CsGy3G022570 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G022570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein MNN4-like
Location	Gy14Chr3: 21233623 .. 21234267 (+)
RNA-Seq Expression	CsGy3G022570
Synteny	CsGy3G022570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTAATGAATACCTTCAACATCAATGGTAAGAAGATAGCTATGACTAATGAAACTATAGGAACAATGCTTAACCTACTCCTTGATATGAACAATAAAAGAGGCAGGAGAGAAGAAACATAAAGAAAATGAGGAAAGAACAAGCAGAAAGGGAGTAGATAAAGAAGAGGAAAAGAAGAAGGAAACAGATAAAAGAGTAGAAGAGGATGAAGAGGATAAAGTAGGCAAAGAGGAAGAAGAGGAAAATGAAAGAGAGCATGAAAAGGAACCGTTTTTGCCCATTGCTGAAACTGAGTTTGGAAGGTTGGTAAAGGAAGCCCAGAAACGGAGCGAAAAAGTTAAGTTTGGGCTCCTAAAGATTAAGGATCAGGCCAAAGGCTTGAAGGCCTTGACGGAGAAAAAGTGCCAAAAGGAAGTTGAGAGAGTATGAAGAGCTCCTCAACAAGACTGAAAAAATTGGCTCTCTCCACATAGAAAAGCAAATGAAAGGAGAAGCCCATCGAAGAGTTCTGCAAGGAGTTCAAGAAAGAAGTAAATGAGACAAGTCCTTTAGAGGACAATGTTGGTGAGGAACAACCAACGAAGAAGAAGGCGTCAGAAGAACAGGACGTGAAGAAAAGACTTAAGAAAGAAAAGGCTTAG

mRNA sequence

ATGGGATTAATGAATACCTTCAACATCAATGAGGCAGGAGAGAAGAAACATAAAGAAAATGAGGAAAGAACAAGCAGAAAGGGAGTAGATAAAGAAGAGGAAAAGAAGAAGGAAACAGATAAAAGAGTAGAAGAGGATGAAGAGGATAAAGTAGGCAAAGAGGAAGAAGAGGAAAATGAAAGAGAGCATGAAAAGGAACCGTTTTTGCCCATTGCTGAAACTGAGTTTGGAAGGTTGGTAAAGGAAGCCCAGAAACGGAGCGAAAAAGTTAAGTTTGGGCTCCTAAAGATTAAGGATCAGGCCAAAGGCTTGAAGGCCTTGACGGAGAAAAAGTGCCAAAAGGAAGTTGAGAGAGAGTTCAAGAAAGAAGTAAATGAGACAAGTCCTTTAGAGGACAATGTTGGTGAGGAACAACCAACGAAGAAGAAGGCGTCAGAAGAACAGGACGTGAAGAAAAGACTTAAGAAAGAAAAGGCTTAG

Coding sequence (CDS)

ATGGGATTAATGAATACCTTCAACATCAATGAGGCAGGAGAGAAGAAACATAAAGAAAATGAGGAAAGAACAAGCAGAAAGGGAGTAGATAAAGAAGAGGAAAAGAAGAAGGAAACAGATAAAAGAGTAGAAGAGGATGAAGAGGATAAAGTAGGCAAAGAGGAAGAAGAGGAAAATGAAAGAGAGCATGAAAAGGAACCGTTTTTGCCCATTGCTGAAACTGAGTTTGGAAGGTTGGTAAAGGAAGCCCAGAAACGGAGCGAAAAAGTTAAGTTTGGGCTCCTAAAGATTAAGGATCAGGCCAAAGGCTTGAAGGCCTTGACGGAGAAAAAGTGCCAAAAGGAAGTTGAGAGAGAGTTCAAGAAAGAAGTAAATGAGACAAGTCCTTTAGAGGACAATGTTGGTGAGGAACAACCAACGAAGAAGAAGGCGTCAGAAGAACAGGACGTGAAGAAAAGACTTAAGAAAGAAAAGGCTTAG

Protein sequence

MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENEREHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREFKKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA*

Homology

[Close]

BLAST of CsGy3G022570 vs. NCBI nr
Match: KGN58010.1 (hypothetical protein Csa_010338 [Cucumis sativus])

HSP 1 Score: 270 bits (691), Expect = 1.45e-90
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENE 60
           MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENE
Sbjct: 1   MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENE 60

Query: 61  REHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREF 120
           REHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREF
Sbjct: 61  REHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREF 120

Query: 121 KKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA 159
           KKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA
Sbjct: 121 KKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA 159

[Close]

BLAST of CsGy3G022570 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.67e-11
Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 68  FLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQK------EVEREFK 127
            LPI E+EF ++ ++AQ+++EK+K  LLKIK +A+G+KAL E+K ++      E  +EF+
Sbjct: 6   LLPIVESEFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFE 65

Query: 128 KEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEK 158
           KE+ E SPLED V E+QP KK+  E QD  KR KK K
Sbjct: 66  KELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNK 102

[Close]

BLAST of CsGy3G022570 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 50.8 bits (120), Expect = 3.72e-04
Identity = 62/153 (40.52%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 11  EAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENEREH-EKEPFL 70
           E  +K  KE EE+  RK V    EKKK   K++EE    KV KEE+EE E E  E    +
Sbjct: 76  EKKDKLRKEEEEKKKRKEV----EKKK---KKIEE----KVHKEEQEEQEEEVCEISASM 135

Query: 71  PIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQ---------------- 130
           PIA+ +F R+ ++AQK  EKVK  LLKIK +A+G+KAL E+K +                
Sbjct: 136 PIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKL 195

Query: 131 -------KEVER-------EFKKEVNETSPLED 132
                  KE E+       EF+KE++E SPL+D
Sbjct: 196 ALSVENSKEKEKTFEEYCEEFEKEISELSPLKD 217

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BLAST of CsGy3G022570 vs. ExPASy TrEMBL
Match: A0A0A0L7X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G432430 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 7.04e-91
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENE 60
           MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENE
Sbjct: 1   MGLMNTFNINEAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENE 60

Query: 61  REHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREF 120
           REHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREF
Sbjct: 61  REHEKEPFLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQKEVEREF 120

Query: 121 KKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA 159
           KKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA
Sbjct: 121 KKEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEKA 159

[Close]

BLAST of CsGy3G022570 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.08e-12
Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 68  FLPIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQK------EVEREFK 127
            LPI E+EF ++ ++AQ+++EK+K  LLKIK +A+G+KAL E+K ++      E  +EF+
Sbjct: 6   LLPIVESEFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFE 65

Query: 128 KEVNETSPLEDNVGEEQPTKKKASEEQDVKKRLKKEK 158
           KE+ E SPLED V E+QP KK+  E QD  KR KK K
Sbjct: 66  KELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNK 102

[Close]

BLAST of CsGy3G022570 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.80e-04
Identity = 62/153 (40.52%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 11  EAGEKKHKENEERTSRKGVDKEEEKKKETDKRVEEDEEDKVGKEEEEENEREH-EKEPFL 70
           E  +K  KE EE+  RK V    EKKK   K++EE    KV KEE+EE E E  E    +
Sbjct: 76  EKKDKLRKEEEEKKKRKEV----EKKK---KKIEE----KVHKEEQEEQEEEVCEISASM 135

Query: 71  PIAETEFGRLVKEAQKRSEKVKFGLLKIKDQAKGLKALTEKKCQ---------------- 130
           PIA+ +F R+ ++AQK  EKVK  LLKIK +A+G+KAL E+K +                
Sbjct: 136 PIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKL 195

Query: 131 -------KEVER-------EFKKEVNETSPLED 132
                  KE E+       EF+KE++E SPL+D
Sbjct: 196 ALSVENSKEKEKTFEEYCEEFEKEISELSPLKD 217

The following BLAST results are available for this feature:

BLAST of CsGy3G022570 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G022570 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58010.1	1.45e-90	100.00	hypothetical protein Csa_010338 [Cucumis sativus]	[more]
KAA0048500.1	1.67e-11	49.48	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
TYJ97774.1	3.72e-04	40.52	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G022570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7X5	7.04e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G432430 PE=4 SV=1	[more]
A0A5A7TZE0	8.08e-12	49.48	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5D3BFC8	1.80e-04	40.52	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]

BLAST of CsGy3G022570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 29..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G022570.2	CsGy3G022570.2	mRNA