CsGy3G028650 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G028650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr3: 29506301 .. 29507776 (+)
RNA-Seq Expression	CsGy3G028650
Synteny	CsGy3G028650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGAAGCTTTAGCGTTGTGAAGAAGAGCAACAACTTCCTCAGAAAACACAGGAAGTGGCCACTTTCATCTCACAAAACCAAATGGCATCAAACCTTCGATCAGGACGAAGCTTTGCGAATCCTAAAACAAGCTGCGAATCCCGACCAACCCCACCTTCTTCTTTCCGCTCTTGTTACCTCCTTCACAGCCTACTCCTGCCACCCAACCCCCAACGCCTACTACTTCGTTCTCAAAACCCTAGCTCGAACCTCCCAATTCCACCACATTCCCCCTGTCCTTCATCGCCTCCAATTCCTCGAGAATTTCCAAACCCCAGAGTACATATTTGTCGACCTCATCAAACTTTACGGACGAATGAACAGAATTCAAGACGCCGTCACCCTTTTTCGTCGGATTCCCATGTTTAGGTGCGTTCCTTCTACGCTTTCACTCAATTCTTTACTTTCCCAGCTCTCTCGGAATGCCCAAGGCCTTCCAATAATTCCTGACATCATTTTGAATAGCCACTCTATGGGTATTAGACTGGAACACTCCACTTTTCAGATACTAATTACTGCCTTATGTAAAGTTAATAAAGTTGGGCACGCAATGGAGCTTTTCAATTATATGATAACAGAGGGCTATGGTCTCAATCCACAAATCTGCTCTTTGATATTGGCATCGCTGTGCCAGCAAAAGAAATCCTCTGGTGATGTGGTTCTTGGCTTTCTGGAAGAAATGAGGCAAAAAGGATTCTGTCCCGCTGTTGTGGATTATTCTAATGTAATTAAGTTTTTCGTTACGAGAGGGATGGGTTCAGATGCTGTTGACCTATTGAATAAAATGAAGGCCGATGGTTTCAAGCCTGACATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATAAAATGGCAGATGAACTGTTTGATGAACTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACATACAACGTGTACATACATGGGTTATGCAAACAAGGTGATTCGGTAGCGGGGCTTCAAATGATTCCGCATATGGAGGCATTGGGGTGCCAACCCAATGTGATTACTTACAATGTTATATTGAAAAGTTTGTGTAAAACCGGTGAACTTGATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCGATGGTTTATTTCATAACGGTGAGGTAATTGAAGCCTGTGTCCTATTGGAGGAAATGCTAGGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTAGTGAGATACTTTCTTGGTTGTGCAAAAGACACATGGTAGGCAAAGCAGTTGAGTTGCTCGCGTTAATGGTAGGAAAGAACTTTTCCCCAGGTCCTAAGGCTTGGGAAATCCTGCTCCTGAGTTCTGAAAGTGAACTAACTTCTGTTAAGAGCCTTGAAACTACTTTAAAAGATTTAGTAGGCATTTGA

mRNA sequence

ATGGTGGGAAGCTTTAGCGTTGTGAAGAAGAGCAACAACTTCCTCAGAAAACACAGGAAGTGGCCACTTTCATCTCACAAAACCAAATGGCATCAAACCTTCGATCAGGACGAAGCTTTGCGAATCCTAAAACAAGCTGCGAATCCCGACCAACCCCACCTTCTTCTTTCCGCTCTTGTTACCTCCTTCACAGCCTACTCCTGCCACCCAACCCCCAACGCCTACTACTTCGTTCTCAAAACCCTAGCTCGAACCTCCCAATTCCACCACATTCCCCCTGTCCTTCATCGCCTCCAATTCCTCGAGAATTTCCAAACCCCAGAGTACATATTTGTCGACCTCATCAAACTTTACGGACGAATGAACAGAATTCAAGACGCCGTCACCCTTTTTCGTCGGATTCCCATGTTTAGGTGCGTTCCTTCTACGCTTTCACTCAATTCTTTACTTTCCCAGCTCTCTCGGAATGCCCAAGGCCTTCCAATAATTCCTGACATCATTTTGAATAGCCACTCTATGGGTATTAGACTGGAACACTCCACTTTTCAGATACTAATTACTGCCTTATGTAAAGTTAATAAAGTTGGGCACGCAATGGAGCTTTTCAATTATATGATAACAGAGGGCTATGGTCTCAATCCACAAATCTGCTCTTTGATATTGGCATCGCTGTGCCAGCAAAAGAAATCCTCTGGTGATGTGGTTCTTGGCTTTCTGGAAGAAATGAGGCAAAAAGGATTCTGTCCCGCTGTTGTGGATTATTCTAATGTAATTAAGTTTTTCGTTACGAGAGGGATGGGTTCAGATGCTGTTGACCTATTGAATAAAATGAAGGCCGATGGTTTCAAGCCTGACATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATAAAATGGCAGATGAACTGTTTGATGAACTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACATACAACGTGTACATACATGGGTTATGCAAACAAGGTGATTCGGTAGCGGGGCTTCAAATGATTCCGCATATGGAGGCATTGGGGTGCCAACCCAATGTGATTACTTACAATGTTATATTGAAAAGTTTGTGTAAAACCGGTGAACTTGATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCGATGGTTTATTTCATAACGGTGAGGTAATTGAAGCCTGTGTCCTATTGGAGGAAATGCTAGGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTAGTGAGATACTTTCTTGGTTGTGCAAAAGACACATGGTAGGCAAAGCAGTTGAGTTGCTCGCGTTAATGGTAGGAAAGAACTTTTCCCCAGGTCCTAAGGCTTGGGAAATCCTGCTCCTGAGTTCTGAAAGTGAACTAACTTCTGTTAAGAGCCTTGAAACTACTTTAAAAGATTTAGTAGGCATTTGA

Coding sequence (CDS)

ATGGTGGGAAGCTTTAGCGTTGTGAAGAAGAGCAACAACTTCCTCAGAAAACACAGGAAGTGGCCACTTTCATCTCACAAAACCAAATGGCATCAAACCTTCGATCAGGACGAAGCTTTGCGAATCCTAAAACAAGCTGCGAATCCCGACCAACCCCACCTTCTTCTTTCCGCTCTTGTTACCTCCTTCACAGCCTACTCCTGCCACCCAACCCCCAACGCCTACTACTTCGTTCTCAAAACCCTAGCTCGAACCTCCCAATTCCACCACATTCCCCCTGTCCTTCATCGCCTCCAATTCCTCGAGAATTTCCAAACCCCAGAGTACATATTTGTCGACCTCATCAAACTTTACGGACGAATGAACAGAATTCAAGACGCCGTCACCCTTTTTCGTCGGATTCCCATGTTTAGGTGCGTTCCTTCTACGCTTTCACTCAATTCTTTACTTTCCCAGCTCTCTCGGAATGCCCAAGGCCTTCCAATAATTCCTGACATCATTTTGAATAGCCACTCTATGGGTATTAGACTGGAACACTCCACTTTTCAGATACTAATTACTGCCTTATGTAAAGTTAATAAAGTTGGGCACGCAATGGAGCTTTTCAATTATATGATAACAGAGGGCTATGGTCTCAATCCACAAATCTGCTCTTTGATATTGGCATCGCTGTGCCAGCAAAAGAAATCCTCTGGTGATGTGGTTCTTGGCTTTCTGGAAGAAATGAGGCAAAAAGGATTCTGTCCCGCTGTTGTGGATTATTCTAATGTAATTAAGTTTTTCGTTACGAGAGGGATGGGTTCAGATGCTGTTGACCTATTGAATAAAATGAAGGCCGATGGTTTCAAGCCTGACATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATAAAATGGCAGATGAACTGTTTGATGAACTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACATACAACGTGTACATACATGGGTTATGCAAACAAGGTGATTCGGTAGCGGGGCTTCAAATGATTCCGCATATGGAGGCATTGGGGTGCCAACCCAATGTGATTACTTACAATGTTATATTGAAAAGTTTGTGTAAAACCGGTGAACTTGATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCGATGGTTTATTTCATAACGGTGAGGTAATTGAAGCCTGTGTCCTATTGGAGGAAATGCTAGGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTAGTGAGATACTTTCTTGGTTGTGCAAAAGACACATGGTAGGCAAAGCAGTTGAGTTGCTCGCGTTAATGGTAGGAAAGAACTTTTCCCCAGGTCCTAAGGCTTGGGAAATCCTGCTCCTGAGTTCTGAAAGTGAACTAACTTCTGTTAAGAGCCTTGAAACTACTTTAAAAGATTTAGTAGGCATTTGA

Protein sequence

MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSLETTLKDLVGI*

Homology

[Close]

BLAST of CsGy3G028650 vs. ExPASy Swiss-Prot
Match: Q8L6Y7 (Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g38420 PE=2 SV=2)

HSP 1 Score: 398.7 bits (1023), Expect = 9.8e-110
Identity = 205/445 (46.07%), Postives = 294/445 (66.07%), Query Frame = 0


Query: 10  KSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHL-LLSALVTSFTAYSC 69
           + +NF+RK+RK P SS KTKW++   Q  A+  L+     D  +  ++  L++SF  ++C
Sbjct: 9   RMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNC 68

Query: 70  HPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAV 129
            PTP AY FV+KTLA++SQ  +I  VL+ L+  E F TPE IF D+I  YG   RI++A+
Sbjct: 69  EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAI 128

Query: 130 TLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITA 189
            +F +IP FRCVPS  +LN+LL  L R  Q L ++P+I++ +  MG+RLE STF ILI A
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188

Query: 190 LCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFC 249
           LC++ +V  A EL  YM  +   ++P++ S +L+S+C+ K SS   V+G+LE++R+  F 
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248

Query: 250 PAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADEL 309
           P + DY+ V++F V  G G + V +LN+MK D  +PD+VCYT+VL GVIAD DY  AD+L
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308

Query: 310 FDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCK 369
           FDELLL GL PD+YTYNVYI+GLCKQ D    L+M+  M  LG +PNV+TYN+++K+L K
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368

Query: 370 TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQIST 429
            G+L  A+ L  +M+  G+  N  TF IMI       EV+ A  LLEE        + S 
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSR 428

Query: 430 FSEILSWLCKRHMVGKAVELLALMV 454
             E++S LC++ ++ +AVELLA +V
Sbjct: 429 IEEVISRLCEKGLMDQAVELLAHLV 453

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BLAST of CsGy3G028650 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-39
Identity = 98/398 (24.62%), Postives = 190/398 (47.74%), Query Frame = 0


Query: 64  TAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENF--QTPEYIFVDLIKLYGRM 123
           + +   P  + +  ++K L R    H + P +  L+ + ++     E  F  +++ Y   
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRA---HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 240

Query: 124 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 183
             +  A+ +  ++  F C  S +S+N ++    +  +    +  I   S+  G   +  T
Sbjct: 241 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 300

Query: 184 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 243
           F  L+  LCK   V HA+E+ + M+ EGY  +    + +++ LC  K       +  L++
Sbjct: 301 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC--KLGEVKEAVEVLDQ 360

Query: 244 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 303
           M  +   P  V Y+ +I          +A +L   + + G  PD+  +  ++ G+    +
Sbjct: 361 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 420

Query: 304 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 363
           +++A ELF+E+   G  PD +TYN+ I  LC +G     L M+  ME  GC  +VITYN 
Sbjct: 421 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 480

Query: 364 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 423
           ++   CK  +  EA ++  +M++ G++ N  T+  +IDGL  +  V +A  L+++M+   
Sbjct: 481 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 540

Query: 424 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSP 460
             P   T++ +L+  C+   + KA +++  M      P
Sbjct: 541 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of CsGy3G028650 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-39
Identity = 102/381 (26.77%), Postives = 186/381 (48.82%), Query Frame = 0


Query: 75  YYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAVTLFRRI 134
           Y  ++    R SQ      +L ++  L  ++        L+  Y    RI DAV L  ++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 182

Query: 135 PMFRCVPSTLSLNSLLSQL---SRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITALCK 194
                 P T++  +L+  L   ++ ++ + ++  ++      G +    T+ +++  LCK
Sbjct: 183 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV----QRGCQPNLVTYGVVVNGLCK 242

Query: 195 VNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCPAV 254
                 A+ L N M       +  I + I+ SLC+ +    D  L   +EM  KG  P V
Sbjct: 243 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNV 302

Query: 255 VDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDE 314
           V YS++I    + G  SDA  LL+ M      P++V +  +++  + +G +  A++L+D+
Sbjct: 303 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 362

Query: 315 LLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGE 374
           ++   + PDI+TYN  ++G C         QM   M +  C P+V+TYN ++K  CK+  
Sbjct: 363 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 422

Query: 375 LDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTFSE 434
           +++  +L  +M  +GL  +  T+  +I GLFH+G+   A  + ++M+    PP I T+S 
Sbjct: 423 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 482

Query: 435 ILSWLCKRHMVGKAVELLALM 453
           +L  LC    + KA+E+   M
Sbjct: 483 LLDGLCNNGKLEKALEVFDYM 496

[Close]

BLAST of CsGy3G028650 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.9e-39
Identity = 104/413 (25.18%), Postives = 191/413 (46.25%), Query Frame = 0


Query: 70  PTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAVT 129
           P    Y  ++    +  + ++   VL R+    +  T   I   L        +++ A+ 
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD----SGKLKQAME 229

Query: 130 LFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITAL 189
           +  R+    C P  ++   L+    R++ G+     ++      G   +  T+ +L+  +
Sbjct: 230 VLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 289

Query: 190 CKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCP 249
           CK  ++  A++  N M + G   N    ++IL S+C   +      L  L +M +KGF P
Sbjct: 290 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL--LADMLRKGFSP 349

Query: 250 AVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELF 309
           +VV ++ +I F   +G+   A+D+L KM   G +P+ + Y  +L+G   +     A E  
Sbjct: 350 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 409

Query: 310 DELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKT 369
           + ++  G  PDI TYN  +  LCK G     ++++  + + GC P +ITYN ++  L K 
Sbjct: 410 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 469

Query: 370 GELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTF 429
           G+  +A KL  +M+ K L  +  T+  ++ GL   G+V EA     E       P   TF
Sbjct: 470 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 529

Query: 430 SEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSLE 483
           + I+  LCK     +A++ L  M+ +   P   ++ IL+     E  + ++LE
Sbjct: 530 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575

[Close]

BLAST of CsGy3G028650 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-38
Identity = 102/382 (26.70%), Postives = 186/382 (48.69%), Query Frame = 0


Query: 111 FVDLIKLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQL---SRNAQGLPIIPDII 170
           F  L+  +    R+ +AV L  R+   +  P  +++++L++ L    R ++ L +I  ++
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202

Query: 171 LNSHSMGIRLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQ 230
                 G + +  T+  ++  LCK      A++LF  M       +    S+++ SLC  
Sbjct: 203 ----EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC-- 262

Query: 231 KKSSGDVVLGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIV 290
           K  S D  L    EM  KG    VV YS++I      G   D   +L +M      PD+V
Sbjct: 263 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 322

Query: 291 CYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHM 350
            ++ +++  + +G    A EL++E++  G+ PD  TYN  I G CK+       QM   M
Sbjct: 323 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 382

Query: 351 EALGCQPNVITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEV 410
            + GC+P+++TY++++ S CK   +D+  +L  ++  KGL  N  T+  ++ G   +G++
Sbjct: 383 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 442

Query: 411 IEACVLLEEMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEIL 470
             A  L +EM+    PP + T+  +L  LC    + KA+E+   M     + G   + I+
Sbjct: 443 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 502

Query: 471 L--LSSESELTSVKSLETTLKD 488
           +  + + S++    SL  +L D
Sbjct: 503 IHGMCNASKVDDAWSLFCSLSD 518

[Close]

BLAST of CsGy3G028650 vs. NCBI nr
Match: XP_004137893.1 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_011651840.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_031737796.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_031737797.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_031737798.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >KGN58708.1 hypothetical protein Csa_002344 [Cucumis sativus])

HSP 1 Score: 983 bits (2541), Expect = 0.0
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0


Query: 1   MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALV 60
           MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALV
Sbjct: 1   MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALV 60

Query: 61  TSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGR 120
           TSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGR
Sbjct: 61  TSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGR 120

Query: 121 MNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHS 180
           MNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHS
Sbjct: 121 MNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHS 180

Query: 181 TFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLE 240
           TFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLE
Sbjct: 181 TFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLE 240

Query: 241 EMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADG 300
           EMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADG
Sbjct: 241 EMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADG 300

Query: 301 DYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYN 360
           DYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYN
Sbjct: 301 DYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYN 360

Query: 361 VILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGS 420
           VILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGS
Sbjct: 361 VILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGS 420

Query: 421 RFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKS 480
           RFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKS
Sbjct: 421 RFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKS 480

Query: 481 LETTLKDLVGI 491
           LETTLKDLVGI
Sbjct: 481 LETTLKDLVGI 491

[Close]

BLAST of CsGy3G028650 vs. NCBI nr
Match: KAA0044213.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRN QGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNTQGLPMIPDILLNSHSMGIRLEHST 180

Query: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEML SR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLRSR 420

Query: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 482 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of CsGy3G028650 vs. NCBI nr
Match: XP_008442346.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo] >XP_008442347.1 PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo] >XP_008442349.1 PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo] >TYK24922.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRNAQGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180

Query: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEML SR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420

Query: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 482 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of CsGy3G028650 vs. NCBI nr
Match: XP_038903517.1 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903518.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903520.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903521.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903522.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903523.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903524.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903525.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903526.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903527.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903528.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903529.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903530.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903531.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida])

HSP 1 Score: 853 bits (2203), Expect = 7.85e-310
Identity = 426/495 (86.06%), Postives = 457/495 (92.32%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPH-----LLL 61
           + SFSVVKKSNNFLRKHRKWP   +KTKWH+TFDQDEALRILKQAAN  +P       LL
Sbjct: 1   MASFSVVKKSNNFLRKHRKWPFPPYKTKWHRTFDQDEALRILKQAANSPKPPNSDEPSLL 60

Query: 62  SALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIK 121
           SAL+TSF AY CHPTPNAY+FVLKTLARTSQFHHI PVL RL+ +E FQTPEYIFVDLIK
Sbjct: 61  SALITSFRAYRCHPTPNAYHFVLKTLARTSQFHHIAPVLDRLERVEKFQTPEYIFVDLIK 120

Query: 122 LYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIR 181
           +YGRM+RIQDAVTLFRRIPMFRCVPSTLSLNSLL  L RN +GL IIP+IILNS +MGIR
Sbjct: 121 VYGRMDRIQDAVTLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIIPEIILNSQTMGIR 180

Query: 182 LEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVL 241
           LE STF+ILITALCK+NKVGHAME+FNYMITEGYGLNP+ICSLILAS+C+QK+SS DVVL
Sbjct: 181 LEDSTFRILITALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASMCEQKRSSSDVVL 240

Query: 242 GFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGV 301
            FLEEMRQKGFCP VVDYSNVIKFFVTRGM SDAVDLLNKMKADGFKPDIVCYTMVLNGV
Sbjct: 241 SFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDAVDLLNKMKADGFKPDIVCYTMVLNGV 300

Query: 302 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNV 361
           IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQG+  AG+QMI HME LGC+PNV
Sbjct: 301 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNLEAGIQMILHMEELGCKPNV 360

Query: 362 ITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEE 421
           ITYN++L+SLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNG+VIEACVLLEE
Sbjct: 361 ITYNILLESLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGDVIEACVLLEE 420

Query: 422 MLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELT 481
           M+GS FPPQISTF EILSWLCKR MVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELT
Sbjct: 421 MVGSCFPPQISTFGEILSWLCKRDMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELT 480

Query: 482 SVKSLETTLKDLVGI 491
           SV+SLETTL+DLVGI
Sbjct: 481 SVQSLETTLEDLVGI 495

[Close]

BLAST of CsGy3G028650 vs. NCBI nr
Match: XP_022157332.1 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 [Momordica charantia] >XP_022157333.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 800 bits (2066), Expect = 5.72e-289
Identity = 397/496 (80.04%), Postives = 441/496 (88.91%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANP------DQPHLL 61
           + SFSVVK+SNNFLRKHRKWP S +KTKWHQTFDQDEALRILKQAAN       DQP+LL
Sbjct: 1   MASFSVVKRSNNFLRKHRKWPFSPYKTKWHQTFDQDEALRILKQAANSPEQSNSDQPYLL 60

Query: 62  LSALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLI 121
            SALV+SF AY CHPTPNAY+FVLKTLARTSQFHHIP VL RL+ +E F+TPEYIF DLI
Sbjct: 61  -SALVSSFKAYCCHPTPNAYHFVLKTLARTSQFHHIPLVLDRLERVEKFETPEYIFADLI 120

Query: 122 KLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGI 181
           K YGRMNRIQDA+T+FRRIPMFRCVPSTLSLN LL  L +N +G+ ++P+IILNS +MGI
Sbjct: 121 KFYGRMNRIQDAITIFRRIPMFRCVPSTLSLNPLLFLLCKNGEGIRMVPEIILNSQAMGI 180

Query: 182 RLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVV 241
           RLE STF+ILITALCK+N+VGHAME+FN MITEGYGLNP ICS IL+SLC+QK+SS   V
Sbjct: 181 RLEESTFRILITALCKINRVGHAMEIFNNMITEGYGLNPGICSFILSSLCEQKRSSSSEV 240

Query: 242 LGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNG 301
           L FLE+MRQKGFCP VVDYSN+IKFFV RGM SDA+DLLNKMKADGFKPDIV YTMVLNG
Sbjct: 241 LSFLEQMRQKGFCPCVVDYSNIIKFFVRRGMSSDALDLLNKMKADGFKPDIVSYTMVLNG 300

Query: 302 VIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPN 361
           VI DGDYKMADELFDELLLFGL+PDIYTYNVYIHGLCKQGD  AG+QMI  ME LGC+PN
Sbjct: 301 VIGDGDYKMADELFDELLLFGLIPDIYTYNVYIHGLCKQGDPGAGIQMISRMEELGCKPN 360

Query: 362 VITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLE 421
           VITYN++L++ CKT +LDEARKLRS+MQLKGLAENL TFRIMI+GLF+NGEVIEAC++LE
Sbjct: 361 VITYNILLETFCKTRKLDEARKLRSEMQLKGLAENLLTFRIMINGLFNNGEVIEACIILE 420

Query: 422 EMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESEL 481
           EMLG  FPPQISTF EILSWLCKR MVGKA+ELL LMVGKNFSPG KAWEILLLSS +EL
Sbjct: 421 EMLGGCFPPQISTFGEILSWLCKRGMVGKALELLTLMVGKNFSPGAKAWEILLLSSGNEL 480

Query: 482 TSVKSLETTLKDLVGI 491
           TSVKSLETTL DLVG+
Sbjct: 481 TSVKSLETTLGDLVGV 495

[Close]

BLAST of CsGy3G028650 vs. ExPASy TrEMBL
Match: A0A0A0LA35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730720 PE=4 SV=1)

HSP 1 Score: 983 bits (2541), Expect = 0.0
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0


Query: 1   MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALV 60
           MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALV
Sbjct: 1   MVGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALV 60

Query: 61  TSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGR 120
           TSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGR
Sbjct: 61  TSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGR 120

Query: 121 MNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHS 180
           MNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHS
Sbjct: 121 MNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHS 180

Query: 181 TFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLE 240
           TFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLE
Sbjct: 181 TFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLE 240

Query: 241 EMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADG 300
           EMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADG
Sbjct: 241 EMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADG 300

Query: 301 DYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYN 360
           DYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYN
Sbjct: 301 DYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYN 360

Query: 361 VILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGS 420
           VILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGS
Sbjct: 361 VILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGS 420

Query: 421 RFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKS 480
           RFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKS
Sbjct: 421 RFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKS 480

Query: 481 LETTLKDLVGI 491
           LETTLKDLVGI
Sbjct: 481 LETTLKDLVGI 491

[Close]

BLAST of CsGy3G028650 vs. ExPASy TrEMBL
Match: A0A1S3B651 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486244 PE=4 SV=1)

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRNAQGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180

Query: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEML SR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420

Query: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 482 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of CsGy3G028650 vs. ExPASy TrEMBL
Match: A0A5D3DN26 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00370 PE=4 SV=1)

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRNAQGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180

Query: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEML SR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420

Query: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 482 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of CsGy3G028650 vs. ExPASy TrEMBL
Match: A0A5A7TL23 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005720 PE=4 SV=1)

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRN QGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNTQGLPMIPDILLNSHSMGIRLEHST 180

Query: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEML SR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLRSR 420

Query: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 482 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of CsGy3G028650 vs. ExPASy TrEMBL
Match: A0A6J1DU83 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024060 PE=4 SV=1)

HSP 1 Score: 800 bits (2066), Expect = 2.77e-289
Identity = 397/496 (80.04%), Postives = 441/496 (88.91%), Query Frame = 0


Query: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANP------DQPHLL 61
           + SFSVVK+SNNFLRKHRKWP S +KTKWHQTFDQDEALRILKQAAN       DQP+LL
Sbjct: 1   MASFSVVKRSNNFLRKHRKWPFSPYKTKWHQTFDQDEALRILKQAANSPEQSNSDQPYLL 60

Query: 62  LSALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLI 121
            SALV+SF AY CHPTPNAY+FVLKTLARTSQFHHIP VL RL+ +E F+TPEYIF DLI
Sbjct: 61  -SALVSSFKAYCCHPTPNAYHFVLKTLARTSQFHHIPLVLDRLERVEKFETPEYIFADLI 120

Query: 122 KLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGI 181
           K YGRMNRIQDA+T+FRRIPMFRCVPSTLSLN LL  L +N +G+ ++P+IILNS +MGI
Sbjct: 121 KFYGRMNRIQDAITIFRRIPMFRCVPSTLSLNPLLFLLCKNGEGIRMVPEIILNSQAMGI 180

Query: 182 RLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVV 241
           RLE STF+ILITALCK+N+VGHAME+FN MITEGYGLNP ICS IL+SLC+QK+SS   V
Sbjct: 181 RLEESTFRILITALCKINRVGHAMEIFNNMITEGYGLNPGICSFILSSLCEQKRSSSSEV 240

Query: 242 LGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNG 301
           L FLE+MRQKGFCP VVDYSN+IKFFV RGM SDA+DLLNKMKADGFKPDIV YTMVLNG
Sbjct: 241 LSFLEQMRQKGFCPCVVDYSNIIKFFVRRGMSSDALDLLNKMKADGFKPDIVSYTMVLNG 300

Query: 302 VIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPN 361
           VI DGDYKMADELFDELLLFGL+PDIYTYNVYIHGLCKQGD  AG+QMI  ME LGC+PN
Sbjct: 301 VIGDGDYKMADELFDELLLFGLIPDIYTYNVYIHGLCKQGDPGAGIQMISRMEELGCKPN 360

Query: 362 VITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLE 421
           VITYN++L++ CKT +LDEARKLRS+MQLKGLAENL TFRIMI+GLF+NGEVIEAC++LE
Sbjct: 361 VITYNILLETFCKTRKLDEARKLRSEMQLKGLAENLLTFRIMINGLFNNGEVIEACIILE 420

Query: 422 EMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESEL 481
           EMLG  FPPQISTF EILSWLCKR MVGKA+ELL LMVGKNFSPG KAWEILLLSS +EL
Sbjct: 421 EMLGGCFPPQISTFGEILSWLCKRGMVGKALELLTLMVGKNFSPGAKAWEILLLSSGNEL 480

Query: 482 TSVKSLETTLKDLVGI 491
           TSVKSLETTL DLVG+
Sbjct: 481 TSVKSLETTLGDLVGV 495

[Close]

BLAST of CsGy3G028650 vs. TAIR 10
Match: AT2G38420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 398.7 bits (1023), Expect = 6.9e-111
Identity = 205/445 (46.07%), Postives = 294/445 (66.07%), Query Frame = 0


Query: 10  KSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHL-LLSALVTSFTAYSC 69
           + +NF+RK+RK P SS KTKW++   Q  A+  L+     D  +  ++  L++SF  ++C
Sbjct: 9   RMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNC 68

Query: 70  HPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAV 129
            PTP AY FV+KTLA++SQ  +I  VL+ L+  E F TPE IF D+I  YG   RI++A+
Sbjct: 69  EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAI 128

Query: 130 TLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITA 189
            +F +IP FRCVPS  +LN+LL  L R  Q L ++P+I++ +  MG+RLE STF ILI A
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188

Query: 190 LCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFC 249
           LC++ +V  A EL  YM  +   ++P++ S +L+S+C+ K SS   V+G+LE++R+  F 
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248

Query: 250 PAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADEL 309
           P + DY+ V++F V  G G + V +LN+MK D  +PD+VCYT+VL GVIAD DY  AD+L
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308

Query: 310 FDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCK 369
           FDELLL GL PD+YTYNVYI+GLCKQ D    L+M+  M  LG +PNV+TYN+++K+L K
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368

Query: 370 TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQIST 429
            G+L  A+ L  +M+  G+  N  TF IMI       EV+ A  LLEE        + S 
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSR 428

Query: 430 FSEILSWLCKRHMVGKAVELLALMV 454
             E++S LC++ ++ +AVELLA +V
Sbjct: 429 IEEVISRLCEKGLMDQAVELLAHLV 453

[Close]

BLAST of CsGy3G028650 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-40
Identity = 98/398 (24.62%), Postives = 190/398 (47.74%), Query Frame = 0


Query: 64  TAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENF--QTPEYIFVDLIKLYGRM 123
           + +   P  + +  ++K L R    H + P +  L+ + ++     E  F  +++ Y   
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRA---HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 240

Query: 124 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 183
             +  A+ +  ++  F C  S +S+N ++    +  +    +  I   S+  G   +  T
Sbjct: 241 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 300

Query: 184 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 243
           F  L+  LCK   V HA+E+ + M+ EGY  +    + +++ LC  K       +  L++
Sbjct: 301 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC--KLGEVKEAVEVLDQ 360

Query: 244 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 303
           M  +   P  V Y+ +I          +A +L   + + G  PD+  +  ++ G+    +
Sbjct: 361 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 420

Query: 304 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 363
           +++A ELF+E+   G  PD +TYN+ I  LC +G     L M+  ME  GC  +VITYN 
Sbjct: 421 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 480

Query: 364 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 423
           ++   CK  +  EA ++  +M++ G++ N  T+  +IDGL  +  V +A  L+++M+   
Sbjct: 481 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 540

Query: 424 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSP 460
             P   T++ +L+  C+   + KA +++  M      P
Sbjct: 541 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of CsGy3G028650 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-40
Identity = 102/381 (26.77%), Postives = 186/381 (48.82%), Query Frame = 0


Query: 75  YYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAVTLFRRI 134
           Y  ++    R SQ      +L ++  L  ++        L+  Y    RI DAV L  ++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 182

Query: 135 PMFRCVPSTLSLNSLLSQL---SRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITALCK 194
                 P T++  +L+  L   ++ ++ + ++  ++      G +    T+ +++  LCK
Sbjct: 183 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV----QRGCQPNLVTYGVVVNGLCK 242

Query: 195 VNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCPAV 254
                 A+ L N M       +  I + I+ SLC+ +    D  L   +EM  KG  P V
Sbjct: 243 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNV 302

Query: 255 VDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDE 314
           V YS++I    + G  SDA  LL+ M      P++V +  +++  + +G +  A++L+D+
Sbjct: 303 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 362

Query: 315 LLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGE 374
           ++   + PDI+TYN  ++G C         QM   M +  C P+V+TYN ++K  CK+  
Sbjct: 363 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 422

Query: 375 LDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTFSE 434
           +++  +L  +M  +GL  +  T+  +I GLFH+G+   A  + ++M+    PP I T+S 
Sbjct: 423 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 482

Query: 435 ILSWLCKRHMVGKAVELLALM 453
           +L  LC    + KA+E+   M
Sbjct: 483 LLDGLCNNGKLEKALEVFDYM 496

[Close]

BLAST of CsGy3G028650 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 4.9e-40
Identity = 104/413 (25.18%), Postives = 191/413 (46.25%), Query Frame = 0


Query: 70  PTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAVT 129
           P    Y  ++    +  + ++   VL R+    +  T   I   L        +++ A+ 
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD----SGKLKQAME 229

Query: 130 LFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITAL 189
           +  R+    C P  ++   L+    R++ G+     ++      G   +  T+ +L+  +
Sbjct: 230 VLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 289

Query: 190 CKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCP 249
           CK  ++  A++  N M + G   N    ++IL S+C   +      L  L +M +KGF P
Sbjct: 290 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL--LADMLRKGFSP 349

Query: 250 AVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELF 309
           +VV ++ +I F   +G+   A+D+L KM   G +P+ + Y  +L+G   +     A E  
Sbjct: 350 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 409

Query: 310 DELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKT 369
           + ++  G  PDI TYN  +  LCK G     ++++  + + GC P +ITYN ++  L K 
Sbjct: 410 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 469

Query: 370 GELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTF 429
           G+  +A KL  +M+ K L  +  T+  ++ GL   G+V EA     E       P   TF
Sbjct: 470 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 529

Query: 430 SEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSLE 483
           + I+  LCK     +A++ L  M+ +   P   ++ IL+     E  + ++LE
Sbjct: 530 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575

[Close]

BLAST of CsGy3G028650 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-39
Identity = 102/382 (26.70%), Postives = 186/382 (48.69%), Query Frame = 0


Query: 111 FVDLIKLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQL---SRNAQGLPIIPDII 170
           F  L+  +    R+ +AV L  R+   +  P  +++++L++ L    R ++ L +I  ++
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202

Query: 171 LNSHSMGIRLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQ 230
                 G + +  T+  ++  LCK      A++LF  M       +    S+++ SLC  
Sbjct: 203 ----EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC-- 262

Query: 231 KKSSGDVVLGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIV 290
           K  S D  L    EM  KG    VV YS++I      G   D   +L +M      PD+V
Sbjct: 263 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 322

Query: 291 CYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHM 350
            ++ +++  + +G    A EL++E++  G+ PD  TYN  I G CK+       QM   M
Sbjct: 323 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 382

Query: 351 EALGCQPNVITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEV 410
            + GC+P+++TY++++ S CK   +D+  +L  ++  KGL  N  T+  ++ G   +G++
Sbjct: 383 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 442

Query: 411 IEACVLLEEMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEIL 470
             A  L +EM+    PP + T+  +L  LC    + KA+E+   M     + G   + I+
Sbjct: 443 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 502

Query: 471 L--LSSESELTSVKSLETTLKD 488
           +  + + S++    SL  +L D
Sbjct: 503 IHGMCNASKVDDAWSLFCSLSD 518

The following BLAST results are available for this feature:

BLAST of CsGy3G028650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L6Y7	9.8e-110	46.07	Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidop...	[more]
Q9LFF1	1.8e-39	24.62	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9SXD8	3.1e-39	26.77	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	6.9e-39	25.18	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q6NQ83	1.5e-38	26.70	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy3G028650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137893.1	0.0	100.00	pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sa...	[more]
KAA0044213.1	0.0	92.45	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008442346.1	0.0	92.45	PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial ...	[more]
XP_038903517.1	7.85e-310	86.06	pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa ...	[more]
XP_022157332.1	5.72e-289	80.04	pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 ...	[more]

BLAST of CsGy3G028650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA35	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730720 PE=4 SV=1	[more]
A0A1S3B651	0.0	92.45	pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Cucumis ...	[more]
A0A5D3DN26	0.0	92.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7TL23	0.0	92.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DU83	2.77e-289	80.04	pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 ...	[more]

BLAST of CsGy3G028650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38420.1	6.9e-111	46.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	1.3e-40	24.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62590.1	2.2e-40	26.77	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G09900.1	4.9e-40	25.18	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G22470.1	1.1e-39	26.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 174..205 e-value: 3.6E-6 score: 26.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 319..368 e-value: 1.1E-13 score: 51.2 coord: 249..296 e-value: 4.0E-9 score: 36.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 393..420 e-value: 3.5E-4 score: 20.6 coord: 114..135 e-value: 1.2 score: 9.5 coord: 428..457 e-value: 0.93 score: 9.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 287..321 e-value: 1.6E-4 score: 19.6 coord: 254..286 e-value: 7.5E-5 score: 20.7 coord: 322..356 e-value: 1.6E-5 score: 22.7 coord: 181..212 e-value: 2.8E-5 score: 22.0 coord: 357..387 e-value: 1.5E-6 score: 26.0 coord: 428..459 e-value: 8.0E-4 score: 17.4 coord: 393..424 e-value: 4.1E-5 score: 21.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 9.667924
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 425..459 score: 8.637562
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..354 score: 11.005202
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 390..424 score: 10.029647
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 11.695765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 250..284 score: 9.086975
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..212 score: 9.185627
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 232..339 e-value: 8.6E-25 score: 89.1 coord: 8..160 e-value: 1.9E-6 score: 29.3 coord: 166..231 e-value: 3.2E-7 score: 31.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 340..486 e-value: 5.7E-29 score: 103.5
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 6..480
None	No IPR available	PANTHER	PTHR47933:SF13	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 6..480

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G028650.1	CsGy3G028650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding