Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCATTCCACCCCTTCCGCCACACCATCATCTTGATTCAGACGTTGGTGGACCACAGATGGTCATTCCACCACCTCCACCACACCATCATCTTGATTCTGATGTTGGCAGCCCTCAAATGGTTATCCCTCCTCCCCCACCGCACAAGCTTCCACAATCTGATGTTGGTGGCCCTCAATTGGTCATTCCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCTCACCACCTCCTCTGCACAAACATCCACAATCAGATGTTTGCGGTCCTCAAATGGTCATTCCACCCCCTCCTCCACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCATAAACATCCACAATCTGATGTTGGCAGGCCTCAAATGGTCATTCCACCCCCTCATCCACACCATCATCATGATTCTGACGTTGGTGGCCCTCAAATGCTCATCCCACCACCTCCACCGCCCAAACATCCATAA
mRNA sequence
ATGGTCATTCCACCCCTTCCGCCACACCATCATCTTGATTCAGACGTTGGTGGACCACAGATGGTCATTCCACCACCTCCACCACACCATCATCTTGATTCTGATGTTGGCAGCCCTCAAATGGTTATCCCTCCTCCCCCACCGCACAAGCTTCCACAATCTGATGTTGGTGGCCCTCAATTGGTCATTCCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCTCACCACCTCCTCTGCACAAACATCCACAATCAGATGTTTGCGGTCCTCAAATGGTCATTCCACCCCCTCCTCCACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCATAAACATCCACAATCTGATGTTGGCAGGCCTCAAATGGTCATTCCACCCCCTCATCCACACCATCATCATGATTCTGACGTTGGTGGCCCTCAAATGCTCATCCCACCACCTCCACCGCCCAAACATCCATAA
Coding sequence (CDS)
ATGGTCATTCCACCCCTTCCGCCACACCATCATCTTGATTCAGACGTTGGTGGACCACAGATGGTCATTCCACCACCTCCACCACACCATCATCTTGATTCTGATGTTGGCAGCCCTCAAATGGTTATCCCTCCTCCCCCACCGCACAAGCTTCCACAATCTGATGTTGGTGGCCCTCAATTGGTCATTCCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCTCACCACCTCCTCTGCACAAACATCCACAATCAGATGTTTGCGGTCCTCAAATGGTCATTCCACCCCCTCCTCCACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCATAAACATCCACAATCTGATGTTGGCAGGCCTCAAATGGTCATTCCACCCCCTCATCCACACCATCATCATGATTCTGACGTTGGTGGCCCTCAAATGCTCATCCCACCACCTCCACCGCCCAAACATCCATAA
Protein sequence
MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQLVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKHP*
Homology
BLAST of CsGy3G020835 vs. NCBI nr
Match:
XP_031737527.1 (carboxypeptidase Y-like [Cucumis sativus])
HSP 1 Score: 310 bits (795), Expect = 2.24e-105
Identity = 154/171 (90.06%), Postives = 158/171 (92.40%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPP PPHHHLDSDVGGPQMVIPPPPPHHHLDSDVG PQMVIPPPPPHKLPQSDVGGPQ
Sbjct: 21 MVIPPPPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHKLPQSDVGGPQ 80
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
LVIPPPPPHHHLNSDVGGPQMVI PPP HK PQSDV GPQMVIPPPPPHHHLDSDVGGPQ
Sbjct: 81 LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 140
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKH 171
MVIPPPPPHKHPQSDVG PQ+VIPPP PHHH DSD+GG +M+IP PPP H
Sbjct: 141 MVIPPPPPHKHPQSDVGGPQLVIPPPPPHHHLDSDIGGLKMIIPLPPPHHH 191
BLAST of CsGy3G020835 vs. NCBI nr
Match:
KGN57853.2 (hypothetical protein Csa_010303 [Cucumis sativus])
HSP 1 Score: 312 bits (799), Expect = 6.47e-105
Identity = 155/171 (90.64%), Postives = 158/171 (92.40%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPP PPHHHLDSDVGGPQMVIPPPPPHHHLDSDVG PQMVIPPPPPHKLPQSDVGGPQ
Sbjct: 1 MVIPPPPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHKLPQSDVGGPQ 60
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
LVIPPPPPHHHLNSDVGGPQMVI PPP HK PQSDV GPQMVIPPPPPHHHLDSDVGGPQ
Sbjct: 61 LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 120
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKH 171
MVIPPPPPHKHPQSDVG PQ+VIPPP PHHH DSD+GG QM+IP PPP H
Sbjct: 121 MVIPPPPPHKHPQSDVGGPQLVIPPPPPHHHLDSDIGGLQMIIPLPPPHHH 171
BLAST of CsGy3G020835 vs. NCBI nr
Match:
KAE8650607.1 (hypothetical protein Csa_009639 [Cucumis sativus])
HSP 1 Score: 306 bits (784), Expect = 2.56e-104
Identity = 155/175 (88.57%), Postives = 159/175 (90.86%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVG PQMVIPPPPPHKLPQSDVGGPQ
Sbjct: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHKLPQSDVGGPQ 60
Query: 61 LVIPPPPPHHH---LNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVG 120
LVIPP HH L + +MVI PPP+HKHPQSDVCGPQMVIPPPPPHHHLDSDVG
Sbjct: 61 LVIPP---LHHTIILIRTLVALKMVIPPPPMHKHPQSDVCGPQMVIPPPPPHHHLDSDVG 120
Query: 121 GPQMVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKHP 172
GPQMVIPPPPPHKHPQSDVGRPQMVIPPPHPHHH DSDVGGPQM+IPPPPPPKHP
Sbjct: 121 GPQMVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHLDSDVGGPQMVIPPPPPPKHP 172
BLAST of CsGy3G020835 vs. NCBI nr
Match:
XP_031737525.1 (carboxypeptidase Y-like [Cucumis sativus])
HSP 1 Score: 307 bits (786), Expect = 2.01e-103
Identity = 152/171 (88.89%), Postives = 156/171 (91.23%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
M+IP PPHHH DSDVGGPQMVIPPPPPHHHLDSDVG PQMVIPPPPPHKLPQSD+GGPQ
Sbjct: 60 MIIPLPPPHHHFDSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHKLPQSDIGGPQ 119
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
LVIPPPPPHHHLNSDVGGPQMVI PPP HK PQSDV GPQMVIPPPPPHHHLDSDVGGPQ
Sbjct: 120 LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 179
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKH 171
MVIPPPPPHKHPQSDVG PQMVIPPP PHHH DSD+GG QM+IP PPP H
Sbjct: 180 MVIPPPPPHKHPQSDVGGPQMVIPPPPPHHHLDSDIGGLQMIIPLPPPHHH 230
BLAST of CsGy3G020835 vs. NCBI nr
Match:
XP_031740861.1 (splicing factor 3B subunit 4-like isoform X2 [Cucumis sativus] >XP_031740862.1 splicing factor 3B subunit 4-like isoform X2 [Cucumis sativus] >KGN51282.2 hypothetical protein Csa_008210 [Cucumis sativus])
HSP 1 Score: 300 bits (767), Expect = 2.07e-101
Identity = 150/171 (87.72%), Postives = 154/171 (90.06%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPP PPH HLDSD+GGPQMVIP PPPHHHLDSDVG PQMVIPPPPPHKLPQSDVGGPQ
Sbjct: 1 MVIPPPPPHRHLDSDIGGPQMVIPSPPPHHHLDSDVGGPQMVIPPPPPHKLPQSDVGGPQ 60
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
LVIPPPPPHHHLNSD+GGPQMVISPPP HKHPQSDV GPQMVIPPPPPHHHLD DVGG Q
Sbjct: 61 LVIPPPPPHHHLNSDIGGPQMVISPPPPHKHPQSDVGGPQMVIPPPPPHHHLDCDVGGSQ 120
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKH 171
MVI PPP HK+PQSDVG PQMVI PP PHHH DSDVGGPQM+I PPPP H
Sbjct: 121 MVITPPPSHKYPQSDVGGPQMVISPPPPHHHPDSDVGGPQMVISPPPPHHH 171
BLAST of CsGy3G020835 vs. ExPASy TrEMBL
Match:
A0A5A7VHN8 (Formin-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00130 PE=4 SV=1)
HSP 1 Score: 290 bits (741), Expect = 3.36e-97
Identity = 146/168 (86.90%), Postives = 150/168 (89.29%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPP PPHHHLDSD+GGPQMVIPPPPPH H SDVG PQMVIPPPPPHKLPQSDVG PQ
Sbjct: 59 MVIPPPPPHHHLDSDIGGPQMVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGEPQ 118
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
+VIPPPPPHHHL+SDVGGPQMVI PP HK PQSDV GPQMVIPPPPPHHHLD DV GPQ
Sbjct: 119 MVIPPPPPHHHLDSDVGGPQMVIPQPPPHKFPQSDVGGPQMVIPPPPPHHHLDFDVDGPQ 178
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPP 168
MVI PPPPHK PQSDVG PQMVIPPP PHHH DSDVGGPQM+IPPPPP
Sbjct: 179 MVIAPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPP 226
BLAST of CsGy3G020835 vs. ExPASy TrEMBL
Match:
A0A5D3CDK8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=4 SV=1)
HSP 1 Score: 282 bits (721), Expect = 2.02e-94
Identity = 142/171 (83.04%), Postives = 149/171 (87.13%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPP PPHHHL+SDVGGPQMVIPPPPPH SDVG PQMVIPPPPPH SDVGGPQ
Sbjct: 21 MVIPPPPPHHHLNSDVGGPQMVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 80
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
+VIPPPPPHHHL+SD+GGPQMVI PPP HK PQSD+ GPQMVIPPPPPHHHLDSDVGGPQ
Sbjct: 81 MVIPPPPPHHHLDSDIGGPQMVIPPPPPHKFPQSDIGGPQMVIPPPPPHHHLDSDVGGPQ 140
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPPPKH 171
MVIPPPPPH + SDVG PQMVIPPP PHHH DSDVGGPQM+IPPPPP H
Sbjct: 141 MVIPPPPPHHYLDSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHHH 191
BLAST of CsGy3G020835 vs. ExPASy TrEMBL
Match:
A0A5A7UNF2 (Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002060 PE=4 SV=1)
HSP 1 Score: 281 bits (718), Expect = 5.78e-94
Identity = 141/168 (83.93%), Postives = 148/168 (88.10%), Query Frame = 0
Query: 1 MVIPPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQ 60
MVIPP PPHHHL+SDVGGPQMVIPPPPPH SDVG PQMVIPPPPPH SDVGGPQ
Sbjct: 41 MVIPPPPPHHHLNSDVGGPQMVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 100
Query: 61 LVIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQ 120
+VIPPPPPHHHL+SD+GGPQMVI PPP HK PQSD+ GPQMVIPPPPPHHHLDSDVGGPQ
Sbjct: 101 MVIPPPPPHHHLDSDIGGPQMVIPPPPPHKFPQSDIGGPQMVIPPPPPHHHLDSDVGGPQ 160
Query: 121 MVIPPPPPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPP 168
MVIPPPPPH + SDVG PQMVIPPP PHHH DSDVGGPQM+IPPPPP
Sbjct: 161 MVIPPPPPHHYLDSDVGGPQMVIPPPPPHHHLDSDVGGPQMIIPPPPP 208
BLAST of CsGy3G020835 vs. ExPASy TrEMBL
Match:
A0A5D3CIK1 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=4 SV=1)
HSP 1 Score: 269 bits (688), Expect = 1.01e-89
Identity = 135/162 (83.33%), Postives = 141/162 (87.04%), Query Frame = 0
Query: 7 PPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQLVIPPP 66
PP HHLDSD+GGPQM+IPPPPPH SDVG PQMVIPPPPPH SD+GGPQ+VIPPP
Sbjct: 25 PPPHHLDSDIGGPQMIIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDIGGPQMVIPPP 84
Query: 67 PPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQMVIPPP 126
PPH H SDVGGPQMVI PPP HK PQSDV GPQMVIPPPPPHHHLDSDVGGPQMVIPPP
Sbjct: 85 PPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPP 144
Query: 127 PPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPP 168
PPHK PQSDVG PQMVIPPP PHHH DSDVGGPQM++PPPPP
Sbjct: 145 PPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVVPPPPP 186
BLAST of CsGy3G020835 vs. ExPASy TrEMBL
Match:
A0A5A7UL62 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE=4 SV=1)
HSP 1 Score: 267 bits (682), Expect = 8.29e-89
Identity = 134/162 (82.72%), Postives = 141/162 (87.04%), Query Frame = 0
Query: 7 PPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSDVGGPQLVIPPP 66
PP HHLDSD+GGPQM+IPPPPPH SDVG PQMVIPPPPPH SD+GGPQ+VIPPP
Sbjct: 25 PPPHHLDSDIGGPQMIIPPPPPHKFPQSDVGEPQMVIPPPPPHHHLDSDIGGPQMVIPPP 84
Query: 67 PPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVIPPPPPHHHLDSDVGGPQMVIPPP 126
PPH H SDVGGPQMVI PPP HK PQSDV GPQMVIPPPPPHHHLDSDVGGPQMVIPPP
Sbjct: 85 PPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPP 144
Query: 127 PPHKHPQSDVGRPQMVIPPPHPHHHHDSDVGGPQMLIPPPPP 168
PPHK PQSDVG PQMVIPPP PHH+ DSDVGGPQM++PPPPP
Sbjct: 145 PPHKFPQSDVGGPQMVIPPPPPHHYLDSDVGGPQMVVPPPPP 186
BLAST of CsGy3G020835 vs. TAIR 10
Match:
AT5G07740.1 (actin binding )
HSP 1 Score: 42.4 bits (98), Expect = 4.4e-04
Identity = 60/191 (31.41%), Postives = 80/191 (41.88%), Query Frame = 0
Query: 4 PPLPPHHHLDSDVGGPQMVIPPPPPHHHLDSDVGSPQMVIPPPPPHKLPQSD--VGGPQL 63
PPLP + H + + PPPPP S+ + V+PPPPP P S +
Sbjct: 688 PPLPTYSHYQT-----SQLPPPPPPPPPFSSERPNSGTVLPPPPPPPPPFSSERPNSGTV 747
Query: 64 VIPPPPPHHHLNSDVGGPQMVISPPPLHKHPQSDVCGPQMVI----------------PP 123
+ PPPPP +S+ V+ PPP P V + I PP
Sbjct: 748 LPPPPPPPLPFSSERPNSGTVLPPPP--SPPWKSVYASALAIPAICSTSQAPTSSPTPPP 807
Query: 124 PPPHHH----LDSDVGGPQMVIPPPPPHKHPQSDVGRPQMVI---PPPHPHHHHDSDVGG 170
PPP ++ SD+ Q+ PPPPP P + V R + PPP P S
Sbjct: 808 PPPAYYSVGQKSSDLQTSQLPSPPPPPPPPPFASVRRNSETLLPPPPPPPPPPFASVRRN 867
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VHN8 | 3.36e-97 | 86.90 | Formin-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G... | [more] |
A0A5D3CDK8 | 2.02e-94 | 83.04 | Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=... | [more] |
A0A5A7UNF2 | 5.78e-94 | 83.93 | Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CIK1 | 1.01e-89 | 83.33 | Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=... | [more] |
A0A5A7UL62 | 8.29e-89 | 82.72 | Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE... | [more] |