CsGy3G023590 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G023590
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncytochrome c oxidase subunit 5b-1, mitochondrial-like
LocationGy14Chr3: 23360506 .. 23363428 (-)
RNA-Seq ExpressionCsGy3G023590
SyntenyCsGy3G023590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTCTCCCATTTCCAAAAGAATAGAAGCTGGTGAAGGGCGAGAGAGTGAAGAGCAAACGAGAGCCAAATTCGCCGTTCAAGAGCTGCGACCTGAGATCATACCCCGAAAGTTCACAGATTTCAATCTACCATGTGGAGAAGATTGCTCTCTTCGTCTCTCAAATCCTTAAAATCACTTCCCTCATCATCTACGCCTGCATCCGCTCCCTTGGGATGCATTTCCCAAGCCCCTCGACTCGCTGCTGCTTCTCATCTTTCTCCTTCCTCGACTCTCCCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGGTAGATCTTGCACTTTTCTTCGGATTTTATACTCTCTCCATATATATGTGGAATTAATTGGTCGTCTCATTATTAATCGATTACTATCGTACAGTCGTGTCGATCTATAGTATGAGCAGGAATGCTGTTTTTATTTTCTGTGGTTGTTAATTGACTTTTTACTGTAGCTGATACTGGTCTGAAGAAGACGGTTGAGGATGTTATGCCAATCGCGACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTGAGGTGAAATTTCTTGTATTTTCTTGCTTACCTGGATCTCTTTCCGCTGCGTGTTGTTTTTTCCACGCTTCATTTCACGTTGTGAAATGTACTGGATTAAGGAGTAGTTTAAAATTTATGAATTCATTTTGATTGTCAAACTGAGCCTGGTATGGTAATTTTCAGTTTCGGAAAGCCAGGTTAAATTTTTTTTGCTTTCATTGGTTGGTTCATTTTAATTTTCCAACTGTGCGGTTTATGTTCATATTTTTTATAAGCTGGCTTCTGAAGGATGTATTTTTAGTATTGGATGCAAGTCTCATTTTAGTTGGTTTAACGTTTGCAGGGAAAAGACATTCTTGACATAAACCATCCTATTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTGCTTGTTTTGTCATTGCTAGAATTAATTTCGATGCTTTAGCTTTTATTCAAAGTTTCATTCCATGTAGATTTCAAGGCATGGCAAGAGCAATATTTATTGAGTTTACTGCTTTCACTTGAATTTAAGCTGCAGCTTTGTTGTGCTTCATTGAGATCTCAGACACTCGAAATATTTGCAAACTGATTGTTCTGAATTTTGGTTTGCAGTTTTTTTCCCTTCCATCTCCTGAATATCCATACCATTTTTCTTTCATGCTCTGTTGCACATCGTAACTTAGTAAACAACAAGAAAATTCAAAGTGAATGAGTTTGTGGATTTATATGCTTAAAAAATTAGTTAGATGTATTTCATTCCCAAATTTTTTTATTTTTGTTAGATGTATTTCATTCTCAATATTGTTTACTTTTTCCATATACGTGCCTCCTTGGTATATGTAACGAGTGTTTGATGCATGTCTAACAAATGTTGGTCCTGTGTTGAGTTTGTACAACTAGACACATCTATTTTACTTTTAAGTGTCCTATGTTGAGTTTGTACTAGTCAAAAGAGTGTCTGAGTGTCTTAAGTGTCCGATACATGTTTGAGGCGGACACACCAGCCAAACTTAAGTGTCCATGCTCCTTAGCATTTAGAAACAAGAAACTATGCGAGTTCTAATATTGGTCTCACTCCTAGCACTCCCTCGTAGGTTTTTGTTGTTCTTCTAGAGTCTCTCACCTAAATCAAGTCTAGAGATAAGGTCATTCAAAGAATCTTAGGCTTCCTTTTAAAGAAATAACCGACAATCTTATGCTCTTCTTCTAAAGCCTAATCTTGTATATCCTTTTCAACAATTTTAGTCTTCTCTGGTTTAAAAATTTTGCAGTCTTGAAGAGTTAAATGTTTGTGATTGGCTGTAAAAACTGTCTCTTTTGCTTCCATTCTTTGAAGTCTGAACTCCAAAGTGTTGATTATTTATTACAAAGCATATGAACTGGTGAATATACTTCTCAATGTTGTGATCTTTTCATAGTTTTTGTGCCAATGCCTCTTCACTTCGATGTTTTTTTGGGTACTTCAACAGATGCATTCTCTCTGTAGTTTGGATACCATTGGTATTTGGTAGATTAACTAATCAGTGACAGACTGCCGTTTGGTTTTAGATGTATGAGTTTCAACTCTTTGTAACAGCCATTATGGGTTGGTCTACTGGTAAAAGAGGAGACATAGTCTCAATAATTATCTAAGAAGTCATAGGTTTAATCAATGGTGACTACTTGCTTAGGAATTAATTTTCTATGAGTTTCTTTAACACCCAAATGTTGTAGGGTCGGGTGGGTTGTTCTTTGAGATTAGTCGAGGTATGTGTAAGTAGGCCCAAACTCTCACGAATATATAAAAAAAAGTTTGAACTCTTTGTTGCACAATTTGGTTAGAAACTTTTTACCTCATTTTGGAAGATAATTTTTTAGATTGGAAAGTTGTTTGCGGAAATAATCTTATTATATCTTGCTGGTCTGGAAATGTAGCAAGGATACATCGATTGAGACCACGGATGTCGAACCTTGGCTTTGTCATTTGGCTGGAAGCTTTGTCCTTAGTCTTTCAAAGTTGGAATATAGGTTGCATGAAGTAAGGTTCTCCTAATCTTTTACCAACCAACATTGGAAGAAGAGAATCCATAACATTACAAGGGCAAACAAAACTAAAGTTTGAAACTTTTGAAATTTTTGCCTAGCCTTAGAGATATGGGAGTTCAAGAAGAGATGTGTAGTGGATTCTTTATTTTTTTTTGGGAAAGAATGGCTATGTTGGATACAAATAAGAGGTGATCCTTCTTGAGCATAATCATATTGAATTAAACCCTTTGAAGAAAGCAGACTAAAGAAACACCTTGTACTTTCTAGGAACCTTTGGTATGCAAAACCTTTTTTCATAAATCCAAGAGAAGGGAGGGTTTTTCCTTCTCTATCCCTCCCTTCCTCCCTCTCTCTC

mRNA sequence

CTTTTCTCCCATTTCCAAAAGAATAGAAGCTGGTGAAGGGCGAGAGAGTGAAGAGCAAACGAGAGCCAAATTCGCCGTTCAAGAGCTGCGACCTGAGATCATACCCCGAAAGTTCACAGATTTCAATCTACCATGTGGAGAAGATTGCTCTCTTCGTCTCTCAAATCCTTAAAATCACTTCCCTCATCATCTACGCCTGCATCCGCTCCCTTGGGATGCATTTCCCAAGCCCCTCGACTCGCTGCTGCTTCTCATCTTTCTCCTTCCTCGACTCTCCCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGACGGTTGAGGATGTTATGCCAATCGCGACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTGAGGGAAAAGACATTCTTGACATAAACCATCCTATTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTGCTTGTTTTGTCATTGCTAGAATTAATTTCGATGCTTTAGCTTTTATTCAAAGTTTCATTCCATGTAGATTTCAAGGCATGGCAAGAGCAATATTTATTGAGTTTACTGCTTTCACTTGAATTTAAGCTGCAGCTTTGTTGTGCTTCATTGAGATCTCAGACACTCGAAATATTTGCAAACTGATTGTTCTGAATTTTGGTTTGCAGTTTTTTTCCCTTCCATCTCCTGAATATCCATACCATTTTTCTTTCATGCTCTGTTGCACATCGTAACTTAGTAAACAACAAGAAAATTCAAAGTGAATGAGTTTGTGGATTTATATGCTTAAAAAATTAGTTAGATGTATTTCATTCCCAAATTTTTTTATTTTTGTTAGATGTATTTCATTCTCAATATTGTTTACTTTTTCCATATACGTGCCTCCTTGGTATATGTAACGAGTGTTTGATGCATGTCTAACAAATGTTGGTCCTGTGTTGAGTTTGTACAACTAGACACATCTATTTTACTTTTAAGTGTCCTATGTTGAGTTTGTACTAGTCAAAAGAGTGTCTGAGTGTCTTAAGTGTCCGATACATGTTTGAGGCGGACACACCAGCCAAACTTAAGTGTCCATGCTCCTTAGCATTTAGAAACAAGAAACTATGCGAGTTCTAATATTGGTCTCACTCCTAGCACTCCCTCGTAGGTTTTTGTTGTTCTTCTAGAGTCTCTCACCTAAATCAAGTCTAGAGATAAGGTCATTCAAAGAATCTTAGGCTTCCTTTTAAAGAAATAACCGACAATCTTATGCTCTTCTTCTAAAGCCTAATCTTGTATATCCTTTTCAACAATTTTAGTCTTCTCTGGTTTAAAAATTTTGCAGTCTTGAAGAGTTAAATGTTTGTGATTGGCTGTAAAAACTGTCTCTTTTGCTTCCATTCTTTGAAGTCTGAACTCCAAAGTGTTGATTATTTATTACAAAGCATATGAACTGGTGAATATACTTCTCAATGTTGTGATCTTTTCATAGTTTTTGTGCCAATGCCTCTTCACTTCGATGTTTTTTTGGGTACTTCAACAGATGCATTCTCTCTGTAGTTTGGATACCATTGGTATTTGGTAGATTAACTAATCAGTGACAGACTGCCGTTTGGTTTTAGATGTATGAGTTTCAACTCTTTGTAACAGCCATTATGGGTTGGTCTACTGGTAAAAGAGGAGACATAGTCTCAATAATTATCTAAGAAGTCATAGGTTTAATCAATGGTGACTACTTGCTTAGGAATTAATTTTCTATGAGTTTCTTTAACACCCAAATGTTGTAGGGTCGGGTGGGTTGTTCTTTGAGATTAGTCGAGGTATGTGTAAGTAGGCCCAAACTCTCACGAATATATAAAAAAAAGTTTGAACTCTTTGTTGCACAATTTGGTTAGAAACTTTTTACCTCATTTTGGAAGATAATTTTTTAGATTGGAAAGTTGTTTGCGGAAATAATCTTATTATATCTTGCTGGTCTGGAAATGTAGCAAGGATACATCGATTGAGACCACGGATGTCGAACCTTGGCTTTGTCATTTGGCTGGAAGCTTTGTCCTTAGTCTTTCAAAGTTGGAATATAGGTTGCATGAAGTAAGGTTCTCCTAATCTTTTACCAACCAACATTGGAAGAAGAGAATCCATAACATTACAAGGGCAAACAAAACTAAAGTTTGAAACTTTTGAAATTTTTGCCTAGCCTTAGAGATATGGGAGTTCAAGAAGAGATGTGTAGTGGATTCTTTATTTTTTTTTGGGAAAGAATGGCTATGTTGGATACAAATAAGAGGTGATCCTTCTTGAGCATAATCATATTGAATTAAACCCTTTGAAGAAAGCAGACTAAAGAAACACCTTGTACTTTCTAGGAACCTTTGGTATGCAAAACCTTTTTTCATAAATCCAAGAGAAGGGAGGGTTTTTCCTTCTCTATCCCTCCCTTCCTCCCTCTCTCTC

Coding sequence (CDS)

ATGTGGAGAAGATTGCTCTCTTCGTCTCTCAAATCCTTAAAATCACTTCCCTCATCATCTACGCCTGCATCCGCTCCCTTGGGATGCATTTCCCAAGCCCCTCGACTCGCTGCTGCTTCTCATCTTTCTCCTTCCTCGACTCTCCCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGACGGTTGAGGATGTTATGCCAATCGCGACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTGAGGGAAAAGACATTCTTGACATAAACCATCCTATTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTGCTTGTTTTGTCATTGCTAGAATTAATTTCGATGCTTTAGCTTTTATTCAAAGTTTCATTCCATGTAGATTTCAAGGCATGGCAAGAGCAATATTTATTGAGTTTACTGCTTTCACTTGA

Protein sequence

MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKVGVVACFVIARINFDALAFIQSFIPCRFQGMARAIFIEFTAFT*
Homology
[Close]
BLAST of CsGy3G023590 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPS---STLP----LFAR 60
           MWRR++SS LKS+ ++ S + P        S    +  ++HLS S   S++P    +F+R
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAP--------SCRHAVVESTHLSLSTRASSIPAYSSIFSR 60

Query: 61  HYASDSADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 106
              S +ADT +KK VEDVMPIATGHE+EEL+A LEG+ + DI+ P GPFGTK
Sbjct: 61  LIGSAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTK 104

[Close]
BLAST of CsGy3G023590 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-16
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 106
           +T   K VEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTK
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. NCBI nr
Match: XP_004151243.1 (cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >KGN58136.1 hypothetical protein Csa_017499 [Cucumis sativus])

HSP 1 Score: 202 bits (513), Expect = 1.99e-63
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. NCBI nr
Match: KAA0038130.1 (cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa])

HSP 1 Score: 190 bits (483), Expect = 7.25e-59
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQA RL AASHLSPSST+ LFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKK VEDVMPIATGHEREELEASLEGKDILDINHP+GPFGTK
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. NCBI nr
Match: XP_022998035.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 173 bits (438), Expect = 5.00e-52
Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSS LK+LKSLPSSSTPASAPLGCISQA RLAA+S +S SS++ LFARHYASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTPASAPLGCISQATRLAASSRVSHSSSVSLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKK  EDV+PI TGHEREELEASLEG+DILDINHP+GPFGTK
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. NCBI nr
Match: XP_038896495.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 172 bits (437), Expect = 7.09e-52
Identity = 90/105 (85.71%), Postives = 95/105 (90.48%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSS LKSLKSLPSSSTPASAPLG IS+A R AA SH+SPS  + LFA HYASDSA
Sbjct: 1   MWRRLLSSPLKSLKSLPSSSTPASAPLGYISKATRRAAVSHVSPSPAVSLFASHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKK VED+MPIATGHEREELEASLEGKDILDINHP+GPFGTK
Sbjct: 61  DTGLKKKVEDIMPIATGHEREELEASLEGKDILDINHPVGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. NCBI nr
Match: XP_022956147.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_022980065.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 171 bits (433), Expect = 2.78e-51
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RL AASH+SPS+ + LFAR+YASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
            TG+KK VEDVMPIATGHEREELEASLEGKDILDINHP+GPFGTK
Sbjct: 61  GTGVKK-VEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTK 104

[Close]
BLAST of CsGy3G023590 vs. ExPASy TrEMBL
Match: A0A0A0LDH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 9.62e-64
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. ExPASy TrEMBL
Match: A0A5A7T437 (Cytochrome c oxidase subunit 5b-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00500 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 3.51e-59
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQA RL AASHLSPSST+ LFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKK VEDVMPIATGHEREELEASLEGKDILDINHP+GPFGTK
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. ExPASy TrEMBL
Match: A0A6J1KBJ1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492804 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 2.42e-52
Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSS LK+LKSLPSSSTPASAPLGCISQA RLAA+S +S SS++ LFARHYASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTPASAPLGCISQATRLAASSRVSHSSSVSLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
           DTGLKK  EDV+PI TGHEREELEASLEG+DILDINHP+GPFGTK
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. ExPASy TrEMBL
Match: A0A6J1IV42 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479582 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 1.35e-51
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RL AASH+SPS+ + LFAR+YASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
            TG+KK VEDVMPIATGHEREELEASLEGKDILDINHP+GPFGTK
Sbjct: 61  GTGVKK-VEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTK 104

[Close]
BLAST of CsGy3G023590 vs. ExPASy TrEMBL
Match: A0A6J1GVI7 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457927 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 1.35e-51
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RL AASH+SPS+ + LFAR+YASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 105
            TG+KK VEDVMPIATGHEREELEASLEGKDILDINHP+GPFGTK
Sbjct: 61  GTGVKK-VEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTK 104

[Close]
BLAST of CsGy3G023590 vs. TAIR 10
Match: AT1G80230.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPS---STLP----LFAR 60
           MWRR++SS LKS+ ++ S + P        S    +  ++HLS S   S++P    +F+R
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAP--------SCRHAVVESTHLSLSTRASSIPAYSSIFSR 60

Query: 61  HYASDSADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 106
              S +ADT +KK VEDVMPIATGHE+EEL+A LEG+ + DI+ P GPFGTK
Sbjct: 61  LIGSAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTK 104

[Close]
BLAST of CsGy3G023590 vs. TAIR 10
Match: AT3G15640.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 6.7e-17
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 106
           +T   K VEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTK
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTK 105

[Close]
BLAST of CsGy3G023590 vs. TAIR 10
Match: AT3G15640.2 (Rubredoxin-like superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDS- 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTK 106
           +T   K VEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTK
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTK 104

The following BLAST results are available for this feature:
BLAST of CsGy3G023590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SSB85.0e-1748.21Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q9LW159.5e-1645.71Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
BLAST of CsGy3G023590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151243.11.99e-63100.00cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >KGN58136.1 h... [more]
KAA0038130.17.25e-5994.29cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochr... [more]
XP_022998035.15.00e-5284.76cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima][more]
XP_038896495.17.09e-5285.71cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida][more]
XP_022956147.12.78e-5185.71cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_0... [more]
BLAST of CsGy3G023590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH69.62e-64100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1[more]
A0A5A7T4373.51e-5994.29Cytochrome c oxidase subunit 5b-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1KBJ12.42e-5284.76cytochrome c oxidase subunit 5b-2, mitochondrial-like OS=Cucurbita maxima OX=366... [more]
A0A6J1IV421.35e-5185.71cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=366... [more]
A0A6J1GVI71.35e-5185.71cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3... [more]
BLAST of CsGy3G023590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G80230.13.6e-1848.21Rubredoxin-like superfamily protein [more]
AT3G15640.16.7e-1745.71Rubredoxin-like superfamily protein [more]
AT3G15640.21.7e-1545.71Rubredoxin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3D2.60.11.10Cytochrome c oxidase, subunit Vbcoord: 64..107
e-value: 1.1E-5
score: 27.3
NoneNo IPR availablePANTHERPTHR10122:SF14CYTOCHROME C OXIDASE SUBUNIT 5Bcoord: 1..106
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 64..105
IPR002124Cytochrome c oxidase, subunit VbPANTHERPTHR10122CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIALcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G023590.2CsGy3G023590.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
cellular_component GO:0005740 mitochondrial envelope