CsGy3G027020 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G027020
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 28115117 .. 28115473 (+)
RNA-Seq ExpressionCsGy3G027020
SyntenyCsGy3G027020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTTGTTGTTCCTCTCATACAATTACCAAACCTTTACCATCACTACTCCCACTCCCAACACCCAATACGAATCAAAGCCCACACGCTTTTACATTCATTCATTTCCTCATCGTCATTGTCTTCGTCTCTCCTCATCTTCCTCACTTTCCCCATCTCTCCGACGGATTTCCGGCCGTTCATCTCTGTTGACTCTACTTGGTATCCTTCAATTCTTTCTCTTCTTTGTCAATTTCTCCTTAATTATGCTTTCTTTCTCATTTATTGCTTTTCGGTGCCCAGAGTTTCAGTATTTCCCAGCTGGGCTCCTGTGTTCTCAACCCTTCAACCTCTTCAACTCCTTGCTTTTTCATGA

mRNA sequence

ATGGGTGTTGTTGTTCCTCTCATACAATTACCAAACCTTTACCATCACTACTCCCACTCCCAACACCCAATACGAATCAAAGCCCACACGCTTTTACATTCATTCATTTCCTCATCGTCATTGTCTTCGTCTCTCCTCATCTTCCTCACTTTCCCCATCTCTCCGACGGATTTCCGGCCGTTCATCTCTGTTGACTCTACTTGGTATCCTTCAATTCTTTCTCTTCTTTGTCAATTTCTCCTTAATTATGCTTTCTTTCTCATTTATTGCTTTTCGGTGCCCAGAGTTTCAGTATTTCCCAGCTGGGCTCCTGTGTTCTCAACCCTTCAACCTCTTCAACTCCTTGCTTTTTCATGA

Coding sequence (CDS)

ATGGGTGTTGTTGTTCCTCTCATACAATTACCAAACCTTTACCATCACTACTCCCACTCCCAACACCCAATACGAATCAAAGCCCACACGCTTTTACATTCATTCATTTCCTCATCGTCATTGTCTTCGTCTCTCCTCATCTTCCTCACTTTCCCCATCTCTCCGACGGATTTCCGGCCGTTCATCTCTGTTGACTCTACTTGGTATCCTTCAATTCTTTCTCTTCTTTGTCAATTTCTCCTTAATTATGCTTTCTTTCTCATTTATTGCTTTTCGGTGCCCAGAGTTTCAGTATTTCCCAGCTGGGCTCCTGTGTTCTCAACCCTTCAACCTCTTCAACTCCTTGCTTTTTCATGA

Protein sequence

MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTFPISPTDFRPFISVDSTWYPSILSLLCQFLLNYAFFLIYCFSVPRVSVFPSWAPVFSTLQPLQLLAFS*
Homology
[Close]
BLAST of CsGy3G027020 vs. NCBI nr
Match: KGN58530.1 (hypothetical protein Csa_000893 [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 3.24e-32
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTFPISPTDFRP 60
          MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTF ISPTDFRP
Sbjct: 1  MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTFLISPTDFRP 60

Query: 61 FIS 63
          FIS
Sbjct: 61 FIS 63

[Close]
BLAST of CsGy3G027020 vs. ExPASy TrEMBL
Match: A0A0A0L9D4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G664540 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 1.57e-32
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTFPISPTDFRP 60
          MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTF ISPTDFRP
Sbjct: 1  MGVVVPLIQLPNLYHHYSHSQHPIRIKAHTLLHSFISSSSLSSSLLIFLTFLISPTDFRP 60

Query: 61 FIS 63
          FIS
Sbjct: 61 FIS 63

The following BLAST results are available for this feature:
BLAST of CsGy3G027020 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G027020 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58530.13.24e-3298.41hypothetical protein Csa_000893 [Cucumis sativus][more]
BLAST of CsGy3G027020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9D41.57e-3298.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G664540 PE=4 SV=1[more]
BLAST of CsGy3G027020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G027020.2CsGy3G027020.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane