Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAATAGGGTATCAAGTTGTGATAGATTCAATAAAGAAGTCTATAAAAAAAACCCTTCAGCTCTAGCAGTAGGTATTTCTGGATTTGCTTATGTAGTTTTAACATGGGCATACAAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGCTAAAAGAGTAAGCTATGTAAATCGAAATATATTCAAATGTATTATGTATATATATAAAATGCCCAAATATACTTATCTTCGATACTTTTCAAATTTCAGTTTGTGTTCAAGGGGTTGTTTGTTGATGAAGATGTCATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGTATGATATTATTACTAGTATATGTATTTTTTCTTTATTAGTGAAACACGTATGTAAATTATATATTTAGTAATTTGCATATATTCTTGACTGACAGGATGAACAGAACGAGAGCTTAGATGACATGGTATACAACATAGCTCTACTAAAGGAAGCAGAAGAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTTAA
mRNA sequence
ATGGGGAAGAATAGGGTATCAAGTTGTGATAGATTCAATAAAGAAGTCTATAAAAAAAACCCTTCAGCTCTAGCAGTAGGTATTTCTGGATTTGCTTATGTAGTTTTAACATGGGCATACAAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGCTAAAAGAGTAAGCTATTTTGTGTTCAAGGGGTTGTTTGTTGATGAAGATGTCATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGATGAACAGAACGAGAGCTTAGATGACATGGTATACAACATAGCTCTACTAAAGGAAGCAGAAGAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTTAA
Coding sequence (CDS)
ATGGGGAAGAATAGGGTATCAAGTTGTGATAGATTCAATAAAGAAGTCTATAAAAAAAACCCTTCAGCTCTAGCAGTAGGTATTTCTGGATTTGCTTATGTAGTTTTAACATGGGCATACAAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGCTAAAAGAGTAAGCTATTTTGTGTTCAAGGGGTTGTTTGTTGATGAAGATGTCATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGATGAACAGAACGAGAGCTTAGATGACATGGTATACAACATAGCTCTACTAAAGGAAGCAGAAGAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTTAA
Protein sequence
MGKNRVSSCDRFNKEVYKKNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVSYFVFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI*
Homology
BLAST of CsGy3G024697 vs. NCBI nr
Match:
KAE8650805.1 (hypothetical protein Csa_017412 [Cucumis sativus])
HSP 1 Score: 426 bits (1096), Expect = 5.41e-150
Identity = 225/233 (96.57%), Postives = 225/233 (96.57%), Query Frame = 0
Query: 1 MGKNRVSSCDRFNKEVYKKNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVSYF 60
MGKNRVSSCDRFNKEVYKKNPSALAV VLTWAYKCIPLLSGPSMFCAKRVSYF
Sbjct: 1 MGKNRVSSCDRFNKEVYKKNPSALAV--------VLTWAYKCIPLLSGPSMFCAKRVSYF 60
Query: 61 VFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLN 120
VFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLN
Sbjct: 61 VFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLN 120
Query: 121 KKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENL 180
KKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENL
Sbjct: 121 KKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENL 180
Query: 181 NIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI 233
NIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI
Sbjct: 181 NIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI 225
BLAST of CsGy3G024697 vs. NCBI nr
Match:
KAE8653550.1 (hypothetical protein Csa_006898, partial [Cucumis sativus])
HSP 1 Score: 182 bits (463), Expect = 3.60e-55
Identity = 94/121 (77.69%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 80 TENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITN 139
T +NFEKGECSKESEGINTQIPEY+L FQ+IML NNE+LNKKLDKLIG+VEEIK K+TN
Sbjct: 4 TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63
Query: 140 RSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAA 199
RSS TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+N+DE+ +RTTI+NSENEAA
Sbjct: 64 RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNSENEAA 123
BLAST of CsGy3G024697 vs. NCBI nr
Match:
TYK22552.1 (uncharacterized protein E5676_scaffold584G00070 [Cucumis melo var. makuwa])
HSP 1 Score: 111 bits (277), Expect = 1.64e-24
Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 0
Query: 31 FAYVVLTWAYKCIPLLSGPSMFCAKRVS----------------------------YFVF 90
F + + W Y+CIPLL PS+FC ++V F +
Sbjct: 160 FPWGRIVWVYECIPLLIEPSIFCVQKVDDNKICILKWVVDSHPEWKELAEMVFDNYQFQY 219
Query: 91 KGLFVDEDVMEGSMFHDTENKN-----FEKGECSKESEGINTQIPEYFLKFQEIMLKNNE 150
+ +F D +E SMFH+TE ++ FE+GECS++ E N +I YFLKFQE+++ NNE
Sbjct: 220 QVMF-QNDFVERSMFHETEMRDETHVTFERGECSRQPEPPNEKIAYYFLKFQELIMANNE 279
Query: 151 KLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNT 210
LN+KLD LI + E +K ++ + E +D++ DGG +G+T
Sbjct: 280 CLNQKLDNLIKEAECLKNIFKDKVTEIVENNENIQKDDNNDGG-------------EGDT 339
Query: 211 ENLNIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMK 231
N N+D + +R QN+ LDD+VYN ALL E ++IEK+A+KMK
Sbjct: 340 NNENVDNEVDRDVTTQQGG------QNDLLDDVVYNTALLNEIDKIEKKAIKMK 373
BLAST of CsGy3G024697 vs. NCBI nr
Match:
KAA0051301.1 (uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 102 bits (255), Expect = 8.02e-22
Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 0
Query: 19 KNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVS-------------------- 78
KN +AL VGI+ FAY +L Y+CIPLL+GPS+FCA++V
Sbjct: 147 KNLTALVVGIAEFAYSLLVRVYECIPLLTGPSIFCAQKVDDNKICMLNWVVDNHPEWKDL 206
Query: 79 --------YFVFKGLFVDEDVMEGSMFHDT-----ENKNFEKGECSKESEGINTQIPEYF 138
F F+ +F +ED +E MFH+ N F++GE S + E N +IP+YF
Sbjct: 207 AEKVFDNDQFKFEVMF-EEDFVERMMFHENVMREETNGTFDRGESSWQGETSNEKIPDYF 266
Query: 139 LKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNG 162
LKFQE++L NNE LN KLD LI +VE K + + + E + +D+D D G G
Sbjct: 267 LKFQELILANNECLNNKLDLLIKEVESFKDMLKEKVNQTVENNDNMPKDDDNDEGEG 322
BLAST of CsGy3G024697 vs. NCBI nr
Match:
KAA0038989.1 (uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa])
HSP 1 Score: 97.8 bits (242), Expect = 2.59e-20
Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 0
Query: 70 DVMEGSMFHDTENKN-----FEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLD 129
D +E SMFH+TE ++ FE+GECS++ E N +I YFLKFQE+++ NNE LN+KLD
Sbjct: 98 DFVERSMFHETEMRDETHVTFERGECSRQPEPPNEKIAYYFLKFQELIMANNECLNQKLD 157
Query: 130 KLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDE 189
LI +VE +K ++ + E +D++ DGG +G+T N N+D
Sbjct: 158 NLIKEVECLKNIFKDKVTEIVENNENIQKDDNNDGG-------------EGDTNNENVDN 217
Query: 190 KWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMKVI 233
+ +R QN+ LDD+VYN ALL E ++IEK+A+KMK I
Sbjct: 218 EVDRDVTTQQGG------QNDLLDDVVYNTALLNEIDKIEKKAIKMKDI 247
BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match:
A0A0A0L8U3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1)
HSP 1 Score: 247 bits (631), Expect = 6.41e-81
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 72 MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 131
MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE
Sbjct: 1 MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60
Query: 132 EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 191
EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI
Sbjct: 61 EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120
Query: 192 INSENEAAR 200
INSENEAAR
Sbjct: 121 INSENEAAR 129
BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match:
A0A0A0LXM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1)
HSP 1 Score: 219 bits (559), Expect = 3.38e-69
Identity = 118/152 (77.63%), Postives = 136/152 (89.47%), Query Frame = 0
Query: 80 TENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITN 139
T +NFEKGECSKESEGINTQIPEY+L FQ+IML NNE+LNKKLDKLIG+VEEIK K+TN
Sbjct: 4 TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63
Query: 140 RSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAA 199
RSS TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+ +DE+ +RTTI+NSENEAA
Sbjct: 64 RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAA 123
Query: 200 RDEQNESLDDMVYNIALLKEAEEIEKEALKMK 231
R NESLDDMVYN ALLKE E+IEKEALKMK
Sbjct: 124 R---NESLDDMVYNTALLKEVEQIEKEALKMK 152
BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match:
A0A0A0K3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1)
HSP 1 Score: 116 bits (290), Expect = 2.83e-29
Identity = 77/154 (50.00%), Postives = 88/154 (57.14%), Query Frame = 0
Query: 54 AKRV---SYFVFKGLFVDEDVMEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQE 113
A+RV + FVFKGLF DEDVMEG+MFH TE KNFEKGE SKES INTQI E
Sbjct: 29 AERVFDTNQFVFKGLFPDEDVMEGNMFHGTETKNFEKGEYSKESARINTQIHE------- 88
Query: 114 IMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLAD 173
DEDRDGGNG+R+D L D
Sbjct: 89 -------------------------------------------DEDRDGGNGERDDGLVD 132
Query: 174 DGEDGNTENLNIDEKWERTTIINSENEAARDEQN 204
DGED NTEN+N+DE+ ++TTI+NSENEAARD QN
Sbjct: 149 DGEDCNTENINMDEEGDKTTIVNSENEAARDGQN 132
BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match:
A0A5D3DG30 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold584G00070 PE=4 SV=1)
HSP 1 Score: 111 bits (277), Expect = 7.96e-25
Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 0
Query: 31 FAYVVLTWAYKCIPLLSGPSMFCAKRVS----------------------------YFVF 90
F + + W Y+CIPLL PS+FC ++V F +
Sbjct: 160 FPWGRIVWVYECIPLLIEPSIFCVQKVDDNKICILKWVVDSHPEWKELAEMVFDNYQFQY 219
Query: 91 KGLFVDEDVMEGSMFHDTENKN-----FEKGECSKESEGINTQIPEYFLKFQEIMLKNNE 150
+ +F D +E SMFH+TE ++ FE+GECS++ E N +I YFLKFQE+++ NNE
Sbjct: 220 QVMF-QNDFVERSMFHETEMRDETHVTFERGECSRQPEPPNEKIAYYFLKFQELIMANNE 279
Query: 151 KLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNT 210
LN+KLD LI + E +K ++ + E +D++ DGG +G+T
Sbjct: 280 CLNQKLDNLIKEAECLKNIFKDKVTEIVENNENIQKDDNNDGG-------------EGDT 339
Query: 211 ENLNIDEKWERTTIINSENEAARDEQNESLDDMVYNIALLKEAEEIEKEALKMK 231
N N+D + +R QN+ LDD+VYN ALL E ++IEK+A+KMK
Sbjct: 340 NNENVDNEVDRDVTTQQGG------QNDLLDDVVYNTALLNEIDKIEKKAIKMK 373
BLAST of CsGy3G024697 vs. ExPASy TrEMBL
Match:
A0A5A7UCM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00080 PE=4 SV=1)
HSP 1 Score: 102 bits (255), Expect = 3.88e-22
Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 0
Query: 19 KNPSALAVGISGFAYVVLTWAYKCIPLLSGPSMFCAKRVS-------------------- 78
KN +AL VGI+ FAY +L Y+CIPLL+GPS+FCA++V
Sbjct: 147 KNLTALVVGIAEFAYSLLVRVYECIPLLTGPSIFCAQKVDDNKICMLNWVVDNHPEWKDL 206
Query: 79 --------YFVFKGLFVDEDVMEGSMFHDT-----ENKNFEKGECSKESEGINTQIPEYF 138
F F+ +F +ED +E MFH+ N F++GE S + E N +IP+YF
Sbjct: 207 AEKVFDNDQFKFEVMF-EEDFVERMMFHENVMREETNGTFDRGESSWQGETSNEKIPDYF 266
Query: 139 LKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNG 162
LKFQE++L NNE LN KLD LI +VE K + + + E + +D+D D G G
Sbjct: 267 LKFQELILANNECLNNKLDLLIKEVESFKDMLKEKVNQTVENNDNMPKDDDNDEGEG 322
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAE8650805.1 | 5.41e-150 | 96.57 | hypothetical protein Csa_017412 [Cucumis sativus] | [more] |
KAE8653550.1 | 3.60e-55 | 77.69 | hypothetical protein Csa_006898, partial [Cucumis sativus] | [more] |
TYK22552.1 | 1.64e-24 | 34.62 | uncharacterized protein E5676_scaffold584G00070 [Cucumis melo var. makuwa] | [more] |
KAA0051301.1 | 8.02e-22 | 38.98 | uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa] | [more] |
KAA0038989.1 | 2.59e-20 | 40.24 | uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L8U3 | 6.41e-81 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1 | [more] |
A0A0A0LXM6 | 3.38e-69 | 77.63 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1 | [more] |
A0A0A0K3Z3 | 2.83e-29 | 50.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1 | [more] |
A0A5D3DG30 | 7.96e-25 | 34.62 | DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7UCM5 | 3.88e-22 | 38.98 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |