CsGy3G024080 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G024080
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ribulose-phosphate 3-epimerase
Location	Gy14Chr3: 24093719 .. 24096064 (-)
RNA-Seq Expression	CsGy3G024080
Synteny	CsGy3G024080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTGTGCTTCAATCCACAGAAATCCCGATTCCGCCATGAAATTCAAACTCTCACTTGCTTCCAAAACCACCGATATGGAAATTCCCCCTTCACCCATCAAACAAAACAACACTCCCATCAACCCCACCGTCTTTCTCAAATCTCAGACCTCCCCTTCTCACTTGGGTACTTCTACTTTTCTTCTTTTTCAGTTTCTACTACTGTAATCGCCTGTGTTTTCTTCTTTTTGCTTCCTTTCTTTTAATGATTCCTTGTTGATTTGTATTTTTGTTGTGTCATGAACTTTGATGCTTCACAATCTCTGCCTCTTTAGTCTTTACCCCACTCATCTCAGAAACAAAATTATATGCGATCTAAAGTGTTTTTTGCTTCTCGCGTTATCCCTGATTTGACTTTAATTGCTTTGTCATGATCTAAACCTGTTTTGTTTTTCTAATTGAATATTTTATTGAATTATTGCCTTTTGGACATATATTGATGAATATGTATGATAAAGTTAATCTAGGCCCCATTTGTTTATATTATTATTAAAAAAGCTGAGGAACCCATCTTTTTTTCAATCTAAATCTCCATAGATTGATGAAGAGAAGGGCTTTAATTTTCACCTTGTTCTTTTTCTTCTTAATAATTATTCATTAAAATTAGAGACCCCAGTTTTCTTTTCTTATGGTTTGATGATAAAATTTTGAGATGGAATTGACTCTTCTGTGTATGATGGAGATTCTCCTTCCTTTCTCCACTGAAAGCTCTGTTTCCAATTAAGCTATGCTATGTATTGTTATTAGTGGATTTTGTGCCTAGTTATTAATTGGCATATTAAAAGATCTAAGAGAAAAATAAGTGTACTAAAGATTTGTTTCAAAAGTTTACCGAGTTTCAATCATATTGTATTGATCACACCTAGTAATTTGTAAAATAACTTTTTGTTTATTAGTTGATTACCTTTTTAACTTTAAAATAAAAATAAGCGGTTTGTTTGTTTGTTTCTTTTGATTTGTGTTTCTTATAATTTGTTGCATAGTGATGCCAGATTTTATCTGCCCCTCTTTTGTTAAGGGTATTGTGATGAGTTTCTCTCCATCTCACATTAAGGATAGTGAGCAATGCTTGCTTTTCAGGATTCAAGAATTCTCATGTATTAAGCTTGAACTTGGGAACTCGAAGAACTTCTCTCGCACGTCTTAAGTTATTACCAACAGGACTGCCTTTTTGGGCAAATTTATTACTATTCCTAGTTTAATTTATCCTTGCCTATTTGGTTTTTGGGGCAATGGAATCAATTGCCTTGTTTAGTCATTATCAGAGAACGGAGAAAATGATGGATGGAAGTAAGACTTCTATTCCTAGAATTGCATAGCAGAAGCAGTTTCTGGTCTTCTCGTTAATAAAGAAGTTTTGTCTCCGTTTCAAAAAAAAGAGCAGTTTCTGGTCTAGGATTTCTTTCACAAATCACAAGGATGCTGTAACTCAGTTCCATTGAGATCTTCAAATGTTTATTCACTCGTCCTTCCTATGTTTGGGGTTCCAAATTTTTATTGTTTTGATGTGGTGGCCCAAACTCATTATGATCAAAGGTTACTGTTAGAAATCTTTCTACCTATTTGTCACTGTGCGTTTTTTCTTTTATATACTCTATTGATTATGTTTTTCACACTAGTCTTGTGTTTTATATGCATTTATTTTATTAATTTTTCCTTTTGCTCTCTATCACACCTATTTTTGTATCAACTCTGAAATGTTGACATTTGAGTTTTGGTGTTCTCTCATAGGTAGCAAAGATGAAGCGTTTTTTGATTCACGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTACAGTGTTAATGGTGGTAAGTAGACATTGGAATTCTTTTTAATGCTGTTTGCCTCCTTCATCTCCTTTCTTAGAGTATTCAATTGTAATGGCTGTAGATTTCACTCCTTCGCGAGGAAATACTCCCGTACACTCCAGCTTCTCCTCTGGTACTCCTCGGATCAACCAAGTTCATGGCATTGATGATCAAACTCCAATCACCATTCCGGAACCATCGCCAACCGGAAAGAAGAGGCTGGCTGAACTTTTCAGGGAGAGCTCTAGAAATGGCACAGACAGACAAGCCAAACCGACCCTAAATGAACTCGCCTTGCAGTCGAATCCTGAAACGCCTTACATTTCAGGAACAAACTCTGTATGCAGCAGTGAGAGGACCCCAAATGGAGATGTCTGGGGTGAGAAGGAAAGGCCATTTGGATCTGTACAATGCTGCCTCCCAAGCTTGGGATCATGTCATAGCTTTGGTGACCGGAGGAAGAAGGCAAGCCCTGCCATAGCTGTGTAG

mRNA sequence

ATGGGTTCCTGTGCTTCAATCCACAGAAATCCCGATTCCGCCATGAAATTCAAACTCTCACTTGCTTCCAAAACCACCGATATGGAAATTCCCCCTTCACCCATCAAACAAAACAACACTCCCATCAACCCCACCGTCTTTCTCAAATCTCAGACCTCCCCTTCTCACTTGGGTAGCAAAGATGAAGCGTTTTTTGATTCACGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTACAGTGTTAATGGTGATTTCACTCCTTCGCGAGGAAATACTCCCGTACACTCCAGCTTCTCCTCTGGTACTCCTCGGATCAACCAAGTTCATGGCATTGATGATCAAACTCCAATCACCATTCCGGAACCATCGCCAACCGGAAAGAAGAGGCTGGCTGAACTTTTCAGGGAGAGCTCTAGAAATGGCACAGACAGACAAGCCAAACCGACCCTAAATGAACTCGCCTTGCAGTCGAATCCTGAAACGCCTTACATTTCAGGAACAAACTCTGTATGCAGCAGTGAGAGGACCCCAAATGGAGATGTCTGGGGTGAGAAGGAAAGGCCATTTGGATCTGTACAATGCTGCCTCCCAAGCTTGGGATCATGTCATAGCTTTGGTGACCGGAGGAAGAAGGCAAGCCCTGCCATAGCTGTGTAG

Coding sequence (CDS)

ATGGGTTCCTGTGCTTCAATCCACAGAAATCCCGATTCCGCCATGAAATTCAAACTCTCACTTGCTTCCAAAACCACCGATATGGAAATTCCCCCTTCACCCATCAAACAAAACAACACTCCCATCAACCCCACCGTCTTTCTCAAATCTCAGACCTCCCCTTCTCACTTGGGTAGCAAAGATGAAGCGTTTTTTGATTCACGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTACAGTGTTAATGGTGATTTCACTCCTTCGCGAGGAAATACTCCCGTACACTCCAGCTTCTCCTCTGGTACTCCTCGGATCAACCAAGTTCATGGCATTGATGATCAAACTCCAATCACCATTCCGGAACCATCGCCAACCGGAAAGAAGAGGCTGGCTGAACTTTTCAGGGAGAGCTCTAGAAATGGCACAGACAGACAAGCCAAACCGACCCTAAATGAACTCGCCTTGCAGTCGAATCCTGAAACGCCTTACATTTCAGGAACAAACTCTGTATGCAGCAGTGAGAGGACCCCAAATGGAGATGTCTGGGGTGAGAAGGAAAGGCCATTTGGATCTGTACAATGCTGCCTCCCAAGCTTGGGATCATGTCATAGCTTTGGTGACCGGAGGAAGAAGGCAAGCCCTGCCATAGCTGTGTAG

Protein sequence

MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV*

Homology

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BLAST of CsGy3G024080 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.7e-22
Identity = 80/192 (41.67%), Postives = 96/192 (50.00%), Query Frame = 0


Query: 34  PIKQNNTPINPTVFLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNT 93
           P   N TP+       S  S    GSKDE FFDS+ WL SD +DDF+SVNGDFTPS GNT
Sbjct: 57  PANNNLTPVKSRWSFSS--SKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNT 116

Query: 94  PVHSSFSSGTPRINQV--HGIDDQTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTL 153
           P  SSFS   PR + +  H        + P P P  +K+L ELFR+S R   +       
Sbjct: 117 P-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPR-RKKLGELFRDSIREERE------- 176

Query: 154 NELALQSNPETPYISGTNSVCSSERTPNGDVWGEKERPFGSVQCCLPSLGSC-HSFGDRR 213
            E    S   TPY+SG N   S E         EK++       CLP   SC  SF +RR
Sbjct: 177 -ESGSSSAISTPYLSGAN---SREFNDTAIEKEEKKKSNWHHHRCLPGFSSCGGSFMERR 233

Query: 214 KKAS---PAIAV 220
           KK S   P +AV
Sbjct: 237 KKMSSETPVVAV 233

[Close]

BLAST of CsGy3G024080 vs. NCBI nr
Match: XP_011651566.1 (uncharacterized protein At3g27210 isoform X1 [Cucumis sativus])

HSP 1 Score: 455 bits (1171), Expect = 9.05e-162
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60
           MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60

Query: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120
           DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI
Sbjct: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120

Query: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180
           PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG
Sbjct: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180

Query: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV
Sbjct: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of CsGy3G024080 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo])

HSP 1 Score: 439 bits (1128), Expect = 3.27e-155
Identity = 210/219 (95.89%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60
           MGSCASIHRNPDSAMKFKLSLASKT DM IPPSPIKQNNTPINPTVF KSQTSPSHLGSK
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPINPTVFHKSQTSPSHLGSK 60

Query: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120
           DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP HSSFSSGTPRINQVHGIDDQTPITI
Sbjct: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTPITI 120

Query: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180
           PEPSPTGKK+LA+LFRESSRNGTDRQAKPTLNELALQSNPETPY+SGTNSVCSSERTPNG
Sbjct: 121 PEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERTPNG 180

Query: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           DVW EKERPFGSVQCCLPSL SCHSFGDRRKKASPAIAV
Sbjct: 181 DVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of CsGy3G024080 vs. NCBI nr
Match: XP_038901054.1 (uncharacterized protein At3g27210-like [Benincasa hispida])

HSP 1 Score: 410 bits (1053), Expect = 8.89e-144
Identity = 198/219 (90.41%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60
           MGSCASIHRN DSAMKF+LSLASKT DM IPPSPIK NNTPIN ++F KSQTSPSHLGSK
Sbjct: 1   MGSCASIHRNSDSAMKFRLSLASKTNDMPIPPSPIKDNNTPINASLFPKSQTSPSHLGSK 60

Query: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120
           DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFS GTPRINQVH +DD+TPI I
Sbjct: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSFGTPRINQVHVVDDRTPIAI 120

Query: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180
           PEPSPTGKK+LA+LFRESSRNGTD QAKPTLNELALQSNPETPY+SGTNSVCSSERTPNG
Sbjct: 121 PEPSPTGKKKLADLFRESSRNGTDIQAKPTLNELALQSNPETPYMSGTNSVCSSERTPNG 180

Query: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           DV  EKERPFGSVQCCLPSLGSC SFGDRRKKASPAIAV
Sbjct: 181 DVLSEKERPFGSVQCCLPSLGSCRSFGDRRKKASPAIAV 219

[Close]

BLAST of CsGy3G024080 vs. NCBI nr
Match: KAG6581091.1 (hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364 bits (934), Expect = 1.50e-125
Identity = 180/225 (80.00%), Postives = 195/225 (86.67%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPR+NQVH +DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120

Query: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           ERT NGDVW EKER FGS QCCLPSLGS  SF DRRKKASPAIAV
Sbjct: 181 ERTSNGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 225

[Close]

BLAST of CsGy3G024080 vs. NCBI nr
Match: XP_023529186.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (932), Expect = 3.14e-125
Identity = 182/226 (80.53%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120
           SH GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPRINQVH +DD
Sbjct: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120

Query: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPNG-DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           ERT NG DVW EKE+ FGS QCCLPSLGS  SFGDRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

[Close]

BLAST of CsGy3G024080 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 4.38e-162
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60
           MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60

Query: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120
           DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI
Sbjct: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120

Query: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180
           PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG
Sbjct: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180

Query: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV
Sbjct: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of CsGy3G024080 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 1.58e-155
Identity = 210/219 (95.89%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60
           MGSCASIHRNPDSAMKFKLSLASKT DM IPPSPIKQNNTPINPTVF KSQTSPSHLGSK
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPINPTVFHKSQTSPSHLGSK 60

Query: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITI 120
           DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP HSSFSSGTPRINQVHGIDDQTPITI
Sbjct: 61  DEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTPITI 120

Query: 121 PEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 180
           PEPSPTGKK+LA+LFRESSRNGTDRQAKPTLNELALQSNPETPY+SGTNSVCSSERTPNG
Sbjct: 121 PEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERTPNG 180

Query: 181 DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           DVW EKERPFGSVQCCLPSL SCHSFGDRRKKASPAIAV
Sbjct: 181 DVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of CsGy3G024080 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1)

HSP 1 Score: 358 bits (919), Expect = 1.45e-123
Identity = 179/226 (79.20%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120
           SH GSKD+AFFDSRGWLDSDCEDDFYSVNGDFTPS+GNTPV +SFSSGTPRINQVH ++D
Sbjct: 61  SHFGSKDDAFFDSRGWLDSDCEDDFYSVNGDFTPSQGNTPVRTSFSSGTPRINQVHVVND 120

Query: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGT+ Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTEIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPNG-DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           ERT NG DVW EKER FGS QCCLPSLGS  SFGDRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

[Close]

BLAST of CsGy3G024080 vs. ExPASy TrEMBL
Match: A0A6J1F463 (uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 2.06e-123
Identity = 179/226 (79.20%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPR+NQVH +DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVLDD 120

Query: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIVMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPNG-DVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
           ERT NG DVW EKE+ FGS QCCLPSLGS  SF DRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 226

[Close]

BLAST of CsGy3G024080 vs. ExPASy TrEMBL
Match: A0A6J1EK04 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111435186 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.58e-122
Identity = 178/234 (76.07%), Postives = 191/234 (81.62%), Query Frame = 0


Query: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPT--------------V 60
           MGSC SIHRN DSA+KF+LS+ SKT +M IPPSPIK NN  I+                V
Sbjct: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAGGAGGVDGEGGVGGV 60

Query: 61  FLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRI 120
           F+KSQ SPS LGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SFSSGTPRI
Sbjct: 61  FVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSGTPRI 120

Query: 121 NQVHGIDDQTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYIS 180
           NQVH ID+QTPI +PEPSPTGKK+LAELFR+SSR  +D QAKPTLNELALQSNPE P++S
Sbjct: 121 NQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKPHVS 180

Query: 181 GTNSVCSS-ERTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219
            TNSVCSS ERT NGDVW EKERP GS QCCLPSLG C SFGDRRKKA PAI V
Sbjct: 181 RTNSVCSSSERTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKARPAIVV 234

[Close]

BLAST of CsGy3G024080 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 5.4e-23
Identity = 80/192 (41.67%), Postives = 96/192 (50.00%), Query Frame = 0


Query: 34  PIKQNNTPINPTVFLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNT 93
           P   N TP+       S  S    GSKDE FFDS+ WL SD +DDF+SVNGDFTPS GNT
Sbjct: 57  PANNNLTPVKSRWSFSS--SKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNT 116

Query: 94  PVHSSFSSGTPRINQV--HGIDDQTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTL 153
           P  SSFS   PR + +  H        + P P P  +K+L ELFR+S R   +       
Sbjct: 117 P-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPR-RKKLGELFRDSIREERE------- 176

Query: 154 NELALQSNPETPYISGTNSVCSSERTPNGDVWGEKERPFGSVQCCLPSLGSC-HSFGDRR 213
            E    S   TPY+SG N   S E         EK++       CLP   SC  SF +RR
Sbjct: 177 -ESGSSSAISTPYLSGAN---SREFNDTAIEKEEKKKSNWHHHRCLPGFSSCGGSFMERR 233

Query: 214 KKAS---PAIAV 220
           KK S   P +AV
Sbjct: 237 KKMSSETPVVAV 233

[Close]

BLAST of CsGy3G024080 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19
Identity = 80/224 (35.71%), Postives = 111/224 (49.55%), Query Frame = 0


Query: 1   MGSCASIHRN-PDSAMKFKLSLASKTTDMEIPPSPIKQN----NTPINPTVFLKSQTSPS 60
           MGSC S  ++   SA    + LAS  +  +  P P+K +    ++ IN    + S    S
Sbjct: 1   MGSCVSSSQSKSSSASDSVVKLASFISKPDSTP-PLKTDVMITSSTINGNPPIDSGRWDS 60

Query: 61  HLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQ--VHGID 120
               +D  FFDSRGWLDSDC+DDF SV G+FTPSRG TPVH  F   TP   +   HG +
Sbjct: 61  G-NKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGEENKHGEE 120

Query: 121 DQTPITIPEPSPT-GKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVC 180
           ++      E SPT  KKRL ELF+E+     + +      +   +          T    
Sbjct: 121 EE------EASPTDNKKRLLELFKETQDEEDEEE-----EDYVAEGKARACLWIRTPVRS 180

Query: 181 SSERTPNGDVWGEKERPFGSVQC-----CLPSLGSCHSFGDRRK 212
           S+  TP  +   E+++ F  V+      C+P L SC SF DRR+
Sbjct: 181 SAPATPYNNN-KERQQKFKRVRSAALGRCVPRLVSCSSFTDRRR 210

[Close]

BLAST of CsGy3G024080 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-19
Identity = 62/156 (39.74%), Postives = 82/156 (52.56%), Query Frame = 0


Query: 64  FFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQ--VHGIDDQTPITIP 123
           FFDSRGWLDSDC+DDF SV G+FTPSRG TPVH  F   TP   +   HG +++      
Sbjct: 3   FFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGEENKHGEEEE------ 62

Query: 124 EPSPT-GKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNG 183
           E SPT  KKRL ELF+E+     + +      +   +          T    S+  TP  
Sbjct: 63  EASPTDNKKRLLELFKETQDEEDEEE-----EDYVAEGKARACLWIRTPVRSSAPATPYN 122

Query: 184 DVWGEKERPFGSVQC-----CLPSLGSCHSFGDRRK 212
           +   E+++ F  V+      C+P L SC SF DRR+
Sbjct: 123 NN-KERQQKFKRVRSAALGRCVPRLVSCSSFTDRRR 146

[Close]

BLAST of CsGy3G024080 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-14
Identity = 69/212 (32.55%), Postives = 91/212 (42.92%), Query Frame = 0


Query: 29  EIPPSPIKQNNTPINPTVFLK-------------SQTSPSHLGSKDEAFFDSRGWLDSDC 88
           +I  SP+K+N  P+     +              S +  S   SKDE +FDS  W  SD 
Sbjct: 46  KISESPVKENLAPVATPKTVDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQQSDS 105

Query: 89  EDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPITIPEPSPTGKKRLAELF 148
           EDDFYSV GDFTPS GNTP   S S   PRI+      ++  ++        +K+L ELF
Sbjct: 106 EDDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKLGELF 165

Query: 149 RESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGDVWGE--KER----- 208
           R+S R            E A+     + Y S  +   S + +    V  E  KE+     
Sbjct: 166 RDSIR-----------EERAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNLKS 225

Query: 209 PFGSVQCCLPSLGSCH-SFGDRRKKASPAIAV 220
           P      CLP   S   S  D+RKK    I V
Sbjct: 226 PLNYHHRCLPRFSSFKGSLMDKRKKKKKKIHV 245

The following BLAST results are available for this feature:

BLAST of CsGy3G024080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK32	7.7e-22	41.67	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV...	[more]

BLAST of CsGy3G024080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651566.1	9.05e-162	100.00	uncharacterized protein At3g27210 isoform X1 [Cucumis sativus]	[more]
XP_008450086.1	3.27e-155	95.89	PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo]	[more]
XP_038901054.1	8.89e-144	90.41	uncharacterized protein At3g27210-like [Benincasa hispida]	[more]
KAG6581091.1	1.50e-125	80.00	hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023529186.1	3.14e-125	80.53	uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G024080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB55	4.38e-162	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1	[more]
A0A1S3BP47	1.58e-155	95.89	uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 P...	[more]
A0A6J1J5K2	1.45e-123	79.20	uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC1114814...	[more]
A0A6J1F463	2.06e-123	79.20	uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 ...	[more]
A0A6J1EK04	1.58e-122	76.07	uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CsGy3G024080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27210.1	5.4e-23	41.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G01860.1	1.6e-19	35.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G01860.2	4.8e-19	39.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G40860.1	3.5e-14	32.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..104
None	No IPR available	PANTHER	PTHR34280:SF2	OS01G0920100 PROTEIN	coord: 1..216
IPR038947	At3g27210-like	PANTHER	PTHR34280	OS01G0920100 PROTEIN	coord: 1..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G024080.2	CsGy3G024080.2	mRNA