CsGy3G024795 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G024795
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	cyclic nucleotide-gated ion channel 1-like
Location	Gy14Chr3: 25063089 .. 25064323 (-)
RNA-Seq Expression	CsGy3G024795
Synteny	CsGy3G024795

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAACTTGGCCGATGGAATATCTAGAGGATTGTTCTCATCATTTTTATGGTTGGTGTTGCTATTCCTTCGATTACATCTATCCTTATACCTGTTGTTTCTGTCACTTCCATCAGTAGAGGTATTGATTTTAAGTCTTTTCATCTTCGGCCTTGATACCCCGTGCTTCGTTTTCAATGGACATCTTCAACATTTCTGATTTTGTAACTTGGGTTGTGTTGTGTTTTTCTTTGGGTATACGTACATACTATTAGGAATCCATGAATGTTTTATTTTTATATTGAAGTTTTTGGGTAATGATAAATTATTCTTCCTTTGTTGCTCTGTTTTTCAATCATTGACTGAGAAAAAGGTTACTGATTTACTCGAAAACGAAAAAAGGAAAGTTATACAATATAAGTTAATAATTATTTCCCTATTTTCGTTACTAAACTTCATTTTATATTTTATTATATTAAATAATATTACTAAAGGTTGATAACTCCTAAGGGGCCGTTTGATAACTACCTCATTAAACTTAAAAGATCCAAGTTTGAGATTTGCCGATGATCTGTTAAGTTTTCTTAACTTCTAACCTCACCCCCTCCCCATGAGACCACCACCAAGCCATGTTGGTTATAACATTCTCCAATATATTTGAAGTAACTTTCAAAGATAACATTTTTAAATGATAACTCAAATTAACACTTGTTTGTTGAAATTAGGAGATCACTTTTCAACTTCCAAAACTCTCATCTAGTACAAATAACTTAAGTTTAGAAGATAATGAAGTGTGATAGTATCATCTCATGTGTGATCAAATGCAATTTGCAGCTCATTTGGGTCAAACCTGACTACAAGTAGCAGTTCATCTGAAAACATCTTTGCGGCTCTCATTACCATTATTGGGATCCTTCTAGTTGTTTATCTTATCGGCAACTTGCAGGTTTGTTAAAGATCTTCTCATCCAATATGTAAACCTTTCCTTTTCTAAGTCAGTAACAAAGAAATGACTGCATCTTTAAACAGGTATATCTGCAGTCCTCAACTTTAAGATCAGAGGAGAAACGGAGGACGATGAAAAAGAAAGATGGTGAAATAGATTTCTGGATAGATTATTATGAGTTTCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGAGTGGAAAAATGATGTCAATTTGAAAACACTGCTCGACGTGTTTCCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGA

mRNA sequence

ATGTACAACTTGGCCGATGGAATATCTAGAGGATTGTTCTCATCATTTTTATGCTCATTTGGGTCAAACCTGACTACAAGTAGCAGTTCATCTGAAAACATCTTTGCGGCTCTCATTACCATTATTGGGATCCTTCTAGTTGTTTATCTTATCGGCAACTTGCAGGTATATCTGCAGTCCTCAACTTTAAGATCAGAGGAGAAACGGAGGACGATGAAAAAGAAAGATGGTGAAATAGATTTCTGGATAGATTATTATGAGTTTCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGAGTGGAAAAATGATGTCAATTTGAAAACACTGCTCGACGTGTTTCCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGA

Coding sequence (CDS)

ATGTACAACTTGGCCGATGGAATATCTAGAGGATTGTTCTCATCATTTTTATGCTCATTTGGGTCAAACCTGACTACAAGTAGCAGTTCATCTGAAAACATCTTTGCGGCTCTCATTACCATTATTGGGATCCTTCTAGTTGTTTATCTTATCGGCAACTTGCAGGTATATCTGCAGTCCTCAACTTTAAGATCAGAGGAGAAACGGAGGACGATGAAAAAGAAAGATGGTGAAATAGATTTCTGGATAGATTATTATGAGTTTCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGAGTGGAAAAATGATGTCAATTTGAAAACACTGCTCGACGTGTTTCCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGA

Protein sequence

MYNLADGISRGLFSSFLCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL*

Homology

[Close]

BLAST of CsGy3G024795 vs. ExPASy Swiss-Prot
Match: Q9SJA4 (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 GN=CNGC14 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 9.8e-09
Identity = 42/115 (36.52%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L S+G NL+TS+S  E +FA L+ I G++L   LIGN+Q YLQS T+R EE R  +K++D
Sbjct: 361 LSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWR--LKRRD 420

Query: 77  GEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +    +  ++ ++ FV+ K+     V+ +T+L   P+    +I++ L
Sbjct: 421 TE--EWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHL 471

[Close]

BLAST of CsGy3G024795 vs. ExPASy Swiss-Prot
Match: Q8L7Z0 (Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-08
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L S+G NL+T+    E  FA LI I G++L  +LIGN+Q YLQS T+R EE R  +KK+D
Sbjct: 361 LSSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWR--LKKRD 420

Query: 77  GEIDFWIDYYEFQKKKEIKEFVR--DKFEW--KNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +   Q  +E++  VR  ++++W     V+ + LL   P+    +I++ L
Sbjct: 421 TE--EWMRHR--QLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHL 471

[Close]

BLAST of CsGy3G024795 vs. ExPASy Swiss-Prot
Match: Q9SKD7 (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 8.3e-08
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L + G NL TS+   E IFA +I I G++L   LIGN+Q YLQS+T+R EE R  +K++D
Sbjct: 357 LSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMR--VKRRD 416

Query: 77  GEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +       +K I+++ + K++    V  + LL   P    ++IK+ L
Sbjct: 417 AE--QWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHL 467

[Close]

BLAST of CsGy3G024795 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L S G NL TS+   E  FA  I+I G++L  +LIGN+Q YLQS+T R EE R  +K++D
Sbjct: 366 LSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMR--VKRRD 425

Query: 77  GEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +    +  +K I+ + + K++    V+ + LL   P     +IK+ L
Sbjct: 426 AE--QWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHL 476

[Close]

BLAST of CsGy3G024795 vs. ExPASy Swiss-Prot
Match: Q9LNJ0 (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L + G NL TS    E IFA  I I G++L   LIGN+Q YL+S+T+R EE R  ++K+D
Sbjct: 353 LSALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMR--VRKRD 412

Query: 77  GEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +    +  +K I+ + + +++    V  +TLL   P     +IK+ L
Sbjct: 413 AE--QWMSHRMLPEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHL 463

[Close]

BLAST of CsGy3G024795 vs. NCBI nr
Match: KAE8650812.1 (hypothetical protein Csa_023859, partial [Cucumis sativus])

HSP 1 Score: 211 bits (536), Expect = 3.74e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 19  SFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGE 78
           SFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGE
Sbjct: 1   SFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKDGE 60

Query: 79  IDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
           IDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL
Sbjct: 61  IDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 111

[Close]

BLAST of CsGy3G024795 vs. NCBI nr
Match: XP_016900694.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo] >XP_016900695.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 192 bits (487), Expect = 1.16e-56
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD
Sbjct: 188 LSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRTMQKKD 247

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDVF SPFVEEIKKEL
Sbjct: 248 VEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKEL 300

[Close]

BLAST of CsGy3G024795 vs. NCBI nr
Match: XP_008449547.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 192 bits (487), Expect = 1.09e-55
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD
Sbjct: 295 LSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRTMQKKD 354

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDVF SPFVEEIKKEL
Sbjct: 355 VEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKEL 407

[Close]

BLAST of CsGy3G024795 vs. NCBI nr
Match: TYK31713.1 (cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 193 bits (491), Expect = 2.78e-55
Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLTTSS + ENIFAAL+TI+GILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKK 
Sbjct: 254 LSSFGSNLTTSSYACENIFAALVTIVGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKG 313

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EIDFWIDYY+FQKKKEIKEFV DKFEW+NDVNLKTLLDVFPSPFVEEIKKEL
Sbjct: 314 VEIDFWIDYYKFQKKKEIKEFVIDKFEWQNDVNLKTLLDVFPSPFVEEIKKEL 366

[Close]

BLAST of CsGy3G024795 vs. NCBI nr
Match: XP_011651604.1 (cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 186 bits (473), Expect = 1.35e-54
Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLTTSS   EN FAAL+TI GILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD
Sbjct: 186 LSSFGSNLTTSSYVWENFFAALVTISGILLVVYLIGNLQVYLQSSTLRSEEKRRTMQKKD 245

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EID WIDYY+FQKKKEIKEFVR+KFEWKNDVNL TLLDVFPSPF EEIKKEL
Sbjct: 246 AEIDLWIDYYKFQKKKEIKEFVREKFEWKNDVNLITLLDVFPSPFAEEIKKEL 298

[Close]

BLAST of CsGy3G024795 vs. ExPASy TrEMBL
Match: A0A1S4DYA3 (cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 5.60e-57
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD
Sbjct: 188 LSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRTMQKKD 247

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDVF SPFVEEIKKEL
Sbjct: 248 VEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKEL 300

[Close]

BLAST of CsGy3G024795 vs. ExPASy TrEMBL
Match: A0A1S3BLM4 (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 5.26e-56
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQVYLQSSTLRSEEKRRTM+KKD
Sbjct: 295 LSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRTMQKKD 354

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDVF SPFVEEIKKEL
Sbjct: 355 VEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKEL 407

[Close]

BLAST of CsGy3G024795 vs. ExPASy TrEMBL
Match: A0A5D3E6K4 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G00140 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 1.35e-55
Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLTTSS + ENIFAAL+TI+GILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKK 
Sbjct: 254 LSSFGSNLTTSSYACENIFAALVTIVGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKG 313

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EIDFWIDYY+FQKKKEIKEFV DKFEW+NDVNLKTLLDVFPSPFVEEIKKEL
Sbjct: 314 VEIDFWIDYYKFQKKKEIKEFVIDKFEWQNDVNLKTLLDVFPSPFVEEIKKEL 366

[Close]

BLAST of CsGy3G024795 vs. ExPASy TrEMBL
Match: A0A5A7V0L3 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00660 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 3.12e-54
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQV-YLQSSTLRSEEKRRTMKKK 76
           L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQV YLQSSTLRSEEKRRTM+KK
Sbjct: 295 LSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVLYLQSSTLRSEEKRRTMQKK 354

Query: 77  DGEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
           D EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDVF SPFVEEIKKEL
Sbjct: 355 DVEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKEL 408

[Close]

BLAST of CsGy3G024795 vs. ExPASy TrEMBL
Match: A0A5D3DCD7 (Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00390 PE=4 SV=1)

HSP 1 Score: 179 bits (454), Expect = 3.44e-51
Identity = 99/113 (87.61%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L SFGSNLT SS SSENIFAALITI+ ILLVVYLIGNLQ    SSTLRSEEKRRTM+KKD
Sbjct: 295 LSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQ----SSTLRSEEKRRTMQKKD 354

Query: 77  GEIDFWIDYYEFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 129
            EID WIDYY FQKKKEIKEFVRDKFEWKNDVNLKTLLDVF SPFVEEIKKEL
Sbjct: 355 VEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKEL 403

[Close]

BLAST of CsGy3G024795 vs. TAIR 10
Match: AT2G24610.1 (cyclic nucleotide-gated channel 14 )

HSP 1 Score: 61.2 bits (147), Expect = 6.9e-10
Identity = 42/115 (36.52%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L S+G NL+TS+S  E +FA L+ I G++L   LIGN+Q YLQS T+R EE R  +K++D
Sbjct: 361 LSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWR--LKRRD 420

Query: 77  GEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +    +  ++ ++ FV+ K+     V+ +T+L   P+    +I++ L
Sbjct: 421 TE--EWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHL 471

[Close]

BLAST of CsGy3G024795 vs. TAIR 10
Match: AT4G30360.1 (cyclic nucleotide-gated channel 17 )

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-09
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L S+G NL+T+    E  FA LI I G++L  +LIGN+Q YLQS T+R EE R  +KK+D
Sbjct: 361 LSSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWR--LKKRD 420

Query: 77  GEIDFWIDYYEFQKKKEIKEFVR--DKFEW--KNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +   Q  +E++  VR  ++++W     V+ + LL   P+    +I++ L
Sbjct: 421 TE--EWMRHR--QLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHL 471

[Close]

BLAST of CsGy3G024795 vs. TAIR 10
Match: AT2G46430.1 (cyclic nucleotide gated channel 3 )

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-09
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L + G NL TS+   E IFA +I I G++L   LIGN+Q YLQS+T+R EE R  +K++D
Sbjct: 357 LSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMR--VKRRD 416

Query: 77  GEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +       +K I+++ + K++    V  + LL   P    ++IK+ L
Sbjct: 417 AE--QWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHL 467

[Close]

BLAST of CsGy3G024795 vs. TAIR 10
Match: AT2G46430.2 (cyclic nucleotide gated channel 3 )

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-09
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L + G NL TS+   E IFA +I I G++L   LIGN+Q YLQS+T+R EE R  +K++D
Sbjct: 357 LSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMR--VKRRD 416

Query: 77  GEIDFWIDYYEF--QKKKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +       +K I+++ + K++    V  + LL   P    ++IK+ L
Sbjct: 417 AE--QWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHL 467

[Close]

BLAST of CsGy3G024795 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 17  LCSFGSNLTTSSSSSENIFAALITIIGILLVVYLIGNLQVYLQSSTLRSEEKRRTMKKKD 76
           L S G NL TS+   E  FA  I+I G++L  +LIGN+Q YLQS+T R EE R  +K++D
Sbjct: 366 LSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMR--VKRRD 425

Query: 77  GEIDFWIDYYEFQK--KKEIKEFVRDKFEWKNDVNLKTLLDVFPSPFVEEIKKEL 130
            E   W+ +    +  +K I+ + + K++    V+ + LL   P     +IK+ L
Sbjct: 426 AE--QWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHL 476

The following BLAST results are available for this feature:

BLAST of CsGy3G024795 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJA4	9.8e-09	36.52	Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8L7Z0	6.3e-08	37.61	Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17...	[more]
Q9SKD7	8.3e-08	36.52	Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
O65717	1.8e-07	36.52	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q9LNJ0	7.0e-07	35.65	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsGy3G024795 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650812.1	3.74e-68	100.00	hypothetical protein Csa_023859, partial [Cucumis sativus]	[more]
XP_016900694.1	1.16e-56	91.15	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo] ...	[more]
XP_008449547.1	1.09e-55	91.15	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]
TYK31713.1	2.78e-55	90.27	cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011651604.1	1.35e-54	87.61	cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus]	[more]

BLAST of CsGy3G024795 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DYA3	5.60e-57	91.15	cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3BLM4	5.26e-56	91.15	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3E6K4	1.35e-55	90.27	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A5A7V0L3	3.12e-54	90.35	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A5D3DCD7	3.44e-51	87.61	Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuw...	[more]

BLAST of CsGy3G024795 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24610.1	6.9e-10	36.52	cyclic nucleotide-gated channel 14	[more]
AT4G30360.1	4.5e-09	37.61	cyclic nucleotide-gated channel 17	[more]
AT2G46430.1	5.9e-09	36.52	cyclic nucleotide gated channel 3	[more]
AT2G46430.2	5.9e-09	36.52	cyclic nucleotide gated channel 3	[more]
AT5G53130.1	1.3e-08	36.52	cyclic nucleotide gated channel 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45651:SF65	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1-LIKE	coord: 17..129
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 17..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G024795.1	CsGy3G024795.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005216	ion channel activity