CsGy3G023230 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G023230
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGlycosyltransferase
LocationGy14Chr3: 22868960 .. 22869402 (+)
RNA-Seq ExpressionCsGy3G023230
SyntenyCsGy3G023230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAGCGGCATTGGAGGTTTTTGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGGTATCGTTCAGCTCCATAAGACCTAATTGCCGACTAACATCGCGGAAGCAAATGGTGAAGATGGTTGGTCGATTTTTCAAAATCTGTCTATTTTAGAAACTTGCATGTTTTTACTGTAGCTAAAATTGAGCAATAATTTAAAAAATTTGGTAGATTTCTACCTAATGATGTGTATTTATTAGGTCTTGGAGGCCCTCGCTTTTGATTATTTGTTTGGATTGGCTCACATGGATGGTTCTTGATGCATTTGTTGGTGGTGCCATGAATAGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAAGGGACGGTTTGGTTCTCATA

mRNA sequence

ATGTTTAGCGGCATTGGAGGTTTTTGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGGTATCGTTCAGCTCCATAAGACCTAATTGCCGACTAACATCGCGGAAGCAAATGGTGAAGATGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAAGGGACGGTTTGGTTCTCATA

Coding sequence (CDS)

ATGTTTAGCGGCATTGGAGGTTTTTGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGGTATCGTTCAGCTCCATAAGACCTAATTGCCGACTAACATCGCGGAAGCAAATGGTGAAGATGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAAGGGACGGTTTGGTTCTCATA

Protein sequence

MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKMEGKEGEVVTSQMLLRDGLVLI
Homology
[Close]
BLAST of CsGy3G023230 vs. NCBI nr
Match: KAE8650384.1 (hypothetical protein Csa_010361 [Cucumis sativus])

HSP 1 Score: 149 bits (377), Expect = 3.25e-44
Identity = 73/79 (92.41%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 1   MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKMEG 60
           MFS IGGF LACYVSLWLNLPHWNVVAHDFLC ILKKVSFSSI+PNCRLTS KQMVKMEG
Sbjct: 63  MFSDIGGFGLACYVSLWLNLPHWNVVAHDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEG 122

Query: 61  KEGEVVTSQMLLRDGLVLI 79
           KEGEVVTSQMLL DGLVLI
Sbjct: 123 KEGEVVTSQMLLGDGLVLI 141

[Close]
BLAST of CsGy3G023230 vs. NCBI nr
Match: KAE8652785.1 (hypothetical protein Csa_022736, partial [Cucumis sativus])

HSP 1 Score: 145 bits (367), Expect = 2.33e-43
Identity = 73/79 (92.41%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 1  MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKMEG 60
          MFSGIGGF LACYVSLWLNLPH NVVAHDFLC ILKKVSFSSIRPNCRLTS+KQMVKMEG
Sbjct: 14 MFSGIGGFGLACYVSLWLNLPHRNVVAHDFLCHILKKVSFSSIRPNCRLTSQKQMVKMEG 73

Query: 61 KEGEVVTSQMLLRDGLVLI 79
          KEGEVVTSQMLL D LVLI
Sbjct: 74 KEGEVVTSQMLLGDDLVLI 92

[Close]
BLAST of CsGy3G023230 vs. NCBI nr
Match: KAE8650744.1 (hypothetical protein Csa_017593, partial [Cucumis sativus])

HSP 1 Score: 126 bits (316), Expect = 3.53e-36
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 1  MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58
          MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM
Sbjct: 1  MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58

[Close]
BLAST of CsGy3G023230 vs. NCBI nr
Match: KGN44263.2 (hypothetical protein Csa_015473, partial [Cucumis sativus])

HSP 1 Score: 120 bits (302), Expect = 4.84e-34
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0 

Query: 1  MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58
          MFSGIGGFCLACYVSLWLNLPH NVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM
Sbjct: 1  MFSGIGGFCLACYVSLWLNLPHRNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58

[Close]
BLAST of CsGy3G023230 vs. NCBI nr
Match: KAE8650740.1 (hypothetical protein Csa_023414, partial [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 9.76e-34
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0 

Query: 1  MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58
          MFSGIGGFC+ACYVSLWLNLPH NVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM
Sbjct: 1  MFSGIGGFCVACYVSLWLNLPHQNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58

[Close]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match: A0A0A0L7V2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152650 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 6.53e-29
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 1   MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58
           MFS IGGF LACYVSLWLNLPH NVVAHDFLC ILKKVSFSSIRPNCRLTSRKQMVKM
Sbjct: 63  MFSDIGGFGLACYVSLWLNLPHRNVVAHDFLCHILKKVSFSSIRPNCRLTSRKQMVKM 120

[Close]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match: A0A0A0LC60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608710 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.73e-11
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 5  IGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVS 39
          +GGF LACYVSL LNLPH NVVAHDFLCQILKKVS
Sbjct: 1  MGGFGLACYVSLGLNLPHRNVVAHDFLCQILKKVS 35

[Close]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match: A0A5A7TH54 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00320 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.70e-08
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 1   MFSGIGGFCLACYVSLWLNLPHWNVVAHDF 30
           +FSG GGF LACYVSLWLNLPH NVVAHDF
Sbjct: 146 IFSGTGGFGLACYVSLWLNLPHRNVVAHDF 175

[Close]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match: A0A5D3BC30 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001310 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.70e-08
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 1   MFSGIGGFCLACYVSLWLNLPHWNVVAHDF 30
           +FSG GGF LACYVSLWLNLPH NVVAHDF
Sbjct: 146 IFSGTGGFGLACYVSLWLNLPHRNVVAHDF 175

[Close]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match: A0A1S3BMQ5 (Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103491535 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.70e-08
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 1   MFSGIGGFCLACYVSLWLNLPHWNVVAHDF 30
           +FSG GGF LACYVSLWLNLPH NVVAHDF
Sbjct: 146 IFSGTGGFGLACYVSLWLNLPHRNVVAHDF 175

The following BLAST results are available for this feature:
BLAST of CsGy3G023230 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G023230 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650384.13.25e-4492.41hypothetical protein Csa_010361 [Cucumis sativus][more]
KAE8652785.12.33e-4392.41hypothetical protein Csa_022736, partial [Cucumis sativus][more]
KAE8650744.13.53e-36100.00hypothetical protein Csa_017593, partial [Cucumis sativus][more]
KGN44263.24.84e-3498.28hypothetical protein Csa_015473, partial [Cucumis sativus][more]
KAE8650740.19.76e-3496.55hypothetical protein Csa_023414, partial [Cucumis sativus][more]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7V26.53e-2993.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152650 PE=4 SV=1[more]
A0A0A0LC601.73e-1188.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608710 PE=4 SV=1[more]
A0A5A7TH542.70e-0886.67Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G... [more]
A0A5D3BC302.70e-0886.67Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G... [more]
A0A1S3BMQ52.70e-0886.67Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103491535 PE=3 SV=1[more]
BLAST of CsGy3G023230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G023230.2CsGy3G023230.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0071555 cell wall organization
biological_process GO:0008360 regulation of cell shape
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity