
CsGy3G023960 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACTATTGGAGGACAATTTGGTGATGGCGTTTCTTTAAAAACCCAAAAGATCCTTCCTCTTTACTCCTCTGTCTCCCCTGTCGCTCGGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGTAACTCTTCAAATCCATACAACTCTCGCTTTTCTTTTCCTACCTTCTTCCCTTATCTCTTCCTACTCGTTGATTTCCCCTTAACTCTTTTAACTCCACTTTTGCTAATTTCGCATTCAATCATCTCTTTAATTGTCTTTTCCCAATCTCGTTTTTTTTCTTCTGGGTCTTGTTTCTTTGTTTATATTTTGAACATAGACGTTTGTATGATGTGGACTTGTCTTTGGAGTTTGGAAGTTATGTTGTTTTTGTGGTGAATTCTTGATTCTCCAGATTTGGAGTTGTGTATTGCATGGAGGAGGATTTTGGATCTTTTGACTGTGTTCTTTGTTTCAAGGGGACTGGAGAATGTGTAAAGGAATCATAAATGTGTTGAAATGAGTGGTGGAAATGTTCTTATGTCTTCTTGAGGTCATGTTTGACTTTGTTTTGAATTTGTGCCATGGGATTGAATTGTGTATTGGAAATGGATTTTTGAATTTGGTTAGTTTTGATTATTATTATTATTATTTTCATTTCCTTTTACTGAAATAGAGAGGTTTTGATCTGGGTTTGTATATCTGTTTTCAACTTCATGCTTATCGTTGACATTTGTGCCTTTTGTTGGGATGACAGTGTCTTCCCTAGTGGTCCTAGAAATGAACTTTTGAGAGCTGTTTCTAACATTATGCTAGGCTGTTAAGTAGTGCAATGGGAGTTTTTCATGGCTCCCTTGTGTCTTATGTAACCATGGAGTTTCATTTGGGGTTCATTTTGATCCGCAAGGATTGCTTTTGTTTGTTTTCCCCTATTATAAAAAGATCTTTTTCTGAATCAAATTCATCTTCATCGTTCCCCCCACCCCCCTAATAAATAAATAAAATAGTGGTTCTACATCTGAACTGCTACTGCTAGGTTGTTTTAATCATTTTTCAATATAAGTGATTATTTAATCGTTCAATTTTTACTCATCTCTCTATCTCTCTGTTGATAGTTACATTTAATTTATTTTTATTTTCCTACTTATAGTTATTATTTTGTATAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTAATTGTGCTTTTACCCTACATTTTTTTTCTGACCTTGCAGATAGCATGTACAAGTAACTGTATGTTTATTATGCTGCATTTCTCAGATTTGCATTTTGTGTACTTATCAAGATGAGCTGCTGGATTTTTTAAAACAAATTTGCTTGCGTTTCACTTATCAAATGAATGATTAGAACTTTATGTGTGAACCTGTAATACAGTGGCTAGATTACGGGAAATAGTTAGTGGCGCAATGTCATATGCTTTATTCTTTGTGTGTTTTGCAGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGTCTGTTATCTTTATATTTACATCCTTCTCCAGTTACTTTCATCATGTCAAACATCTTGTCAAGTCTAGGTTTGTATATCATATTTGTGCTTACAATAATATGTGATTACTGGTAAAGAACATACAAGTGGCCATTATGACGTGGTCTGATACAATCATGTAAAAATGGCTTAGGTCTAGAAGATTCTCTTTATATTCCTTATATTTACTGTATCATTAATGTCATGCCAATAAGATGGTAGATGTTGTATGTCATTTATTACTGAAGAATCTTCAATTGTTAATAGTTTTGGACATTGAAACTCGCATAAGGGAAAAGTGAAATCTTGATTGAAGTTCCTTTTTCCTTAAAAAAGGTAACTGTTAGGTAACCTGATTTGAATTCTGCTACTTATTTTGGTTCACAATTGGTTACTGCAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAGAGTCTTGTATGCAGTATTCCATTTTCTTGTGCTCCTGTTTGTAGGAGGCTTATAATTTGCTAATAGAAGTATTTTTTCCCCAAAAAAATAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGGTACCGCAATCATTCTTCTCTCCAGTTGTTAAGTTTCTTTTCCCTCTCCTCTTGTATGTTTCAAATACTTATTCTGTATAAGTTTGGTTGGTGGTGGTGCAGACATTGGATCTCCTAGACCTGTGTGAGCAAGCAGGTTCAGCATCATAAGCTAATCAACAATGAGAAGCTTATGCAGCACACTAAATGGCGAATGAAGAGGGCTCAATGGTTCCTGTCAGCTAAGGCTAAGACACAGATTTTTCAAAGAGCGCAAGCTTAGGATGAATCTGCTGATCAAGCAGGGAGAATAGTGAGTTTGGTGAGTGGGGGCTGAAGCCAAAATAAGGGAAAAAAAATATTTGTATCTTCTTGTATTGTTGTATTGTATCATCAGACAAAGGTGAGTAGATAATGTAATAGTGAATGATAGAGCCATATATATGGATAAAAAAATGCAGCCATATTTTAGGCTTGTGTGTTTCTTTCTTATCAAAGACTTTTATGGGTTGGTGCAACACAACAGGCACTGTTATGTTCTTTCTATTATTAGCTTGAAAGAAAAAAAAGTAATGAAAAATTAAGAGATTTGGATATTGAACTATTATTTTTAATTTAGTCTTTGTTAATGTGTATCAGCATTTGGAAGGAAAGATGTAAAATGCATAGTCAAATTTCAAAGCACGATAATG ATGAAAACTATTGGAGGACAATTTGGTGATGGCGTTTCTTTAAAAACCCAAAAGATCCTTCCTCTTTACTCCTCTGTCTCCCCTGTCGCTCGGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGACATTGGATCTCCTAGACCTGTGTGAGCAAGCAGGTTCAGCATCATAAGCTAATCAACAATGAGAAGCTTATGCAGCACACTAAATGGCGAATGAAGAGGGCTCAATGGTTCCTGTCAGCTAAGGCTAAGACACAGATTTTTCAAAGAGCGCAAGCTTAGGATGAATCTGCTGATCAAGCAGGGAGAATAGTGAGTTTGGTGAGTGGGGGCTGAAGCCAAAATAAGGGAAAAAAAATATTTGTATCTTCTTGTATTGTTGTATTGTATCATCAGACAAAGGTGAGTAGATAATGTAATAGTGAATGATAGAGCCATATATATGGATAAAAAAATGCAGCCATATTTTAGGCTTGTGTGTTTCTTTCTTATCAAAGACTTTTATGGGTTGGTGCAACACAACAGGCACTGTTATGTTCTTTCTATTATTAGCTTGAAAGAAAAAAAAGTAATGAAAAATTAAGAGATTTGGATATTGAACTATTATTTTTAATTTAGTCTTTGTTAATGTGTATCAGCATTTGGAAGGAAAGATGTAAAATGCATAGTCAAATTTCAAAGCACGATAATG ATGAAAACTATTGGAGGACAATTTGGTGATGGCGTTTCTTTAAAAACCCAAAAGATCCTTCCTCTTTACTCCTCTGTCTCCCCTGTCGCTCGGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGACATTGGATCTCCTAGACCTGTGTGAGCAAGCAGGTTCAGCATCATAA MKTIGGQFGDGVSLKTQKILPLYSSVSPVARLHIKPPSFSLTNSGSLNLGLLTLRDLHSFIDITIKCCNMDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGERMNNLDFSKSTLDARPREKFGFQEDNKFESFNFNMLSLDSKMTDPVNKSSLRNGIYNMNAVYVKNNTNVAGNLPGAKFSGNDYINKDLTNYSSTNNNVGENANSINAIDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCRALEEDSFRPVLHHYDGPKFRLELSIPETLDLLDLCEQAGSAS* Homology
BLAST of CsGy3G023960 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 3.2e-76 Identity = 167/330 (50.61%), Postives = 202/330 (61.21%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 3.5e-75 Identity = 134/174 (77.01%), Postives = 151/174 (86.78%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 3.0e-74 Identity = 165/352 (46.88%), Postives = 209/352 (59.38%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 3.0e-74 Identity = 152/254 (59.84%), Postives = 180/254 (70.87%), Query Frame = 0
BLAST of CsGy3G023960 vs. NCBI nr
Match: XP_004145666.2 (uncharacterized protein LOC101215772 [Cucumis sativus] >KGN58174.1 hypothetical protein Csa_017566 [Cucumis sativus]) HSP 1 Score: 760 bits (1962), Expect = 3.64e-277 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
BLAST of CsGy3G023960 vs. NCBI nr
Match: KAG6581097.1 (hypothetical protein SDJN03_21099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 622 bits (1603), Expect = 4.52e-223 Identity = 297/315 (94.29%), Postives = 310/315 (98.41%), Query Frame = 0
BLAST of CsGy3G023960 vs. NCBI nr
Match: XP_008450102.1 (PREDICTED: B2 protein [Cucumis melo]) HSP 1 Score: 615 bits (1585), Expect = 7.87e-221 Identity = 300/304 (98.68%), Postives = 302/304 (99.34%), Query Frame = 0
BLAST of CsGy3G023960 vs. NCBI nr
Match: XP_038897034.1 (B2 protein [Benincasa hispida]) HSP 1 Score: 612 bits (1577), Expect = 1.30e-219 Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of CsGy3G023960 vs. NCBI nr
Match: KAA0042911.1 (B2 protein [Cucumis melo var. makuwa] >TYK05313.1 B2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 608 bits (1568), Expect = 1.01e-217 Identity = 296/303 (97.69%), Postives = 299/303 (98.68%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy TrEMBL
Match: A0A0A0LB43 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585860 PE=4 SV=1) HSP 1 Score: 760 bits (1962), Expect = 1.76e-277 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy TrEMBL
Match: A0A1S3BP62 (B2 protein OS=Cucumis melo OX=3656 GN=LOC103491791 PE=4 SV=1) HSP 1 Score: 615 bits (1585), Expect = 3.81e-221 Identity = 300/304 (98.68%), Postives = 302/304 (99.34%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy TrEMBL
Match: A0A5D3C009 (B2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001340 PE=4 SV=1) HSP 1 Score: 608 bits (1568), Expect = 4.88e-218 Identity = 296/303 (97.69%), Postives = 299/303 (98.68%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy TrEMBL
Match: A0A6J1F9B6 (B2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111442004 PE=4 SV=1) HSP 1 Score: 598 bits (1542), Expect = 1.46e-214 Identity = 287/304 (94.41%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of CsGy3G023960 vs. ExPASy TrEMBL
Match: A0A6J1J1D1 (B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482521 PE=4 SV=1) HSP 1 Score: 598 bits (1541), Expect = 2.08e-214 Identity = 286/304 (94.08%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CsGy3G023960 vs. TAIR 10
Match: AT3G27090.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 453.8 bits (1166), Expect = 1.4e-127 Identity = 220/299 (73.58%), Postives = 251/299 (83.95%), Query Frame = 0
BLAST of CsGy3G023960 vs. TAIR 10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 280.4 bits (716), Expect = 2.1e-75 Identity = 152/254 (59.84%), Postives = 180/254 (70.87%), Query Frame = 0
BLAST of CsGy3G023960 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22 Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of CsGy3G023960 vs. TAIR 10
Match: AT3G11000.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22 Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of CsGy3G023960 vs. TAIR 10
Match: AT3G11000.2 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22 Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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