CsGy3G022880 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G022880
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein transport protein SEC13-like protein B
LocationGy14Chr3: 21699791 .. 21702895 (-)
RNA-Seq ExpressionCsGy3G022880
SyntenyCsGy3G022880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGGCACAAACTTGGAACTCAATTTCTGTAACTTCTTCTTCTTCCATCCTTCGGATCGCTCCAGTAGAATTCCATCCAATCGCCTCTACAATCCTCGTGGTATCGATGCTTCCCTGCATTTCCATCTTTATTGCAATCACTCTCATTACTCAATATTTTCTTGTTATTCATTTTTATTTGTTGAATTCATGCATGTTTTTCGTGTAATTTTCTGCAATATGGTTTCCTCACGATCAAATTTTTTTTCTTCTTGAAGGTCTCATTGATTTTAGCTGGTTAATTTGTTGATTTGTCCCCGTTTTGTTTGTATGATCATAAAACTTGAAATTAGGGCTTAGTGTTATAATTGGATCTGATCTAGTTAAAATGATGGTGAATGCTACGTTCATGAACTTTTCTTTTGGTTTGGTTGGCTGGGTTCCCATTCCCACCCGTGAGTAGTTTGTTGATTAAATTGGCTATAATTTAAGCTTGTGATTTAACGTCCTCTTGTTTTAGTTTTACCAATGTGTTGCAACATTAAGTGAGGAGAGATTCTTCGTTTAGTATCAGAAATCAGACTTTTTATGTTTGTTTTGATGACAACAATTCCGAACTATTCTTTACTAGAATTTTGCCTTCCTAAGAAACTAAGTTCTATATCTTGTACCTGGACTTCCAAATAAAATTGGCCACGGTACCTTTTTGCGAAAGGCTGAACAGTGAACACTTTCCACAAAATTTAGAATAGTTTAGAAATGATACCTGAACGTCCTCGTTGGTGCTTTCTGTGTAGGGAAGTAGGGGAAAACTTTGAACGTGTTTTCTTTAATGACCATTTTTTTAGCAGAATACGGTGTTTTGAACTTCTTATATTAGGTTGTTTAGCACTCGAAACATCCTAGATTTCCTTTTGTATCTCTTGACTAGTCTCTGTTTAGTTGGTCAAGCTTAGATTTCGTTGCTAAATATACCTTGAACAAATTATTGGGACAACTGGCTGGAAAGGTTGCAATCTGAAGTGGATCTGGCATGAGATGTTCTCTTTTTGTCTTTGCTTCTTGACTGTATACATTTTCTACTATGCTATTTCTTATCCTAAAAATGAAGAGTTCTGTGGAACCGTACATGCGCTGTTTTCATTTGTGATCATTTTTTTTTTTTTTTTGCTATTTCTTATCTGTAGAAAAAAGAGAAGTGTGTTGTTGAATCATGCATCCTCTATTTCCTTCTTGAGTATTGTACTTTTGCTGTTTCTAATGTGCTGTTACTTATCCTTAAAAGAAAGTAGAGTTTGGTGAAATTGTGCTTGCTTTGTTCTGTTCTTGATTTGAACATTTTCTATTTTCTATTTTGTTATTTCTTATCCAAAAGATGAAGAGTTTTGTAGACTTGGGCTTAATCTATTTTTTAATTTTAGTTTACTAGTTATTATGTCCTCATTTTGGGCTGTTCAACATTTTGGCGAGTAATGCACTCTTGTGTAGGAGTCAGCTTGTATACTGTAACTTTTAGCTTCTTCATCCATTTTTCTTTTGAGCTTTGTTTATTAAGCTGCATTATCCCGAGACAGTTTTTTTCTTATTATACCATTTTTTTCTATTATACAATTTTTACAATGTTTTATTAATGGCTAAAATATACGAGATGTGGAAATCAAACTGTAGGAAGGATAAAAAAATAGGTCATATGGGAGGACTTTTCTTGCTGACATTGAATTGCGATAACCCATAGGCTATGGGCCATAGCTTAAGATTATATTGATGTATAGAATGAAAGATAACTTTAGAAGTTTCCCTTTAATGTTTATGAAACATATCATCTTTTAAGATGTGGCTTTTCCACAGAGATCAACGAGGAAAATTGAGTACCAATTATAGTTCCTATTACTCATTGGTGGAATTAGTTGTCAGAGAAGATGCCTGGTCAAAAGATTGAAACTGGTCATCAAGACACTATTCATGATGTTGCGATGGATTATTATGGTAAGCGTGTTGCATCAGCTTCATCTGACCAAACTATCAAGATCACTGGTGTAAGCAACTCAGCCACTCAGCATCTTGCAACGCTTACCGGTCACCAAGGACCTGTATGGCAGGTTGCCTGGGCACACCCAAAATTTGGTCCCTTGCTTGCTTCATGTTCTTATGATGGTCGTGTGATAATATGGAAGGAAGGCAATCAAAATGAGTGGTCGCAAGCCCATATTTTCGATGATCATAAATCATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTTTGTTTGGCATGTGGTTCATCTGATGGCAATATCTCTGTATTCACTGCAAGAGCAGACGGTGGTTGGGACACCTCTAGGATCGATCAAGCTCACCCAGTTGGAGTCACATCTGTTTCATGGGCTCCATCTACCACACCGGGTGCTCTTGTTGGCTCCGCTTTACTCGATCCTGTTCAGAAGCTATGCTCAGGCGGTTGCGACAATACAGTGAAGGTGTGGAAGCTGTACAATGGAGTTTGGAAGATGGATTGCTTCCCAGCTCTCCAAATGCACAGTGATTGGGTTAGAGATGTTTCATGGGCTCCTAACCTTGGTTTGCCGAAATCAACAATTGCAAGTGCGTCTCAAGACGGGAAAGTTGTTATCTGGACCGTTGTGAAAGAAGGAGATCAATGGGAAGGTAAGGTTCTAAAGGACTTTAAAACCCCTGTTTGGAGGGTATCATGGTCGTTAACGGGCAATATCCTGGCCGTGGCTGATGGAAATAACAATGTTTCATTATGGAAAGAAGCAGTGGATGGTGATTGGCAGCAGGTTTCAACTGTTGAACCTTAATGTCCTCTTTTTTACTTCTTTTCGTAACACATTTTGGTATACTTTACACAATTTTAACTCTGTAAGACATCAAAATTACCAAGAGATCTAGAGAGCTTTGGACTATTTTAACTTCTTGTTTGTTGTCACAGCTACTTTTATCTTTTGCGTCTATTGAGTTTGATGAATTCTATTTTCTATCACACTCCAACTTACACCATTCACAATGAGATGGTGGATCGTTAATTCAACATTATGTGTCAACCCATAATTCATATTATTTCAGTAAGTATTTAAAAGGTTTAAATATTATTTTGGTTCC

mRNA sequence

ACTGGCACAAACTTGGAACTCAATTTCTGTAACTTCTTCTTCTTCCATCCTTCGGATCGCTCCAGTAGAATTCCATCCAATCGCCTCTACAATCCTCGTGAGATCAACGAGGAAAATTGAGTACCAATTATAGTTCCTATTACTCATTGGTGGAATTAGTTGTCAGAGAAGATGCCTGGTCAAAAGATTGAAACTGGTCATCAAGACACTATTCATGATGTTGCGATGGATTATTATGGTAAGCGTGTTGCATCAGCTTCATCTGACCAAACTATCAAGATCACTGGTGTAAGCAACTCAGCCACTCAGCATCTTGCAACGCTTACCGGTCACCAAGGACCTGTATGGCAGGTTGCCTGGGCACACCCAAAATTTGGTCCCTTGCTTGCTTCATGTTCTTATGATGGTCGTGTGATAATATGGAAGGAAGGCAATCAAAATGAGTGGTCGCAAGCCCATATTTTCGATGATCATAAATCATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTTTGTTTGGCATGTGGTTCATCTGATGGCAATATCTCTGTATTCACTGCAAGAGCAGACGGTGGTTGGGACACCTCTAGGATCGATCAAGCTCACCCAGTTGGAGTCACATCTGTTTCATGGGCTCCATCTACCACACCGGGTGCTCTTGTTGGCTCCGCTTTACTCGATCCTGTTCAGAAGCTATGCTCAGGCGGTTGCGACAATACAGTGAAGGTGTGGAAGCTGTACAATGGAGTTTGGAAGATGGATTGCTTCCCAGCTCTCCAAATGCACAGTGATTGGGTTAGAGATGTTTCATGGGCTCCTAACCTTGGTTTGCCGAAATCAACAATTGCAAGTGCGTCTCAAGACGGGAAAGTTGTTATCTGGACCGTTGTGAAAGAAGGAGATCAATGGGAAGGTAAGGTTCTAAAGGACTTTAAAACCCCTGTTTGGAGGGTATCATGGTCGTTAACGGGCAATATCCTGGCCGTGGCTGATGGAAATAACAATGTTTCATTATGGAAAGAAGCAGTGGATGGTGATTGGCAGCAGGTTTCAACTGTTGAACCTTAATGTCCTCTTTTTTACTTCTTTTCGTAACACATTTTGGTATACTTTACACAATTTTAACTCTGTAAGACATCAAAATTACCAAGAGATCTAGAGAGCTTTGGACTATTTTAACTTCTTGTTTGTTGTCACAGCTACTTTTATCTTTTGCGTCTATTGAGTTTGATGAATTCTATTTTCTATCACACTCCAACTTACACCATTCACAATGAGATGGTGGATCGTTAATTCAACATTATGTGTCAACCCATAATTCATATTATTTCAGTAAGTATTTAAAAGGTTTAAATATTATTTTGGTTCC

Coding sequence (CDS)

ATGCCTGGTCAAAAGATTGAAACTGGTCATCAAGACACTATTCATGATGTTGCGATGGATTATTATGGTAAGCGTGTTGCATCAGCTTCATCTGACCAAACTATCAAGATCACTGGTGTAAGCAACTCAGCCACTCAGCATCTTGCAACGCTTACCGGTCACCAAGGACCTGTATGGCAGGTTGCCTGGGCACACCCAAAATTTGGTCCCTTGCTTGCTTCATGTTCTTATGATGGTCGTGTGATAATATGGAAGGAAGGCAATCAAAATGAGTGGTCGCAAGCCCATATTTTCGATGATCATAAATCATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTTTGTTTGGCATGTGGTTCATCTGATGGCAATATCTCTGTATTCACTGCAAGAGCAGACGGTGGTTGGGACACCTCTAGGATCGATCAAGCTCACCCAGTTGGAGTCACATCTGTTTCATGGGCTCCATCTACCACACCGGGTGCTCTTGTTGGCTCCGCTTTACTCGATCCTGTTCAGAAGCTATGCTCAGGCGGTTGCGACAATACAGTGAAGGTGTGGAAGCTGTACAATGGAGTTTGGAAGATGGATTGCTTCCCAGCTCTCCAAATGCACAGTGATTGGGTTAGAGATGTTTCATGGGCTCCTAACCTTGGTTTGCCGAAATCAACAATTGCAAGTGCGTCTCAAGACGGGAAAGTTGTTATCTGGACCGTTGTGAAAGAAGGAGATCAATGGGAAGGTAAGGTTCTAAAGGACTTTAAAACCCCTGTTTGGAGGGTATCATGGTCGTTAACGGGCAATATCCTGGCCGTGGCTGATGGAAATAACAATGTTTCATTATGGAAAGAAGCAGTGGATGGTGATTGGCAGCAGGTTTCAACTGTTGAACCTTAA

Protein sequence

MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQVAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCSGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIWTVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVEP*
Homology
[Close]
BLAST of CsGy3G022880 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 2.7e-158
Identity = 251/302 (83.11%), Postives = 280/302 (92.72%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHQGPVW 60
           MPGQKIETGH+D +HDV MDYYGKR+A+ASSD TIKITGVSN+  +Q LATLTGH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCL 120
           +VAWAHPK+G +LASCSYDG+VI+WKEGNQN+W+Q H+F DHKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLC 180
           ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP+T PGALV S LLDPV KL 
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCDNTVKVWKL NG WKMDCFPALQ H+DWVRDV+WAPNLGLPKSTIAS SQDGKV+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WTV KEG+QWEGKVLKDF TPVWRVSWSLTGN+LAV+DGNNNV++WKEAVDG+W+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

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BLAST of CsGy3G022880 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 7.2e-156
Identity = 246/302 (81.46%), Postives = 278/302 (92.05%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHQGPVW 60
           MP QKIETGH DTIHDV MDYYGKRVA+ASSD TIKITGVSNS  +QHLATLTGH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCL 120
           QVAWAHPKFG LLASCSYDG++I+WKEGNQN+W+QAH+F DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLC 180
           ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV S ++DPV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WKMDCFPAL  H+DWVRDV+WAPNLGLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WT+ KEG+QWEG VLKDFKTPVWRVSWSLTGN+LAV+DGNNNV++WKE+VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]
BLAST of CsGy3G022880 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 343.2 bits (879), Expect = 3.0e-93
Identity = 159/299 (53.18%), Postives = 206/299 (68.90%), Query Frame = 0 

Query: 6   IETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQVAWAH 65
           ++T H+D IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH+GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67

Query: 66  PKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLACGSSD 125
           P +G +LASCSYD +VIIWKE N   W + H    H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALV---GSALLDPVQKLCSGG 185
           G IS+ T   +G W+  +I+ AH +G  +VSWAP+  PG+L+        + ++K  SGG
Sbjct: 128 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIWT 245
           CDN +K+W+   +G WK +    L+ HSDWVRDV+WAP++GLP STIAS SQDG+V IWT
Sbjct: 188 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 247

Query: 246 V-VKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE+VDG W  +S V
Sbjct: 248 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]
BLAST of CsGy3G022880 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.0e-93
Identity = 159/299 (53.18%), Postives = 206/299 (68.90%), Query Frame = 0 

Query: 6   IETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQVAWAH 65
           ++T H+D IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH+GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67

Query: 66  PKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLACGSSD 125
           P +G +LASCSYD +VIIWKE N   W + H    H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALV---GSALLDPVQKLCSGG 185
           G IS+ T   +G W+  +I+ AH +G  +VSWAP+  PG+L+        + ++K  SGG
Sbjct: 128 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIWT 245
           CDN +K+W+   +G WK +    L+ HSDWVRDV+WAP++GLP STIAS SQDG+V IWT
Sbjct: 188 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 247

Query: 246 V-VKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE+VDG W  +S V
Sbjct: 248 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]
BLAST of CsGy3G022880 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.9e-92
Identity = 159/299 (53.18%), Postives = 205/299 (68.56%), Query Frame = 0 

Query: 6   IETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQVAWAH 65
           ++T H+D IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH+GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAH 67

Query: 66  PKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLACGSSD 125
           P +G +LASCSYD +VIIWKE N   W + H    H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALV---GSALLDPVQKLCSGG 185
           G IS+ T    G W+  +I+ AH +G  +VSWAP+  PG+L+        + ++K  SGG
Sbjct: 128 GAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIWT 245
           CDN +K+WK   +G WK +    L+ HSDWVRDV+WAP++GLP STIAS SQDG+V +WT
Sbjct: 188 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWT 247

Query: 246 V-VKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE+VDG W  +S V
Sbjct: 248 CDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]
BLAST of CsGy3G022880 vs. NCBI nr
Match: XP_004150601.1 (protein transport protein SEC13 homolog B [Cucumis sativus] >KGN58046.1 hypothetical protein Csa_009624 [Cucumis sativus])

HSP 1 Score: 644 bits (1662), Expect = 7.12e-234
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]
BLAST of CsGy3G022880 vs. NCBI nr
Match: XP_016900431.1 (PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >XP_016900432.1 PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >XP_016900433.1 PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >KAA0050817.1 protein transport protein SEC13-like protein B [Cucumis melo var. makuwa] >TYK08528.1 protein transport protein SEC13-like protein B [Cucumis melo var. makuwa])

HSP 1 Score: 642 bits (1656), Expect = 5.85e-233
Identity = 299/301 (99.34%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

[Close]
BLAST of CsGy3G022880 vs. NCBI nr
Match: XP_038878202.1 (protein transport protein SEC13 homolog B-like isoform X2 [Benincasa hispida] >XP_038878203.1 protein transport protein SEC13 homolog B-like isoform X2 [Benincasa hispida])

HSP 1 Score: 634 bits (1634), Expect = 1.54e-229
Identity = 294/301 (97.67%), Postives = 298/301 (99.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIE GHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSA QHLATLTGHQGPVWQ
Sbjct: 5   MPGQKIENGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSAKQHLATLTGHQGPVWQ 64

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 65  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 124

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRI QAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 125 CGSSDGNISVFTARADGGWDTSRIVQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 184

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 185 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 244

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TV+KEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNV+LWKEAVDGDWQQVST+E
Sbjct: 245 TVIKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVSTIE 304

[Close]
BLAST of CsGy3G022880 vs. NCBI nr
Match: XP_038878201.1 (protein transport protein SEC13 homolog B-like isoform X1 [Benincasa hispida])

HSP 1 Score: 634 bits (1634), Expect = 3.37e-229
Identity = 294/301 (97.67%), Postives = 298/301 (99.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIE GHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSA QHLATLTGHQGPVWQ
Sbjct: 26  MPGQKIENGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSAKQHLATLTGHQGPVWQ 85

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 86  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 145

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRI QAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 146 CGSSDGNISVFTARADGGWDTSRIVQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 205

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 206 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 265

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TV+KEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNV+LWKEAVDGDWQQVST+E
Sbjct: 266 TVIKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVSTIE 325

[Close]
BLAST of CsGy3G022880 vs. NCBI nr
Match: XP_023528381.1 (protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_023528382.1 protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_023528383.1 protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 631 bits (1628), Expect = 1.09e-228
Identity = 294/301 (97.67%), Postives = 297/301 (98.67%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]
BLAST of CsGy3G022880 vs. ExPASy TrEMBL
Match: A0A0A0LDB9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G462670 PE=3 SV=1)

HSP 1 Score: 644 bits (1662), Expect = 3.45e-234
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]
BLAST of CsGy3G022880 vs. ExPASy TrEMBL
Match: A0A1S4DWT1 (protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC103489960 PE=3 SV=1)

HSP 1 Score: 642 bits (1656), Expect = 2.83e-233
Identity = 299/301 (99.34%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

[Close]
BLAST of CsGy3G022880 vs. ExPASy TrEMBL
Match: A0A5D3CBF9 (Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00660 PE=3 SV=1)

HSP 1 Score: 642 bits (1656), Expect = 2.83e-233
Identity = 299/301 (99.34%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

[Close]
BLAST of CsGy3G022880 vs. ExPASy TrEMBL
Match: A0A6J1IY63 (protein transport protein SEC13 homolog B OS=Cucurbita maxima OX=3661 GN=LOC111479584 PE=3 SV=1)

HSP 1 Score: 629 bits (1622), Expect = 4.33e-228
Identity = 293/301 (97.34%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVD DWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDSDWQQVSTVE 300

[Close]
BLAST of CsGy3G022880 vs. ExPASy TrEMBL
Match: A0A6J1GWL3 (protein transport protein SEC13 homolog B OS=Cucurbita moschata OX=3662 GN=LOC111457822 PE=3 SV=1)

HSP 1 Score: 628 bits (1620), Expect = 8.74e-228
Identity = 293/301 (97.34%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGSALLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWA NLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWASNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]
BLAST of CsGy3G022880 vs. TAIR 10
Match: AT2G30050.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-159
Identity = 251/302 (83.11%), Postives = 280/302 (92.72%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHQGPVW 60
           MPGQKIETGH+D +HDV MDYYGKR+A+ASSD TIKITGVSN+  +Q LATLTGH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCL 120
           +VAWAHPK+G +LASCSYDG+VI+WKEGNQN+W+Q H+F DHKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLC 180
           ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP+T PGALV S LLDPV KL 
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCDNTVKVWKL NG WKMDCFPALQ H+DWVRDV+WAPNLGLPKSTIAS SQDGKV+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WTV KEG+QWEGKVLKDF TPVWRVSWSLTGN+LAV+DGNNNV++WKEAVDG+W+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]
BLAST of CsGy3G022880 vs. TAIR 10
Match: AT3G01340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 551.2 bits (1419), Expect = 5.1e-157
Identity = 246/302 (81.46%), Postives = 278/302 (92.05%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHQGPVW 60
           MP QKIETGH DTIHDV MDYYGKRVA+ASSD TIKITGVSNS  +QHLATLTGH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCL 120
           QVAWAHPKFG LLASCSYDG++I+WKEGNQN+W+QAH+F DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLC 180
           ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV S ++DPV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WKMDCFPAL  H+DWVRDV+WAPNLGLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WT+ KEG+QWEG VLKDFKTPVWRVSWSLTGN+LAV+DGNNNV++WKE+VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]
BLAST of CsGy3G022880 vs. TAIR 10
Match: AT3G01340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 551.2 bits (1419), Expect = 5.1e-157
Identity = 246/302 (81.46%), Postives = 278/302 (92.05%), Query Frame = 0 

Query: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHQGPVW 60
           MP QKIETGH DTIHDV MDYYGKRVA+ASSD TIKITGVSNS  +QHLATLTGH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCL 120
           QVAWAHPKFG LLASCSYDG++I+WKEGNQN+W+QAH+F DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLC 180
           ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV S ++DPV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WKMDCFPAL  H+DWVRDV+WAPNLGLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WT+ KEG+QWEG VLKDFKTPVWRVSWSLTGN+LAV+DGNNNV++WKE+VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]
BLAST of CsGy3G022880 vs. TAIR 10
Match: AT2G26060.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-17
Identity = 66/247 (26.72%), Postives = 107/247 (43.32%), Query Frame = 0 

Query: 51  LTGHQGPVWQVAW----AHPK-FGPLLASCSYDGRVIIWKEGN-QNEWSQAHIFDD-HKS 110
           L GH   VW VAW    +H     P+LASCS D  V IW++ +    W+   + ++ H  
Sbjct: 16  LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75

Query: 111 SVNSIAWAPHEVGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTP 170
           +V S AW+P   G  LA  S DG   ++       ++     + H   V SVSW  S   
Sbjct: 76  TVRSCAWSPS--GQLLATASFDGTTGIW-KNYGSEFECISTLEGHENEVKSVSWNAS--- 135

Query: 171 GALVGSALLDPVQKLCSGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGL 230
               GS L       CS   D +V +W++  G  + DC   L  H+  V+ V W P +  
Sbjct: 136 ----GSCL-----ATCSR--DKSVWIWEVLEGN-EYDCAAVLTGHTQDVKMVQWHPTM-- 195

Query: 231 PKSTIASASQDGKVVIWTVVKEGDQWE-----GKVLKDFKTPVWRVSWSLTGNILAVADG 286
               + S S D  + +W    +  +++     G+      + VW +S++  G+ +     
Sbjct: 196 --DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSD 240

[Close]
BLAST of CsGy3G022880 vs. TAIR 10
Match: AT2G26060.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-17
Identity = 66/247 (26.72%), Postives = 107/247 (43.32%), Query Frame = 0 

Query: 51  LTGHQGPVWQVAW----AHPK-FGPLLASCSYDGRVIIWKEGN-QNEWSQAHIFDD-HKS 110
           L GH   VW VAW    +H     P+LASCS D  V IW++ +    W+   + ++ H  
Sbjct: 16  LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75

Query: 111 SVNSIAWAPHEVGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTP 170
           +V S AW+P   G  LA  S DG   ++       ++     + H   V SVSW  S   
Sbjct: 76  TVRSCAWSPS--GQLLATASFDGTTGIW-KNYGSEFECISTLEGHENEVKSVSWNAS--- 135

Query: 171 GALVGSALLDPVQKLCSGGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGL 230
               GS L       CS   D +V +W++  G  + DC   L  H+  V+ V W P +  
Sbjct: 136 ----GSCL-----ATCSR--DKSVWIWEVLEGN-EYDCAAVLTGHTQDVKMVQWHPTM-- 195

Query: 231 PKSTIASASQDGKVVIWTVVKEGDQWE-----GKVLKDFKTPVWRVSWSLTGNILAVADG 286
               + S S D  + +W    +  +++     G+      + VW +S++  G+ +     
Sbjct: 196 --DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSD 240

The following BLAST results are available for this feature:
BLAST of CsGy3G022880 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O647402.7e-15883.11Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC... [more]
Q9SRI17.2e-15681.46Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC... [more]
Q9D1M03.0e-9353.18Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3[more]
Q5XFW83.0e-9353.18Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1[more]
Q3ZCC91.9e-9253.18Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1[more]
BLAST of CsGy3G022880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150601.17.12e-234100.00protein transport protein SEC13 homolog B [Cucumis sativus] >KGN58046.1 hypothet... [more]
XP_016900431.15.85e-23399.34PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >XP_01690043... [more]
XP_038878202.11.54e-22997.67protein transport protein SEC13 homolog B-like isoform X2 [Benincasa hispida] >X... [more]
XP_038878201.13.37e-22997.67protein transport protein SEC13 homolog B-like isoform X1 [Benincasa hispida][more]
XP_023528381.11.09e-22897.67protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_02352... [more]
BLAST of CsGy3G022880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDB93.45e-234100.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G... [more]
A0A1S4DWT12.83e-23399.34protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC10348996... [more]
A0A5D3CBF92.83e-23399.34Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1IY634.33e-22897.34protein transport protein SEC13 homolog B OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1GWL38.74e-22897.34protein transport protein SEC13 homolog B OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
BLAST of CsGy3G022880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G30050.11.9e-15983.11transducin family protein / WD-40 repeat family protein [more]
AT3G01340.15.1e-15781.46Transducin/WD40 repeat-like superfamily protein [more]
AT3G01340.25.1e-15781.46Transducin/WD40 repeat-like superfamily protein [more]
AT2G26060.14.7e-1726.72Transducin/WD40 repeat-like superfamily protein [more]
AT2G26060.24.7e-1726.72Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 178..192
score: 38.48
coord: 72..86
score: 35.5
coord: 228..242
score: 32.33
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 2..39
e-value: 0.56
score: 18.6
coord: 138..191
e-value: 0.021
score: 24.0
coord: 91..132
e-value: 1.1E-4
score: 31.5
coord: 198..241
e-value: 0.0013
score: 28.0
coord: 44..85
e-value: 2.0E-7
score: 40.7
coord: 247..286
e-value: 0.05
score: 22.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 8..37
e-value: 0.0073
score: 17.1
coord: 146..191
e-value: 0.028
score: 15.3
coord: 206..240
e-value: 0.051
score: 14.5
coord: 46..85
e-value: 1.4E-5
score: 25.7
coord: 94..131
e-value: 0.023
score: 15.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 205..242
score: 10.675542
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 51..85
score: 10.107432
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..301
e-value: 1.7E-98
score: 331.5
IPR037363Sec13/Seh1 familyPANTHERPTHR11024NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERcoord: 1..300
NoneNo IPR availablePANTHERPTHR11024:SF16PROTEIN TRANSPORT PROTEIN SEC13 HOMOLOG B-LIKEcoord: 1..300
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 205..242
score: 8.966513
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 51..85
score: 8.518333
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 8..286

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G022880.2CsGy3G022880.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090114 COPII-coated vesicle budding
biological_process GO:0006606 protein import into nucleus
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0031080 nuclear pore outer ring
molecular_function GO:0005515 protein binding
molecular_function GO:0005198 structural molecule activity