CsGy3G024697 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G024697
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DUF1985 domain-containing protein
Location	Gy14Chr3: 24943740 .. 24944621 (+)
RNA-Seq Expression	CsGy3G024697
Synteny	CsGy3G024697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAATAGGGTATCAAGTTGTGATAGATTCAATAAAGAAGTCTATAAAAAAAACCCTTCAGCTCTAGCAGTAGGTATTTCTGGATTTGCTTATGTAGTTTTAACATGGGCATACAAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGCTAAAAGAGTAAGCTATGTAAATCGAAATATATTCAAATGTATTATGTATATATATAAAATGCCCAAATATACTTATCTTCGATACTTTTCAAATTTCAGTTTGTGTTCAAGGGGTTGTTTGTTGATGAAGATGTCATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGTATGATATTATTACTAGTATATGTATTTTTTCTTTATTAGTGAAACACGTATGTAAATTATATATTTAGTAATTTGCATATATTCTTGACTGACAGGATGAACAGAACGAGAGCTTAGATGACATGGTATACAACATAGCTCTACTAAAGGAAGCAGAAGAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTTAA

mRNA sequence

ATGGGGAAGAATAGGGTATCAAGTTGTGATAGATTCAATAAAGAAGTCTATAAAAAAAACCCTTCAGCTCTAGCAGTAGGTATTTCTGGATTTGCTTATGTAGTTTTAACATGGGCATACAAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGCTAAAAGAGTAAGCTATTTTGTGTTCAAGGGGTTGTTTGTTGATGAAGATGTCATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGATGAACAGAACGAGAGCTTAGATGACATGGTATACAACATAGCTCTACTAAAGGAAGCAGAAGAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTTAA

Coding sequence (CDS)

ATGGGGAAGAATAGGGTATCAAGTTGTGATAGATTCAATAAAGAAGTCTATAAAAAAAACCCTTCAGCTCTAGCAGTAGGTATTTCTGGATTTGCTTATGTAGTTTTAACATGGGCATACAAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGCTAAAAGAGTAAGCTATTTTGTGTTCAAGGGGTTGTTTGTTGATGAAGATGTCATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGATGAACAGAACGAGAGCTTAGATGACATGGTATACAACATAGCTCTACTAAAGGAAGCAGAAGAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTTAA

Protein sequence

MGKNRVSSCDRFNKEVYKKNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVSYFVFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI*

Homology

[Close]

BLAST of CsGy3G024697 vs. NCBI nr
Match: KAE8650805.1 (hypothetical protein Csa_017412 [Cucumis sativus])

HSP 1 Score: 426 bits (1096), Expect = 5.41e-150
Identity = 225/233 (96.57%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 1   MGKNRVSSCDRFNKEVYKKNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVSYF 60
           MGKNRVSSCDRFNKEVYKKNPSALAV        VLTWAYKCIPLLSGPSMFCAKRVSYF
Sbjct: 1   MGKNRVSSCDRFNKEVYKKNPSALAV--------VLTWAYKCIPLLSGPSMFCAKRVSYF 60

Query: 61  VFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLN 120
           VFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLN
Sbjct: 61  VFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLN 120

Query: 121 KKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENL 180
           KKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENL
Sbjct: 121 KKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENL 180

Query: 181 NIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI 233
           NIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI
Sbjct: 181 NIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI 225

[Close]

BLAST of CsGy3G024697 vs. NCBI nr
Match: KAE8653550.1 (hypothetical protein Csa_006898, partial [Cucumis sativus])

HSP 1 Score: 182 bits (463), Expect = 3.60e-55
Identity = 94/121 (77.69%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 80  TENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITN 139
           T  +NFEKGECSKESEGINTQIPEY+L FQ+IML NNE+LNKKLDKLIG+VEEIK K+TN
Sbjct: 4   TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63

Query: 140 RSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAA 199
           RSS  TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+N+DE+ +RTTI+NSENEAA
Sbjct: 64  RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNSENEAA 123

[Close]

BLAST of CsGy3G024697 vs. NCBI nr
Match: TYK22552.1 (uncharacterized protein E5676_scaffold584G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 1.64e-24
Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 0


Query: 31  FAYVVLTWAYKCIPLLSGPSMFCAKRVS----------------------------YFVF 90
           F +  + W Y+CIPLL  PS+FC ++V                              F +
Sbjct: 160 FPWGRIVWVYECIPLLIEPSIFCVQKVDDNKICILKWVVDSHPEWKELAEMVFDNYQFQY 219

Query: 91  KGLFVDEDVMEGSMFHDTENKN-----FEKGECSKESEGINTQIPEYFLKFQEIMLKNNE 150
           + +F   D +E SMFH+TE ++     FE+GECS++ E  N +I  YFLKFQE+++ NNE
Sbjct: 220 QVMF-QNDFVERSMFHETEMRDETHVTFERGECSRQPEPPNEKIAYYFLKFQELIMANNE 279

Query: 151 KLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNT 210
            LN+KLD LI + E +K    ++ +   E      +D++ DGG             +G+T
Sbjct: 280 CLNQKLDNLIKEAECLKNIFKDKVTEIVENNENIQKDDNNDGG-------------EGDT 339

Query: 211 ENLNIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMK 231
            N N+D + +R              QN+ LDD+VYN ALL E ++IEK+A+KMK
Sbjct: 340 NNENVDNEVDRDVTTQQGG------QNDLLDDVVYNTALLNEIDKIEKKAIKMK 373

[Close]

BLAST of CsGy3G024697 vs. NCBI nr
Match: KAA0051301.1 (uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (255), Expect = 8.02e-22
Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 19  KNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVS-------------------- 78
           KN +AL VGI+ FAY +L   Y+CIPLL+GPS+FCA++V                     
Sbjct: 147 KNLTALVVGIAEFAYSLLVRVYECIPLLTGPSIFCAQKVDDNKICMLNWVVDNHPEWKDL 206

Query: 79  --------YFVFKGLFVDEDVMEGSMFHDT-----ENKNFEKGECSKESEGINTQIPEYF 138
                    F F+ +F +ED +E  MFH+       N  F++GE S + E  N +IP+YF
Sbjct: 207 AEKVFDNDQFKFEVMF-EEDFVERMMFHENVMREETNGTFDRGESSWQGETSNEKIPDYF 266

Query: 139 LKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNG 162
           LKFQE++L NNE LN KLD LI +VE  K  +  + +   E  +   +D+D D G G
Sbjct: 267 LKFQELILANNECLNNKLDLLIKEVESFKDMLKEKVNQTVENNDNMPKDDDNDEGEG 322

[Close]

BLAST of CsGy3G024697 vs. NCBI nr
Match: KAA0038989.1 (uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 2.59e-20
Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 70  DVMEGSMFHDTENKN-----FEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLD 129
           D +E SMFH+TE ++     FE+GECS++ E  N +I  YFLKFQE+++ NNE LN+KLD
Sbjct: 98  DFVERSMFHETEMRDETHVTFERGECSRQPEPPNEKIAYYFLKFQELIMANNECLNQKLD 157

Query: 130 KLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDE 189
            LI +VE +K    ++ +   E      +D++ DGG             +G+T N N+D 
Sbjct: 158 NLIKEVECLKNIFKDKVTEIVENNENIQKDDNNDGG-------------EGDTNNENVDN 217

Query: 190 KWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI 233
           + +R              QN+ LDD+VYN ALL E ++IEK+A+KMK I
Sbjct: 218 EVDRDVTTQQGG------QNDLLDDVVYNTALLNEIDKIEKKAIKMKDI 247

[Close]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match: A0A0A0L8U3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 6.41e-81
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 72  MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 131
           MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE
Sbjct: 1   MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60

Query: 132 EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 191
           EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI
Sbjct: 61  EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120

Query: 192 INSENEAAR 200
           INSENEAAR
Sbjct: 121 INSENEAAR 129

[Close]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match: A0A0A0LXM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 3.38e-69
Identity = 118/152 (77.63%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 80  TENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITN 139
           T  +NFEKGECSKESEGINTQIPEY+L FQ+IML NNE+LNKKLDKLIG+VEEIK K+TN
Sbjct: 4   TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63

Query: 140 RSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAA 199
           RSS  TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+ +DE+ +RTTI+NSENEAA
Sbjct: 64  RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAA 123

Query: 200 RDEQNESLDDMVYNIALLKEAEEIEKEALKMK 231
           R   NESLDDMVYN ALLKE E+IEKEALKMK
Sbjct: 124 R---NESLDDMVYNTALLKEVEQIEKEALKMK 152

[Close]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match: A0A0A0K3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 2.83e-29
Identity = 77/154 (50.00%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 54  AKRV---SYFVFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQE 113
           A+RV   + FVFKGLF DEDVMEG+MFH TE KNFEKGE SKES  INTQI E       
Sbjct: 29  AERVFDTNQFVFKGLFPDEDVMEGNMFHGTETKNFEKGEYSKESARINTQIHE------- 88

Query: 114 IMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLAD 173
                                                      DEDRDGGNG+R+D L D
Sbjct: 89  -------------------------------------------DEDRDGGNGERDDGLVD 132

Query: 174 DGEDGNTENLNIDEKWERTTIINSENEAARDEQN 204
           DGED NTEN+N+DE+ ++TTI+NSENEAARD QN
Sbjct: 149 DGEDCNTENINMDEEGDKTTIVNSENEAARDGQN 132

[Close]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match: A0A5D3DG30 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold584G00070 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 7.96e-25
Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 0


Query: 31  FAYVVLTWAYKCIPLLSGPSMFCAKRVS----------------------------YFVF 90
           F +  + W Y+CIPLL  PS+FC ++V                              F +
Sbjct: 160 FPWGRIVWVYECIPLLIEPSIFCVQKVDDNKICILKWVVDSHPEWKELAEMVFDNYQFQY 219

Query: 91  KGLFVDEDVMEGSMFHDTENKN-----FEKGECSKESEGINTQIPEYFLKFQEIMLKNNE 150
           + +F   D +E SMFH+TE ++     FE+GECS++ E  N +I  YFLKFQE+++ NNE
Sbjct: 220 QVMF-QNDFVERSMFHETEMRDETHVTFERGECSRQPEPPNEKIAYYFLKFQELIMANNE 279

Query: 151 KLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNT 210
            LN+KLD LI + E +K    ++ +   E      +D++ DGG             +G+T
Sbjct: 280 CLNQKLDNLIKEAECLKNIFKDKVTEIVENNENIQKDDNNDGG-------------EGDT 339

Query: 211 ENLNIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMK 231
            N N+D + +R              QN+ LDD+VYN ALL E ++IEK+A+KMK
Sbjct: 340 NNENVDNEVDRDVTTQQGG------QNDLLDDVVYNTALLNEIDKIEKKAIKMK 373

[Close]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match: A0A5A7UCM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00080 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 3.88e-22
Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 19  KNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVS-------------------- 78
           KN +AL VGI+ FAY +L   Y+CIPLL+GPS+FCA++V                     
Sbjct: 147 KNLTALVVGIAEFAYSLLVRVYECIPLLTGPSIFCAQKVDDNKICMLNWVVDNHPEWKDL 206

Query: 79  --------YFVFKGLFVDEDVMEGSMFHDT-----ENKNFEKGECSKESEGINTQIPEYF 138
                    F F+ +F +ED +E  MFH+       N  F++GE S + E  N +IP+YF
Sbjct: 207 AEKVFDNDQFKFEVMF-EEDFVERMMFHENVMREETNGTFDRGESSWQGETSNEKIPDYF 266

Query: 139 LKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNG 162
           LKFQE++L NNE LN KLD LI +VE  K  +  + +   E  +   +D+D D G G
Sbjct: 267 LKFQELILANNECLNNKLDLLIKEVESFKDMLKEKVNQTVENNDNMPKDDDNDEGEG 322

The following BLAST results are available for this feature:

BLAST of CsGy3G024697 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G024697 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650805.1	5.41e-150	96.57	hypothetical protein Csa_017412 [Cucumis sativus]	[more]
KAE8653550.1	3.60e-55	77.69	hypothetical protein Csa_006898, partial [Cucumis sativus]	[more]
TYK22552.1	1.64e-24	34.62	uncharacterized protein E5676_scaffold584G00070 [Cucumis melo var. makuwa]	[more]
KAA0051301.1	8.02e-22	38.98	uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa]	[more]
KAA0038989.1	2.59e-20	40.24	uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8U3	6.41e-81	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1	[more]
A0A0A0LXM6	3.38e-69	77.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1	[more]
A0A0A0K3Z3	2.83e-29	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1	[more]
A0A5D3DG30	7.96e-25	34.62	DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UCM5	3.88e-22	38.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CsGy3G024697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G024697.1	CsGy3G024697.1	mRNA