CsGy3G022297 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G022297
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 20703401 .. 20704907 (-)
RNA-Seq Expression	CsGy3G022297
Synteny	CsGy3G022297

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCCTTTTCCCATCACGATTAAAGCCCTCGTCACCGCCTTTTCACTATGCACCTCCAACCGCCACAAATCCCACGACTAACGCAGCCTCTGCACGACGACGATCGCCCAGACGAAGCCTTCTCCGCCTCGCGTCTCCATCCATCAGCCATAGCCGCACTGTTTTACCATCGCGAAGCCGTGCCGTCCAGTCTCCCCCAGTCGTCTGTGCCTCGTGCTTCACCCGTGCCGAAGCCAATCATGTGCATTTCCGTCAGCTTCGAGCCTAAGTTGCGTCTCTTCGGGTGAGCTACCGTTGACGTCCGAGCCACGTCCCTTCACCGAGTCGCGTGAGCCGTCTTCATTGATCCGAGCCATTCCGTGTAAGCCGTACGCCAGCCATTTGCAACCGAGTCGTTCCTGTGTGAGCCGTACGCGAGTCATGAGTCTCAAGACTTGAGTTGAAGCCTTGCTAGTCGAGCCACTTTCAGTTTTAGCCGTCTGCAACATATTTAAGCCCTTAGTGAGTTTTTGCTTAGTTCTAGTTGGGTTTGGTACGCCCAAATAATTATTGTTTTAGGTCTTAAATGAGTTAAAACTAATTATATTGTTTGAAGGTTAAGGTTTGGTTGAGGAATTGAGCTATACAAATTTTCATTCAAGGTTGTATTGAGATCAACTTTAAATCTTGGGGTAAGTTTGATTGAGTTTGTTGCCTAATTAAATAGTAAAGTGATAGATTGGCAAAATTATTAAGTTTAAATTTTGTTCATGTTTAAGACGGAGTTTATTAGGAGGATTTGACTCTCAATACTATTTCTTTTGCAAATCTCCCGTTAAGAGATTTTACCTACTAAACCCCACTCCATGCACATTCTGTAACTAGCGTAACTAAGAGAGGTATAATGTGTCTTCTTGAAATGACCTTATAAATGGTTACTTCAGTAACCATATCATGATTGAGATACAATATTATTTGTTTAGGCATGCTATGATCAAATATGTACTTTTTTGAGATGTTGATGTTATGATAAGCATAAATAGGCTATAGTGTTTTTTAGTTTTGCCTGTTAGAGTCAGACCATATGAGATATGAGGGTCCCTCGAGGTCACCACCTATGCATGTCCGTGTGGCTAATTTAAGATGTGATTCGACGGGACCATTTACAGCCTGACTCTTCTATAGGGTGATTCCTTCGGGTTCACCGAGAGCCTAGATATGTCCCTACGGAACCACTGGATAATATGAGTTCGGGAGCGCAATAGTATGCCCATGTTACCGAACTCTAACGAGAGGTTGACAGACACATAGTGAGACTAATATGGGTCTCTTACTGAGTATAAAGTTATACTCACTCTTTTAAATATTTAATTTTCAGGTAAGGATAGAGACAAGGGCAAACTGGCTTATGAAAAGACTCACTCTTTTAAATATTTAATTTTCAGGTAAGGATAGAGACAAGGGCAAACTGGCTTATGAAAAGAAGTGACCATGGATCTCAGTTTTCTTTCGCATTTATATTTAAGC

mRNA sequence

TCTTCCTTTTCCCATCACGATTAAAGCCCTCGTCACCGCCTTTTCACTATGCACCTCCAACCGCCACAAATCCCACGACTAACGCAGCCTCTGCACGACGACGATCGCCCAGACGAAGCCTTCTCCGCCTCGCGTCTCCATCCATCAGCCATAGCCGCACTGTTTTACCATCGCGAAGCCGTGCCGTCCAGTCTCCCCCAGTCGTCTGTGCCTCGTGCTTCACCCGTGCCGAAGCCAATCATGTGCATTTCCGTCAGCTTCGAGCCTAAGTTGCGTCTCTTCGGGTGAGCTACCGTTGACGTCCGAGCCACGTCCCTTCACCGAGTCGCGTGAGCCGTCTTCATTGATCCGAGCCATTCCGTGTAAGCCGTACGCCAGCCATTTGCAACCGAGTCGTTCCTGTGTGAGCCGTACGCGAGTCATGAGTCTCAAGACTTGAGTTGAAGCCTTGCTAGTCGAGCCACTTTCAGTTTTAGCCGTCTGCAACATATTTAAGCCCTTAGTTAAGGTTTGGTTGAGGAATTGAGCTATACAAATTTTCATTCAAGGTTGTATTGAGATCAACTTTAAATCTTGGGGTAAGGATAGAGACAAGGGCAAACTGGCTTATGAAAAGAAGTGACCATGGATCTCAGTTTTCTTTCGCATTTATATTTAAGC

Coding sequence (CDS)

ATGCACCTCCAACCGCCACAAATCCCACGACTAACGCAGCCTCTGCACGACGACGATCGCCCAGACGAAGCCTTCTCCGCCTCGCGTCTCCATCCATCAGCCATAGCCGCACTGTTTTACCATCGCGAAGCCGTGCCGTCCAGTCTCCCCCAGTCGTCTGTGCCTCGTGCTTCACCCGTGCCGAAGCCAATCATGTGCATTTCCGTCAGCTTCGAGCCTAAGTTGCGTCTCTTCGGGTGA

Protein sequence

MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPVPKPIMCISVSFEPKLRLFG*

Homology

[Close]

BLAST of CsGy3G022297 vs. NCBI nr
Match: KAE8650693.1 (hypothetical protein Csa_011801 [Cucumis sativus])

HSP 1 Score: 160 bits (405), Expect = 1.72e-49
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPV 60
          MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPV
Sbjct: 1  MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPV 60

Query: 61 PKPIMCISVSFEPKLRLFG 79
          PKPIMCISVSFEPKLRLFG
Sbjct: 61 PKPIMCISVSFEPKLRLFG 79

The following BLAST results are available for this feature:

BLAST of CsGy3G022297 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G022297 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650693.1	1.72e-49	100.00	hypothetical protein Csa_011801 [Cucumis sativus]	[more]

BLAST of CsGy3G022297 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsGy3G022297 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G022297.1	CsGy3G022297.1	mRNA