CsGy3G022340 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G022340
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein MNN4-like
Location	Gy14Chr3: 20742304 .. 20743159 (-)
RNA-Seq Expression	CsGy3G022340
Synteny	CsGy3G022340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCATTGTTGGCATTGGTTGAAGAAAGGAAGAAGGCAAGGGAAGAGGAAAAGAATGTGAGAAGCAGAAAGAAGAGAAAGAGAACAAAAAGAAAGAGAGAGAGGGAAAGAAAGGAAAAAGTACGAAAAGAGCGAGAGGAGGAAGCAAGAAGAGAAAAAGAACGAAAAGCAAAAGTAGAAGAAGAACAATGAAGGAGGGAGGAAATAGAGAAATAAGGCAAAAGACAACACGAAGGATCCTACACTCCTATCGCAGAGACTGAATTTGAGAGGGTTACAAAAACGGTTCAAGAGAAAAAGGAAAATGTGGCATATGACCTTCTTAAACTTGAATTCACGATGCATAGCATTAAGGCCGCAAGAAAAGAAAGAGATGAGGTTGAAGGAGCAAGAAGAACTCCTCAACAAAGTGGACAAAGTAACCCTCTTCGTGAAAAAGGGTAAGGCAAAAAGGACTCAAAGCGAGGAAATTTGCGAAGAGCTTGAAAAGAAACTGGAAGATTTAAGTCCTGTGGAGGATGAAGTGGTGAAACCTTCAAAGAAGAAAAAGAAGATCATCTTAAAAAAATAAGGTTTTGAAAGAACGATTCGCCAAGAGGAGAAAAGAAAAGGAATTAAAAAGGGTCCTGTAGGCAAAACGACCCTAAAATAAGAGGAAGAGGACCTGAGACTAGGCGATGAGAATGCTCCCCTCTTTATCGAGTATGTGAGTAAGAACTTCAAGATAGAAAATGGGTTCTTCCCCTTCAAAGACAATTTACCAACCTTGTTAAGGGCCCCCATTCGCGCTTTCAAGTGGGAAATTTTTTTCGATGAGGTATTTGAAGTCAGAGCAGACATAGTTCAAGCGTAA

mRNA sequence

ATGGCTTCATTGTTGGCATTGGTTGAAGAAAGGAAGAAGGCAAGGGAAGAGGAAAAGAATAGACTGAATTTGAGAGGGTTACAAAAACGGTTCAAGAGAAAAAGGAAAATGTGGCATATGACCTTCTTAAACTTGAATTCACGATGCATAGCATTAAGGCCGCAAGAAAAGAAAGAGATGAGGTTGAAGGAGCAAGAAGAACTCCTCAACAAAGTGGACAAAGTAACCCTCTTCGTGAAAAAGGGTAAGGCAAAAAGGACTCAAAGCGAGGAAATTTGCGAAGAGCTTGAAAAGAAACTGGAAGATTTAAGTCCTGTGGAGGATGAAGTGGAAGAGGACCTGAGACTAGGCGATGAGAATGCTCCCCTCTTTATCGAGTATGTGAGTAAGAACTTCAAGATAGAAAATGGGTTCTTCCCCTTCAAAGACAATTTACCAACCTTGTTAAGGGCCCCCATTCGCGCTTTCAAGTGGGAAATTTTTTTCGATGAGGTATTTGAAGTCAGAGCAGACATAGTTCAAGCGTAA

Coding sequence (CDS)

ATGGCTTCATTGTTGGCATTGGTTGAAGAAAGGAAGAAGGCAAGGGAAGAGGAAAAGAATAGACTGAATTTGAGAGGGTTACAAAAACGGTTCAAGAGAAAAAGGAAAATGTGGCATATGACCTTCTTAAACTTGAATTCACGATGCATAGCATTAAGGCCGCAAGAAAAGAAAGAGATGAGGTTGAAGGAGCAAGAAGAACTCCTCAACAAAGTGGACAAAGTAACCCTCTTCGTGAAAAAGGGTAAGGCAAAAAGGACTCAAAGCGAGGAAATTTGCGAAGAGCTTGAAAAGAAACTGGAAGATTTAAGTCCTGTGGAGGATGAAGTGGAAGAGGACCTGAGACTAGGCGATGAGAATGCTCCCCTCTTTATCGAGTATGTGAGTAAGAACTTCAAGATAGAAAATGGGTTCTTCCCCTTCAAAGACAATTTACCAACCTTGTTAAGGGCCCCCATTCGCGCTTTCAAGTGGGAAATTTTTTTCGATGAGGTATTTGAAGTCAGAGCAGACATAGTTCAAGCGTAA

Protein sequence

MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDENAPLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDEVFEVRADIVQA*

Homology

[Close]

BLAST of CsGy3G022340 vs. NCBI nr
Match: KGN57985.1 (hypothetical protein Csa_009960 [Cucumis sativus])

HSP 1 Score: 311 bits (797), Expect = 1.65e-105
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEM 60
           MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEM
Sbjct: 1   MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEM 60

Query: 61  RLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDEN 120
           RLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDEN
Sbjct: 61  RLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDEN 120

Query: 121 APLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDE 164
           APLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDE
Sbjct: 121 APLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDE 164

[Close]

BLAST of CsGy3G022340 vs. NCBI nr
Match: KAA0037951.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK19029.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 8.33e-16
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 55  QEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDL 114
           QE+KE +L++ E LL+KV+KV LFV+KGK K+   +E CE+LEK++E+LS +EDE     
Sbjct: 9   QERKESKLRKLE-LLSKVEKVALFVEKGKGKKKTFDEHCEKLEKEIEELSSLEDEASRPA 68

Query: 115 RLGDENAPLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDEVFEVRADIVQ 174
           +  + +     + VSK F IE G +P++  +P  L A IRA +W+ FF  V EV+  ++ 
Sbjct: 69  KKEESHNE---KEVSKQFMIEKGIYPYQGTMPEFLVASIRALRWKRFFQGV-EVKDGVLS 124

[Close]

BLAST of CsGy3G022340 vs. NCBI nr
Match: KAA0053481.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK02124.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 8.99e-15
Identity = 49/68 (72.06%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 43  LNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLED 102
           L + +  I    QEKKE RLKEQEELLNKVDKVTL V KGK KRTQSEEICEE  K+LE+
Sbjct: 65  LKVTAHDIKALVQEKKETRLKEQEELLNKVDKVTLSVDKGKPKRTQSEEICEEF-KELEE 124

Query: 103 LSPVEDEV 110
           LSP+EDEV
Sbjct: 125 LSPLEDEV 131

[Close]

BLAST of CsGy3G022340 vs. NCBI nr
Match: KAA0062287.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.39e-14
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 39  HMTFLNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEK 98
           H   + L    + + P EKKE++L+EQEELLNKVDK++L +KKGK K+T SEEI EE EK
Sbjct: 34  HNPRVKLVREFLRVLPYEKKEIKLREQEELLNKVDKISLSIKKGKTKKTSSEEIYEEFEK 93

Query: 99  KLEDLSPVEDEV 110
           KLEDLS  +DEV
Sbjct: 94  KLEDLSSFKDEV 105

[Close]

BLAST of CsGy3G022340 vs. NCBI nr
Match: TYK26699.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.10e-14
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 39  HMTFLNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEK 98
           H   + L    + + P EKKE++L+EQEELLNKVDK++L +KKGK K+T SEEI EE EK
Sbjct: 34  HNPRVKLVREFLRVLPYEKKEIKLREQEELLNKVDKISLSIKKGKTKKTSSEEIYEEFEK 93

Query: 99  KLEDLSPVEDEV 110
           KLEDLS  +DEV
Sbjct: 94  KLEDLSSFKDEV 105

[Close]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL
Match: A0A0A0L7S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418760 PE=4 SV=1)

HSP 1 Score: 311 bits (797), Expect = 8.00e-106
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEM 60
           MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEM
Sbjct: 1   MASLLALVEERKKAREEEKNRLNLRGLQKRFKRKRKMWHMTFLNLNSRCIALRPQEKKEM 60

Query: 61  RLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDEN 120
           RLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDEN
Sbjct: 61  RLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDLRLGDEN 120

Query: 121 APLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDE 164
           APLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDE
Sbjct: 121 APLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDE 164

[Close]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL
Match: A0A5D3D644 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00560 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.03e-16
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 55  QEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLEDLSPVEDEVEEDL 114
           QE+KE +L++ E LL+KV+KV LFV+KGK K+   +E CE+LEK++E+LS +EDE     
Sbjct: 9   QERKESKLRKLE-LLSKVEKVALFVEKGKGKKKTFDEHCEKLEKEIEELSSLEDEASRPA 68

Query: 115 RLGDENAPLFIEYVSKNFKIENGFFPFKDNLPTLLRAPIRAFKWEIFFDEVFEVRADIVQ 174
           +  + +     + VSK F IE G +P++  +P  L A IRA +W+ FF  V EV+  ++ 
Sbjct: 69  KKEESHNE---KEVSKQFMIEKGIYPYQGTMPEFLVASIRALRWKRFFQGV-EVKDGVLS 124

[Close]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL
Match: A0A5D3BSJ3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16540G00050 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.35e-15
Identity = 49/68 (72.06%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 43  LNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEKKLED 102
           L + +  I    QEKKE RLKEQEELLNKVDKVTL V KGK KRTQSEEICEE  K+LE+
Sbjct: 65  LKVTAHDIKALVQEKKETRLKEQEELLNKVDKVTLSVDKGKPKRTQSEEICEEF-KELEE 124

Query: 103 LSPVEDEV 110
           LSP+EDEV
Sbjct: 125 LSPLEDEV 131

[Close]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL
Match: A0A5A7V5R2 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00280 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.72e-15
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 39  HMTFLNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEK 98
           H   + L    + + P EKKE++L+EQEELLNKVDK++L +KKGK K+T SEEI EE EK
Sbjct: 34  HNPRVKLVREFLRVLPYEKKEIKLREQEELLNKVDKISLSIKKGKTKKTSSEEIYEEFEK 93

Query: 99  KLEDLSPVEDEV 110
           KLEDLS  +DEV
Sbjct: 94  KLEDLSSFKDEV 105

[Close]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL
Match: A0A5D3DT81 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003600 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.50e-14
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 39  HMTFLNLNSRCIALRPQEKKEMRLKEQEELLNKVDKVTLFVKKGKAKRTQSEEICEELEK 98
           H   + L    + + P EKKE++L+EQEELLNKVDK++L +KKGK K+T SEEI EE EK
Sbjct: 34  HNPRVKLVREFLRVLPYEKKEIKLREQEELLNKVDKISLSIKKGKTKKTSSEEIYEEFEK 93

Query: 99  KLEDLSPVEDEV 110
           KLEDLS  +DEV
Sbjct: 94  KLEDLSSFKDEV 105

The following BLAST results are available for this feature:

BLAST of CsGy3G022340 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G022340 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57985.1	1.65e-105	100.00	hypothetical protein Csa_009960 [Cucumis sativus]	[more]
KAA0037951.1	8.33e-16	42.15	protein MNN4-like [Cucumis melo var. makuwa] >TYK19029.1 protein MNN4-like [Cucu...	[more]
KAA0053481.1	8.99e-15	72.06	protein MNN4-like [Cucumis melo var. makuwa] >TYK02124.1 protein MNN4-like [Cucu...	[more]
KAA0062287.1	1.39e-14	59.72	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK26699.1	3.10e-14	59.72	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7S0	8.00e-106	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418760 PE=4 SV=1	[more]
A0A5D3D644	4.03e-16	42.15	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00...	[more]
A0A5D3BSJ3	4.35e-15	72.06	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16540G...	[more]
A0A5A7V5R2	6.72e-15	59.72	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00...	[more]
A0A5D3DT81	1.50e-14	59.72	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00...	[more]

BLAST of CsGy3G022340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..99
None	No IPR available	COILS	Coil	Coil	coord: 5..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G022340.2	CsGy3G022340.2	mRNA