Identity = 46/75 (61.33%), Postives = 55/75 (73.33%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAM +GSD RYLGD   LKI +GV GA+ADKGSVLK I YT  AVKQGFQ++ AS 
Sbjct: 405 MGSLEAMTKGSDQRYLGDQTKLKIAQGVVGAVADKGSVLKLIPYTMHAVKQGFQDLGASS 464

Query: 61  LY-ALLIVNMNLFRI 75
           L  A  ++  N+ R+
Sbjct: 465 LQSAHGLLRSNILRL 479

BLAST of CsGy3G029537 vs. ExPASy Swiss-Prot
Match: Q54QQ0 (Inosine-5'-monophosphate dehydrogenase OS=Dictyostelium discoideum OX=44689 GN=impdh PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAAS 60
           MGSLEAM +G D RY  +   +K+ +GV+G++ DKGSV KF+ Y  Q +K G Q++  +
Sbjct: 417 MGSLEAMVKGGDQRYFSETDKIKVAQGVSGSVVDKGSVKKFVPYLIQGIKHGLQDLGCN 475

BLAST of CsGy3G029537 vs. ExPASy Swiss-Prot
Match: P50098 (Inosine-5'-monophosphate dehydrogenase OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-07
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 1   MGSLEAMARG--SDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEI 57
           MGS++AM +G  S  RYL +  TL++ +GVAGA+ DKGSVLK + Y  + ++Q  Q+I
Sbjct: 408 MGSIDAMLQGRESGKRYLSENETLQVAQGVAGAVLDKGSVLKLLAYIHKGLQQSAQDI 465

BLAST of CsGy3G029537 vs. NCBI nr
Match: KGN58808.1 (hypothetical protein Csa_001721 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 7.27e-96
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP
Sbjct: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60

Query: 61  LYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHI 120
           LYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHI
Sbjct: 61  LYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHI 120

Query: 121 FVDLLSTRSMPSKQSVGKKVVTNVIG 146
           FVDLLSTRSMPSKQSVGKKVVTNVIG
Sbjct: 121 FVDLLSTRSMPSKQSVGKKVVTNVIG 146

BLAST of CsGy3G029537 vs. NCBI nr
Match: TQE02657.1 (hypothetical protein C1H46_011726 [Malus baccata])

HSP 1 Score: 93.6 bits (231), Expect = 1.20e-21
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 1  MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTIQAVKQGFQDLGASS 60

BLAST of CsGy3G029537 vs. NCBI nr
Match: RXH86657.1 (hypothetical protein DVH24_021930 [Malus domestica])

HSP 1 Score: 92.8 bits (229), Expect = 1.54e-21
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM  GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 1  MGSLEAMTNGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASS 60

BLAST of CsGy3G029537 vs. NCBI nr
Match: AAC19381.1 (inosine-5'-monophosphate dehydrogenase, partial [Prunus persica])

HSP 1 Score: 93.6 bits (231), Expect = 1.92e-21
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 18 MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTIQAVKQGFQDLGASS 77

BLAST of CsGy3G029537 vs. NCBI nr
Match: XP_021804122.1 (inosine-5'-monophosphate dehydrogenase 2-like, partial [Prunus avium])

HSP 1 Score: 93.6 bits (231), Expect = 2.39e-21
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 26 MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASS 85

BLAST of CsGy3G029537 vs. ExPASy TrEMBL
Match: A0A0A0LAC3 (IMPDH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G732640 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 3.52e-96
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP
Sbjct: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60

Query: 61  LYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHI 120
           LYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHI
Sbjct: 61  LYALLIVNMNLFRIVVNLLGLPMCKFVRWQHRSKVEFMDCLQVSSIRASSGFFFAPLLHI 120

Query: 121 FVDLLSTRSMPSKQSVGKKVVTNVIG 146
           FVDLLSTRSMPSKQSVGKKVVTNVIG
Sbjct: 121 FVDLLSTRSMPSKQSVGKKVVTNVIG 146

BLAST of CsGy3G029537 vs. ExPASy TrEMBL
Match: A0A540MV31 (IMPDH domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_011726 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.80e-22
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 1  MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTIQAVKQGFQDLGASS 60

BLAST of CsGy3G029537 vs. ExPASy TrEMBL
Match: A0A498IWK8 (IMPDH domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_021930 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.45e-22
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM  GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 1  MGSLEAMTNGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASS 60

BLAST of CsGy3G029537 vs. ExPASy TrEMBL
Match: O81282 (Inosine-5'-monophosphate dehydrogenase (Fragment) OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 9.30e-22
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 18 MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTIQAVKQGFQDLGASS 77

BLAST of CsGy3G029537 vs. ExPASy TrEMBL
Match: A0A6P5RND7 (inosine-5'-monophosphate dehydrogenase 2-like OS=Prunus avium OX=42229 GN=LOC110748449 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.16e-21
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 1  MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
          MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT QAVKQGFQ++ AS 
Sbjct: 26 MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASS 85

BLAST of CsGy3G029537 vs. TAIR 10
Match: AT1G16350.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-19
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAM +GSD RYLGD A LKI +GV GA+ADKGSVLKFI YT  AVKQGFQ++ AS 
Sbjct: 404 MGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMHAVKQGFQDLGASS 463

Query: 61  L 62
           L
Sbjct: 464 L 464

BLAST of CsGy3G029537 vs. TAIR 10
Match: AT1G79470.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 46/75 (61.33%), Postives = 55/75 (73.33%), Query Frame = 0

Query: 1   MGSLEAMARGSDDRYLGDIATLKIVEGVAGAIADKGSVLKFILYTTQAVKQGFQEIAASP 60
           MGSLEAM +GSD RYLGD   LKI +GV GA+ADKGSVLK I YT  AVKQGFQ++ AS 
Sbjct: 405 MGSLEAMTKGSDQRYLGDQTKLKIAQGVVGAVADKGSVLKLIPYTMHAVKQGFQDLGASS 464

Query: 61  LY-ALLIVNMNLFRI 75
           L  A  ++  N+ R+
Sbjct: 465 LQSAHGLLRSNILRL 479

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SA347.6e-1873.77Inosine-5'-monophosphate dehydrogenase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g... [more]
Q84XA36.5e-1772.13Inosine-5'-monophosphate dehydrogenase OS=Vigna unguiculata OX=3917 GN=impdh PE=... [more]
P479963.2e-1661.33Inosine-5'-monophosphate dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=IMPD... [more]
Q54QQ04.5e-1045.76Inosine-5'-monophosphate dehydrogenase OS=Dictyostelium discoideum OX=44689 GN=i... [more]
P500983.6e-0748.28Inosine-5'-monophosphate dehydrogenase OS=Trypanosoma brucei brucei OX=5702 PE=1... [more]
Match NameE-valueIdentityDescription
KGN58808.17.27e-96100.00hypothetical protein Csa_001721 [Cucumis sativus][more]
TQE02657.11.20e-2175.41hypothetical protein C1H46_011726 [Malus baccata][more]
RXH86657.11.54e-2175.41hypothetical protein DVH24_021930 [Malus domestica][more]
AAC19381.11.92e-2175.41inosine-5'-monophosphate dehydrogenase, partial [Prunus persica][more]
XP_021804122.12.39e-2175.41inosine-5'-monophosphate dehydrogenase 2-like, partial [Prunus avium][more]
Match NameE-valueIdentityDescription
A0A0A0LAC33.52e-96100.00IMPDH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G732640 PE=4 ... [more]
A0A540MV315.80e-2275.41IMPDH domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_011726 PE=4 ... [more]
A0A498IWK87.45e-2275.41IMPDH domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_021930 PE=4 ... [more]
O812829.30e-2275.41Inosine-5'-monophosphate dehydrogenase (Fragment) OS=Prunus persica OX=3760 PE=2... [more]
A0A6P5RND71.16e-2175.41inosine-5'-monophosphate dehydrogenase 2-like OS=Prunus avium OX=42229 GN=LOC110... [more]
Match NameE-valueIdentityDescription
AT1G16350.15.4e-1973.77Aldolase-type TIM barrel family protein [more]
AT1G79470.12.3e-1761.33Aldolase-type TIM barrel family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001093IMP dehydrogenase/GMP reductasePFAMPF00478IMPDHcoord: 1..64
e-value: 3.3E-8
score: 32.9
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..74
e-value: 1.1E-10
score: 42.5
NoneNo IPR availablePANTHERPTHR11911:SF123INOSINE-5'-MONOPHOSPHATE DEHYDROGENASEcoord: 1..62
NoneNo IPR availableSUPERFAMILY51412Inosine monophosphate dehydrogenase (IMPDH)coord: 1..65
IPR005990Inosine-5'-monophosphate dehydrogenasePANTHERPTHR11911INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATEDcoord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G029537.1CsGy3G029537.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006177 GMP biosynthetic process
biological_process GO:0006164 purine nucleotide biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003938 IMP dehydrogenase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003824 catalytic activity