CsGy3G023940 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G023940
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	YrdC-like domain-containing protein
Location	Gy14Chr3: 23943589 .. 23947922 (+)
RNA-Seq Expression	CsGy3G023940
Synteny	CsGy3G023940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATTGCATGCCTATTTATTTATTTATTTATGTAATGATGAAAAAAGAAAATCCAATTGAAATGTGACGTGGCATTCCAGGTGGGAAGTTCTATCTATGAACTGTGCCTCCTCTCCGATCACAGCTTCTCCCCTCTCTTTTCCTTCTCAGTTCCTAATTCCGGCGGTGCACTCACGCTGGTTCCCCAATCTCCCAAATGATCATCAATGTCAAACCCGGCCTACATCCTTCTACTGCTTCTTCTCTCTCTTCCTCTCGGGCTTTCGCACCAATACGCTTCCCTTCGCCTCCATCTGCCACTCCTTTCGACGGTTTTGAAACTTCCCGCCGCCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAGTACTCGGCTCCACGCTTCACCAAGGTCCTCTCCTTCCTAACTACTTCTGTGTTTTTTTTTCAGCTTCATTATACCATGCCCTCGCTCCTACTTGTTCTATATGAAACTCTTATCGCTATTGCTCCGGATAGAATATCTAGTGGTGGAGGTAGAGTTGCGACAGGTGAATTAAGCATTTACGCTGTTTTCGTCGCTTATTTATTTTTACACTCTAGATAGATAATTAGTAAATTTTGCAGGAGATTGTGTTGTGGATTTGAACTGTTGGAAACACTTCTGACTGGTTAAGATTTTCCCTTCTGCGTGTGTGCGTTTCTTGTTGGGAGAGGGTGATATTATATGAACACTACTCTACTTCCACCGTGATCATATTCCAGTTTGGGATGCTTTATTGCTAGTTTTTGTTGGGAGTTAATTCAGTTGGGAATGAAATTTGGAAATTAATGAAGTTATTAGACTTGTGTTATTGATATGCTTAAAGTTACTATGGTCTTTACCAGGAAGGGAGCTTGATATATGTCAAAGCTGAATCAGGAGAGGACGGCTGGAAATTAGACCCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCTACTGATACCGTGTATTTCCCTCTTACTTTATTTCACTCTCACCTTTTCAGATTTTTTTATTGTTATCATTGCTGACTCTCAAGTTGAAATTGGACGCTTGAACGAATAAATTTGTTCATAGTTAGAAAGAATCATATTTTCAATTTTTGTGTCATGCCACTCAGAAATTCAGAATTTAGGTTGTATTACCTCTTTTGGGAACAAGCTTCAAACTTCTGCAATAAATTTTTGGTTTTCCATAAATATACTTGCAATATTATTGGTTCCTTAAAATTGATTGTATCTGTATGGATCTTCTGATTGACGGATGAGAGTTCTCAAGGAAATGTAGAAGGTTTAATTTTGTGATCTTAAAGTTTACAGTGATCAGGAAAGCAGCAGGATAAATTCCTTTTTTGTTCTCACATTATTTATTATGATCTTGGTGGTTCATTTCATGAGTGTTGATTTCACTGCATTTTTGTTCCCTTGTGTACGTCTTCTTTGTCTGTCTTTTTATTTTTAACGGGTATGTATGCTTGTATTTTTCAAGGTATGGAATTGTTTGTGATCTGAAGAACCCCTCAGCCATTGAACGAATGCAGAGGTTGAAGTTGTTAATTTGTTTTGCTAGAAACTGTATTTGGTTAGATACTTCAGCTTCTCTCTCCTGCTGTTAAAGTTTCTTGTTTTGTTTAATGCAGGATCAAGAATATAGAGCCTACAAAGGTATCGTTATTTTTTACAATCTCTTTTATGTGCTTTACGATAATGCTCATATGGTCCTTCAAACTGTTGAACATCAATGCTCAAATGCGTATAATAAAGTTACTGAACAAGATGGTTTATTCTACTTAGATCCCTCATTTCTGTCTTCTATACAACCCACCTTTTCATTTTTCCATTATGCTTCTTAATTTTTACTTCTAATTAACTATGCAGCCTCTGAGCATTTTGTGCCGCTCCTTCCGGGACATTGATAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAGTATATTTCGCATGGTTAAGCATTGTCTACCTGGACCAGTGAGTGGTTCTGCTAATCCTTCCTTATGACGATAACTCCATATTATCCCTCCTTCGGATTGCATGGTGTCCCAAATGACCTCTAGTACCTTTACTTTCGTAATCATGTAGATGTGAAAAAAAAAGACATTTTCTGGTGTTGTCCTATCTTGATACATTATAGTTCGCAGTGAAACTTTCAATGTACATTGAATTCTTTAACTATAGCTATTGATTTTTGAGAGTTCTTGTGTAACAGTACACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACATTGTATAAGGTATGGCACGACCACTGCAAAATATGCATCAAGGAAGAATGTAGGTGTGCGCATTCCTGATGATTCAATTTGTCAAGCAATACTGGAAAAGATGGACGACCCATTGATATCCACAAGGTTAGAACAATTAATACTCTTCTAATTCTCTCCACCCTCTTAACAAATTTCTTGATTGGTTTAGGGGACTTAAGACCTTCTGGATTGATCATCTATTTTTCATGCCACAATTCCCCATGAGACAGTTTTCAATTTGGTGCAATCGACCATCACTATTATAACAATATTCTCTCCACTTTTTCTATCCAGTTCTGGATTGAGCACTGGAAGGGGAGACTGCTTGTGTTTATATTAATTGGCTTAAGATAGCTGTAATTATTGAATTCTTACAATAATGATGGGTAAATAAGTACTTCGGAAGTGATGATTTGTTCAAACTTCAATCTATACATTTGCTGTTCTTTCAGTGTCAAATCCCCGAAGGAAAATGAGTGGTTGCTCGACCCAGTTGTCATAGCTGATATCTATGGACAAGAGGTATGAATAAATCTTACAGAGGCTGTGTGATTGTTTATGCTAATTTCTGCAGTTATGCCATTTCCCCCCCTGAAAGCGGGTTGTATGCTTCAAATAGGGTCTGGATTTTGTGGTGGATGGTGGAGTTAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTCCAAAGATTTTGCGGCAAGGGAAGGTAATTCATTAGTCATTTCCTTTCTAGTATGCTACCCCCTAAATTATGATTACACTCATCTCTTGCAATAACGTATGGAGCAGTATGGTAATGAATAGTACTGTCATTCAGTCAAAAACAATATTTTCTATTAACTTCAGATGAAACAGAATCTGAAGTTGATCATTCATTTCTTTACCATCCTGATCCCAATGATCAATCCTCATGGAATGGAATAAGCACCATCATTTCAAGTTTCTGTTGGATTTGGATGATGAATTATTTTTCATTGTCTTCCCACTTTTTGCTCGAATGATTTGCAACGTCCAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGGTGATGACGAACCAAACATAGGTGAAGATATCCGCACCTGAACTTGCCATTTTGTAGATAATCCACTGAACATATTGCATGGAAGACATGATCCAGTTGCAGTTCACAAACAAATCTGGTGGAGTTTGTACAGTGTTTGCTATTGGTATATAAACTAACACTGAAAGAGGGTGGGCCTTTCTAAGTTGAAGATCAAATGTTGCTATACTGCTTGTCTTAGAGGTTTTTTTATCAACTTGAAAATTAGATTCTCTTTTACCTACATGTAATGTAACTCATAAATATAGGCAAATGCAATCCTCATTCTAAAATTTTCTCTTAGAAGAACAGAAGAATTTACATTTTCATTTGGGGAAATTTCTAATTTGGCCCTTATTGTTCCAATGTTCACTCTAAACTTGGATAGACTTAGTTACTCACTAGTTCACTCACCGATTTGAACAAAAAGTAATGTACTACCTTTGGCAAAATTCACAAATTCTTAGGAAGAAAAAGAAAATTAATAGGAGAGGGAACCCAAATCATGTTTTTGAAACCATAACTAAAAAGTCCTCCGTTCCACAACTTCAATCTGCAGTCCTATTTTCAGACTCATAACAATCCAATCTCCTTTGTCACCCTTTATCTTTATTTGTATTTCAATCGCCCTTTATCTTTCTCAACATTGTTTTATTTGTATTTCAATTGTCATCGG

mRNA sequence

GAAGATTGCATGCCTATTTATTTATTTATTTATGTAATGATGAAAAAAGAAAATCCAATTGAAATGTGACGTGGCATTCCAGGTGGGAAGTTCTATCTATGAACTGTGCCTCCTCTCCGATCACAGCTTCTCCCCTCTCTTTTCCTTCTCAGTTCCTAATTCCGGCGGTGCACTCACGCTGGTTCCCCAATCTCCCAAATGATCATCAATGTCAAACCCGGCCTACATCCTTCTACTGCTTCTTCTCTCTCTTCCTCTCGGGCTTTCGCACCAATACGCTTCCCTTCGCCTCCATCTGCCACTCCTTTCGACGGTTTTGAAACTTCCCGCCGCCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAGTACTCGGCTCCACGCTTCACCAAGGAAGGGAGCTTGATATATGTCAAAGCTGAATCAGGAGAGGACGGCTGGAAATTAGACCCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCTACTGATACCGTGTATGGAATTGTTTGTGATCTGAAGAACCCCTCAGCCATTGAACGAATGCAGAGGATCAAGAATATAGAGCCTACAAAGCCTCTGAGCATTTTGTGCCGCTCCTTCCGGGACATTGATAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAGTATATTTCGCATGGTTAAGCATTGTCTACCTGGACCATACACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACATTGTATAAGGTATGGCACGACCACTGCAAAATATGCATCAAGGAAGAATGTAGGTGTGCGCATTCCTGATGATTCAATTTGTCAAGCAATACTGGAAAAGATGGACGACCCATTGATATCCACAAGTGTCAAATCCCCGAAGGAAAATGAGTGGTTGCTCGACCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGAGTTAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTCCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGGTGATGACGAACCAAACATAGGTGAAGATATCCGCACCTGAACTTGCCATTTTGTAGATAATCCACTGAACATATTGCATGGAAGACATGATCCAGTTGCAGTTCACAAACAAATCTGGTGGAGTTTGTACAGTGTTTGCTATTGGTATATAAACTAACACTGAAAGAGGGTGGGCCTTTCTAAGTTGAAGATCAAATGTTGCTATACTGCTTGTCTTAGAGGTTTTTTTATCAACTTGAAAATTAGATTCTCTTTTACCTACATGTAATGTAACTCATAAATATAGGCAAATGCAATCCTCATTCTAAAATTTTCTCTTAGAAGAACAGAAGAATTTACATTTTCATTTGGGGAAATTTCTAATTTGGCCCTTATTGTTCCAATGTTCACTCTAAACTTGGATAGACTTAGTTACTCACTAGTTCACTCACCGATTTGAACAAAAAGTAATGTACTACCTTTGGCAAAATTCACAAATTCTTAGGAAGAAAAAGAAAATTAATAGGAGAGGGAACCCAAATCATGTTTTTGAAACCATAACTAAAAAGTCCTCCGTTCCACAACTTCAATCTGCAGTCCTATTTTCAGACTCATAACAATCCAATCTCCTTTGTCACCCTTTATCTTTATTTGTATTTCAATCGCCCTTTATCTTTCTCAACATTGTTTTATTTGTATTTCAATTGTCATCGG

Coding sequence (CDS)

ATGATCATCAATGTCAAACCCGGCCTACATCCTTCTACTGCTTCTTCTCTCTCTTCCTCTCGGGCTTTCGCACCAATACGCTTCCCTTCGCCTCCATCTGCCACTCCTTTCGACGGTTTTGAAACTTCCCGCCGCCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAGTACTCGGCTCCACGCTTCACCAAGGAAGGGAGCTTGATATATGTCAAAGCTGAATCAGGAGAGGACGGCTGGAAATTAGACCCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCTACTGATACCGTGTATGGAATTGTTTGTGATCTGAAGAACCCCTCAGCCATTGAACGAATGCAGAGGATCAAGAATATAGAGCCTACAAAGCCTCTGAGCATTTTGTGCCGCTCCTTCCGGGACATTGATAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAGTATATTTCGCATGGTTAAGCATTGTCTACCTGGACCATACACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACATTGTATAAGGTATGGCACGACCACTGCAAAATATGCATCAAGGAAGAATGTAGGTGTGCGCATTCCTGATGATTCAATTTGTCAAGCAATACTGGAAAAGATGGACGACCCATTGATATCCACAAGTGTCAAATCCCCGAAGGAAAATGAGTGGTTGCTCGACCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGAGTTAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTCCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGGTGATGACGAACCAAACATAGGTGAAGATATCCGCACCTGA

Protein sequence

MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNIGEDIRT*

Homology

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BLAST of CsGy3G023940 vs. ExPASy Swiss-Prot
Match: P0AFR5 (Uncharacterized protein YciO OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yciO PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25
Identity = 62/207 (29.95%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 87  LDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDID 146
           ++  V ++++G V V PTD+ Y + C +++ +A+ER+ RI+ +      +++CR   ++ 
Sbjct: 17  INQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELS 76

Query: 147 KYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVG 206
            Y+           +  FR++K+  PG YTFIL  +KE+P+  ++          RK +G
Sbjct: 77  TYSF--------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIG 136

Query: 207 VRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVA 266
           +R+P + I QA+LE + +P++STS+  P       DP  I D   ++ +D ++ GG    
Sbjct: 137 MRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKQVDLIIHGGYLGQ 196

Query: 267 DPSTVVDMTITPPKILRQGKGARLPWM 294
            P+TV+D+T   P ++R+G G   P++
Sbjct: 197 KPTTVIDLTDDTPVVVREGVGDVKPFL 206

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BLAST of CsGy3G023940 vs. ExPASy Swiss-Prot
Match: P0AFR4 (Uncharacterized protein YciO OS=Escherichia coli (strain K12) OX=83333 GN=yciO PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25
Identity = 62/207 (29.95%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 87  LDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDID 146
           ++  V ++++G V V PTD+ Y + C +++ +A+ER+ RI+ +      +++CR   ++ 
Sbjct: 17  INQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELS 76

Query: 147 KYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVG 206
            Y+           +  FR++K+  PG YTFIL  +KE+P+  ++          RK +G
Sbjct: 77  TYSF--------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIG 136

Query: 207 VRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVA 266
           +R+P + I QA+LE + +P++STS+  P       DP  I D   ++ +D ++ GG    
Sbjct: 137 MRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKQVDLIIHGGYLGQ 196

Query: 267 DPSTVVDMTITPPKILRQGKGARLPWM 294
            P+TV+D+T   P ++R+G G   P++
Sbjct: 197 KPTTVIDLTDDTPVVVREGVGDVKPFL 206

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BLAST of CsGy3G023940 vs. ExPASy Swiss-Prot
Match: P0AFR6 (Uncharacterized protein YciO OS=Shigella flexneri OX=623 GN=yciO PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25
Identity = 62/207 (29.95%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 87  LDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDID 146
           ++  V ++++G V V PTD+ Y + C +++ +A+ER+ RI+ +      +++CR   ++ 
Sbjct: 17  INQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELS 76

Query: 147 KYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVG 206
            Y+           +  FR++K+  PG YTFIL  +KE+P+  ++          RK +G
Sbjct: 77  TYSF--------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIG 136

Query: 207 VRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVA 266
           +R+P + I QA+LE + +P++STS+  P       DP  I D   ++ +D ++ GG    
Sbjct: 137 MRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKQVDLIIHGGYLGQ 196

Query: 267 DPSTVVDMTITPPKILRQGKGARLPWM 294
            P+TV+D+T   P ++R+G G   P++
Sbjct: 197 KPTTVIDLTDDTPVVVREGVGDVKPFL 206

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BLAST of CsGy3G023940 vs. ExPASy Swiss-Prot
Match: P45103 (Uncharacterized protein HI_1198 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1198 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.1e-25
Identity = 63/208 (30.29%), Postives = 117/208 (56.25%), Query Frame = 0


Query: 87  LDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDID 146
           ++  V +L++G V V PTD+ Y + C + +  A++R+  I+ +      +++C    ++ 
Sbjct: 17  INQAVEILQKGGVIVYPTDSGYALGCMMGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELS 76

Query: 147 KYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVG 206
            Y         + +++ +R++K+  PG YTFILTA+KELP+  +         + RK +G
Sbjct: 77  TY--------ARVNNTAYRLIKNNTPGRYTFILTATKELPRRLMT--------SKRKTIG 136

Query: 207 VRIPDDSICQAILEKMDDPLISTSVKSP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRV 266
           +R+PD+ I   +L  + +P++S S+  P +E+    DP  I D   +  +D ++ GG   
Sbjct: 137 LRVPDNKIALDLLSALGEPILSCSLMLPNEEHTTQSDPEEIRDRL-EHQVDLIIHGGYLG 196

Query: 267 ADPSTVVDMTITPPKILRQGKGARLPWM 294
            +P+TVVD+T   P ILR+G G+  P++
Sbjct: 197 QEPTTVVDLTEESPVILREGSGSTAPFI 207

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BLAST of CsGy3G023940 vs. ExPASy Swiss-Prot
Match: Q9UYB2 (Threonylcarbamoyl-AMP synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=sua5 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14
Identity = 57/213 (26.76%), Postives = 94/213 (44.13%), Query Frame = 0


Query: 74  IYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTK 133
           I +      + WK+      ++EG +   PT+TVYG+  +  + +A++R+   K      
Sbjct: 3   IIINVRERIEEWKIRIAAGFIREGKLVAFPTETVYGLGANALDENAVKRIFEAKGRPADN 62

Query: 134 PLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYG 193
           PL I   SF  ++      P            + K   PGP T +L  S+ +P+  I  G
Sbjct: 63  PLIIHIASFEQLEVLAKEIP-------EEAEMLAKRFWPGPLTLVLPKSEVVPR-VITGG 122

Query: 194 TTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQE 253
             T        V VR+P   I   ++E  + P+ + S     +        V  D YG+ 
Sbjct: 123 LDT--------VAVRMPAHEIALKLIELSERPIAAPSANISGKPSPTSAHHVAEDFYGK- 182

Query: 254 GLDFVVDGG-VRVADPSTVVDMTITPPKILRQG 286
            ++ ++DGG  R+   STV+D+T  PP +LR G
Sbjct: 183 -IECIIDGGETRIGVESTVIDLTEWPPVLLRPG 197

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BLAST of CsGy3G023940 vs. NCBI nr
Match: XP_004145661.1 (uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus] >KGN58172.1 hypothetical protein Csa_017456 [Cucumis sativus])

HSP 1 Score: 624 bits (1610), Expect = 1.13e-225
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120
           KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180
           ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT
Sbjct: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PNIGEDIRT 309
           PNIGEDIRT
Sbjct: 301 PNIGEDIRT 309

[Close]

BLAST of CsGy3G023940 vs. NCBI nr
Match: XP_008450106.1 (PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo])

HSP 1 Score: 597 bits (1540), Expect = 5.29e-215
Identity = 294/309 (95.15%), Postives = 303/309 (98.06%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINV+  LHPSTASSLSS R+FAPIRFPSPPSA+ FDGF TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120
           KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180
           ERM+RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILT
Sbjct: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD+ICQAILEKMD+PLISTSVKSPKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PNIGEDIRT 309
           PN+GEDIRT
Sbjct: 301 PNLGEDIRT 309

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BLAST of CsGy3G023940 vs. NCBI nr
Match: TYK05316.1 (yrdC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 576 bits (1485), Expect = 6.48e-206
Identity = 294/353 (83.29%), Postives = 303/353 (85.84%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINV+  LHPSTASSLSS R+FAPIRFPSPPSA+ FDGF TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTK--------------------------------------------EGSLIYV 120
           KYSAPRFTK                                            EGSLIYV
Sbjct: 61  KYSAPRFTKVLSLLTTPVCFSASLCPRSYLFYMKLLSLLLGIEYLVVQVELRQEGSLIYV 120

Query: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLS 180
           KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERM+RIKNIEP+KPLS
Sbjct: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMRRIKNIEPSKPLS 180

Query: 181 ILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240
           ILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT
Sbjct: 181 ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240

Query: 241 AKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLD 300
           AKYASRKNVGVRIPDD+ICQAILEKMD+PLISTSVKSPKENEWLLDPVVIADIYGQEGLD
Sbjct: 241 AKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWLLDPVVIADIYGQEGLD 300

Query: 301 FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNIGEDIRT 309
           FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPN+GEDIRT
Sbjct: 301 FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNLGEDIRT 353

[Close]

BLAST of CsGy3G023940 vs. NCBI nr
Match: XP_031739482.1 (uncharacterized protein LOC101214648 isoform X1 [Cucumis sativus])

HSP 1 Score: 574 bits (1480), Expect = 7.96e-206
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120
           KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180
           ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT
Sbjct: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGK 286
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGK
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGK 286

[Close]

BLAST of CsGy3G023940 vs. NCBI nr
Match: XP_038877956.1 (uncharacterized protein YciO [Benincasa hispida])

HSP 1 Score: 564 bits (1454), Expect = 8.16e-202
Identity = 278/308 (90.26%), Postives = 293/308 (95.13%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MI+NVK  ++PSTASS SS R++APIRFP  PSA  F G ETSRRLQVLA VVKRSPKRL
Sbjct: 1   MIVNVKSDVYPSTASSFSSVRSYAPIRFPPSPSAIRFHGSETSRRLQVLARVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120
           KYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180
           ER++RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILT
Sbjct: 121 ERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD+ICQAILEKMD PLISTSVK+ KENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDAICQAILEKMDAPLISTSVKNLKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300
           LDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE
Sbjct: 241 LDPVVIADIYGEEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PNIGEDIR 308
           P +GEDIR
Sbjct: 301 PTVGEDIR 308

[Close]

BLAST of CsGy3G023940 vs. ExPASy TrEMBL
Match: A0A0A0LBV9 (YrdC-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585350 PE=3 SV=1)

HSP 1 Score: 624 bits (1610), Expect = 5.46e-226
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120
           KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180
           ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT
Sbjct: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PNIGEDIRT 309
           PNIGEDIRT
Sbjct: 301 PNIGEDIRT 309

[Close]

BLAST of CsGy3G023940 vs. ExPASy TrEMBL
Match: A0A1S3BMX4 (uncharacterized protein YciO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491794 PE=3 SV=1)

HSP 1 Score: 597 bits (1540), Expect = 2.56e-215
Identity = 294/309 (95.15%), Postives = 303/309 (98.06%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINV+  LHPSTASSLSS R+FAPIRFPSPPSA+ FDGF TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120
           KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180
           ERM+RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILT
Sbjct: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD+ICQAILEKMD+PLISTSVKSPKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PNIGEDIRT 309
           PN+GEDIRT
Sbjct: 301 PNLGEDIRT 309

[Close]

BLAST of CsGy3G023940 vs. ExPASy TrEMBL
Match: A0A5D3C4N1 (YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001410 PE=3 SV=1)

HSP 1 Score: 576 bits (1485), Expect = 3.14e-206
Identity = 294/353 (83.29%), Postives = 303/353 (85.84%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINV+  LHPSTASSLSS R+FAPIRFPSPPSA+ FDGF TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTK--------------------------------------------EGSLIYV 120
           KYSAPRFTK                                            EGSLIYV
Sbjct: 61  KYSAPRFTKVLSLLTTPVCFSASLCPRSYLFYMKLLSLLLGIEYLVVQVELRQEGSLIYV 120

Query: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLS 180
           KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERM+RIKNIEP+KPLS
Sbjct: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMRRIKNIEPSKPLS 180

Query: 181 ILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240
           ILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT
Sbjct: 181 ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240

Query: 241 AKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLD 300
           AKYASRKNVGVRIPDD+ICQAILEKMD+PLISTSVKSPKENEWLLDPVVIADIYGQEGLD
Sbjct: 241 AKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWLLDPVVIADIYGQEGLD 300

Query: 301 FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNIGEDIRT 309
           FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPN+GEDIRT
Sbjct: 301 FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNLGEDIRT 353

[Close]

BLAST of CsGy3G023940 vs. ExPASy TrEMBL
Match: A0A5A7TLP4 (YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004380 PE=3 SV=1)

HSP 1 Score: 555 bits (1431), Expect = 6.57e-198
Identity = 289/359 (80.50%), Postives = 298/359 (83.01%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60
           MIINV+  LHPSTASSLSS R+FAPIRFPSPPSA+ FDGF TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTK--------------------------------------------EGSLIYV 120
           KYSAPRFTK                                            EGSLIYV
Sbjct: 61  KYSAPRFTKVLSLLTTPVCFSASLCPRSYLFYMKLLSLLLGIEYLVVQVELRQEGSLIYV 120

Query: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIK------NIE 180
           KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERM+R+K       I 
Sbjct: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMRRLKLLICSGRIC 180

Query: 181 PTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCI 240
              PLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCI
Sbjct: 181 IWLPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI 240

Query: 241 RYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIY 300
           RYGTTTAKYASRKNVGVRIPDD+ICQAILEKMD+PLISTSVKSPKENEWLLDPVVIADIY
Sbjct: 241 RYGTTTAKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWLLDPVVIADIY 300

Query: 301 GQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNIGEDIRT 309
           GQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPN+GEDIRT
Sbjct: 301 GQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNLGEDIRT 359

[Close]

BLAST of CsGy3G023940 vs. ExPASy TrEMBL
Match: A0A6J1J9P6 (uncharacterized protein LOC111482522 OS=Cucurbita maxima OX=3661 GN=LOC111482522 PE=3 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 4.20e-188
Identity = 265/302 (87.75%), Postives = 280/302 (92.72%), Query Frame = 0


Query: 1   MIINVKPGLHPSTASS-LSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKR 60
           MI+NVK   +PS ASS LSS R+FAPIRFPSPP A  FDG  TSRRLQVLAM VKRSPKR
Sbjct: 1   MIVNVKSSGYPSAASSSLSSVRSFAPIRFPSPPRAVRFDGSRTSRRLQVLAMAVKRSPKR 60

Query: 61  LKYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSA 120
           LKYSAPRFTK+GSL+YVKAESGED WKL+PIV+LLKEGAVGVIPTDTVY IVCDLKNPSA
Sbjct: 61  LKYSAPRFTKDGSLLYVKAESGEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSA 120

Query: 121 IERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFIL 180
           IERM+RIKNIEP+KPLSILC SFRDIDKYTTGFP GDGQGHS+IFRMVKHCLPGPYTFIL
Sbjct: 121 IERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFIL 180

Query: 181 TASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEW 240
           TASKELPK  I YGTTTAK+ASRKNVGVRIPDD+ICQA+LEKMD PLISTSVK  KENEW
Sbjct: 181 TASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEW 240

Query: 241 LLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDD 300
           LLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPK+LRQGKGARLPWMVAEGDD
Sbjct: 241 LLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGARLPWMVAEGDD 300

[Close]

BLAST of CsGy3G023940 vs. TAIR 10
Match: AT3G01920.1 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 399.1 bits (1024), Expect = 3.4e-111
Identity = 190/285 (66.67%), Postives = 228/285 (80.00%), Query Frame = 0


Query: 29  PSP-----PSATPFDGFETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLIYVKAE-SGE 88
           PSP     PS  P     + RR  ++A+  KRSPKRLKYS PRFTKEG L+Y++ +  G 
Sbjct: 20  PSPMTHRRPSTLPSTASLSPRR-YIVALAAKRSPKRLKYSTPRFTKEGELVYIEVDPCGV 79

Query: 89  DGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSF 148
           D WKL P+++LLK+GAVGVIPTDTVY I CD KN SA+ER++RIK IE +KPLSILCRS 
Sbjct: 80  DSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSL 139

Query: 149 RDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASR 208
           RDID +T GFPRGDG GH+++FR VK CLPGPYTFILTASKELPK C+ YGTT+ KYASR
Sbjct: 140 RDIDTFTMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASR 199

Query: 209 KNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYGQEGLDFVVDGG 268
           KNVGVRI DD++CQAIL++MD PLI TSVK PKENEW++DP  I DIYG EGLDFVVDGG
Sbjct: 200 KNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEGLDFVVDGG 259

Query: 269 VRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNIGEDI 308
           +RVA+PST+VDMT   PK++R+GKG  LPWMV E DDE ++ +D+
Sbjct: 260 IRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVE-DDESSLRQDL 302

[Close]

BLAST of CsGy3G023940 vs. TAIR 10
Match: AT5G60590.2 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-09
Identity = 55/213 (25.82%), Postives = 88/213 (41.31%), Query Frame = 0


Query: 91  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDIDKY-- 150
           +  +K   V  +PTDT+YG  CD  +  A+ R+  IK  + T PL+I      DI +   
Sbjct: 80  IEAIKSEKVIAVPTDTLYGFACDACSLEAVSRIYEIKGRKLTSPLAICVGDVLDIKRVAT 139

Query: 151 TTGFPRGDGQGHSSIFRMVKHCLPGPYTFIL-TASKELPKHCIRYGTTTAKYASRKNVGV 210
           T+  P G          ++   LPGP T +L      + +  +  G  T        +GV
Sbjct: 140 TSHLPHG----------LLDSLLPGPVTLVLQRGESSILEKSLNPGIGT--------IGV 199

Query: 211 RIPDDSICQAILEKMDDPLISTSVKSPKENEWLLDPVVIADIYG-QEGLDFVVDGGVRVA 270
           R+PD    + +       L  TS     +       V + D     +   +V DGG+  +
Sbjct: 200 RVPDCEFIREVSRGSGSVLALTSANLSGDR----SSVCVKDFENLWQHCAYVYDGGLLPS 259

Query: 271 D--PSTVVDMT-ITPPKILRQGKGARLPWMVAE 297
               ST+VD+T +   KI+R G   +    + E
Sbjct: 260 GRAGSTIVDLTKVGKYKIIRPGSAKQATVAILE 270

[Close]

BLAST of CsGy3G023940 vs. TAIR 10
Match: AT5G60590.1 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 50.8 bits (120), Expect = 2.2e-06
Identity = 29/91 (31.87%), Postives = 43/91 (47.25%), Query Frame = 0


Query: 91  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMQRIKNIEPTKPLSILCRSFRDIDKY-- 150
           +  +K   V  +PTDT+YG  CD  +  A+ R+  IK  + T PL+I      DI +   
Sbjct: 80  IEAIKSEKVIAVPTDTLYGFACDACSLEAVSRIYEIKGRKLTSPLAICVGDVLDIKRVAT 139

Query: 151 TTGFPRGDGQGHSSIFRMVKHCLPGPYTFIL 180
           T+  P G          ++   LPGP T +L
Sbjct: 140 TSHLPHG----------LLDSLLPGPVTLVL 160

The following BLAST results are available for this feature:

BLAST of CsGy3G023940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0AFR5	1.6e-25	29.95	Uncharacterized protein YciO OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700...	[more]
P0AFR4	1.6e-25	29.95	Uncharacterized protein YciO OS=Escherichia coli (strain K12) OX=83333 GN=yciO P...	[more]
P0AFR6	1.6e-25	29.95	Uncharacterized protein YciO OS=Shigella flexneri OX=623 GN=yciO PE=3 SV=1	[more]
P45103	6.1e-25	30.29	Uncharacterized protein HI_1198 OS=Haemophilus influenzae (strain ATCC 51907 / D...	[more]
Q9UYB2	3.7e-14	26.76	Threonylcarbamoyl-AMP synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=2728...	[more]

BLAST of CsGy3G023940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145661.1	1.13e-225	100.00	uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus] >KGN58172.1 hy...	[more]
XP_008450106.1	5.29e-215	95.15	PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo]	[more]
TYK05316.1	6.48e-206	83.29	yrdC domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_031739482.1	7.96e-206	100.00	uncharacterized protein LOC101214648 isoform X1 [Cucumis sativus]	[more]
XP_038877956.1	8.16e-202	90.26	uncharacterized protein YciO [Benincasa hispida]	[more]

BLAST of CsGy3G023940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBV9	5.46e-226	100.00	YrdC-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585350 P...	[more]
A0A1S3BMX4	2.56e-215	95.15	uncharacterized protein YciO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491794 ...	[more]
A0A5D3C4N1	3.14e-206	83.29	YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TLP4	6.57e-198	80.50	YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1J9P6	4.20e-188	87.75	uncharacterized protein LOC111482522 OS=Cucurbita maxima OX=3661 GN=LOC111482522...	[more]

BLAST of CsGy3G023940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01920.1	3.4e-111	66.67	DHBP synthase RibB-like alpha/beta domain	[more]
AT5G60590.2	2.2e-09	25.82	DHBP synthase RibB-like alpha/beta domain	[more]
AT5G60590.1	2.2e-06	31.87	DHBP synthase RibB-like alpha/beta domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.870.10	DHBP synthase	coord: 72..291 e-value: 4.0E-55 score: 188.0
None	No IPR available	PIRSR	PIRSR004930-1	PIRSR004930-1	coord: 85..286 e-value: 8.1E-27 score: 92.1
None	No IPR available	PANTHER	PTHR42828	DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN	coord: 17..300
IPR006070	YrdC-like domain	PFAM	PF01300	Sua5_yciO_yrdC	coord: 93..285 e-value: 1.8E-45 score: 154.6
IPR006070	YrdC-like domain	TIGRFAM	TIGR00057	TIGR00057	coord: 86..287 e-value: 2.8E-42 score: 142.2
IPR006070	YrdC-like domain	PROSITE	PS51163	YRDC	coord: 84..287 score: 22.989765
IPR017945	DHBP synthase RibB-like alpha/beta domain superfamily	SUPERFAMILY	55821	YrdC/RibB	coord: 80..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G023940.2	CsGy3G023940.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding