CsGy3G020645 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G020645
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 17701816 .. 17702916 (-)
RNA-Seq ExpressionCsGy3G020645
SyntenyCsGy3G020645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCCCACTCATCGGTCTTTCACCTCGTCAAGGGATAGTTCTTCCTCAACTTTTGTGACAGATTCCCTTTCATGAGCTACCTTCTTCTGCTCCATGGGCTGACTCTTGCCACACGCACGACAGTCGAAGCTCGATCACACTACCTTCTTTCCCATTCAAGCTCATGGTTATTCACACCGCTTCGTCCTCTGTCAATCTCGTCGGACCTGGTAATTGATTTCGTTTTCTACTTGTTTTGAATAAACTGATTTACGTTTATCCTCTTGATTTGATTAATAAGATGATTTGAATAAAAACCTAATTGCTACTTTTGCATCTCAAGAATTTAAAAGCCCTAAATATCCATTTGGTTATGGTAAAATTAGGTCACTCTTTCCACTGCTTGGTTAACCTCAACTAGAAAGAATTAGGCTCATAATCTCAAAATACTCTATGCATGCAAACACATTCTACTATGTAAGTAAGTGTCCTTATTAAACCTCACAATCTCTTCCTACATTGATTGACAATATACTTTATCATCATTCTTCAATTGACCACACAAGTCGAAAAGCTTATCATGACCAAGTTTTGCCCATTACATAAGCAATCTTTGTGAAGCTGACACAAACTTCATTCATTCAATGAATAGCAATAACCAATATGGTAGAAAGCAAATAATCACATTAGAAGCCAAATCAAACTAAAAAAGGGAAGAGAAATTTAACTTACAGTTGCACAATTAAAATATAAGTCTAGATTTGACAATATTATTTTTATCATTTTCCTGTAAAATATTATTAAAGATCAATAAATTTTTAGAACTTCAAAATAAACCTGAAACTCAACAGTTGAGTTATCAAGTTGTGGAAATTTAGAATGAATGAGGGCACAACTATTACTTTAGACACGCACCGCATTCTGATATGCCTTCAAAGATTGCAAAAGCTTACTATAATCCCACGCTTGGATAACAAAAAAAGTTGTAAGGCATGCATTTCCTAGATTATCTGAAAAACAAAATAGTGCAGATGTGTTATATTATTATTTGCGTTTATGTTATGTACAAATCATTTGTGTGTTCAATTGTTGTTGGAGAAAAATTGAAGATTCATAG

mRNA sequence

ATGGAGGCCCCACTCATCGGTCTTTCACCTCGTCAAGGGATAATTCCCTTTCATGAGCTACCTTCTTCTGCTCCATGGGCTGACTCTTGCCACACGCACGACAGTCGAAGCTCGATCACACTACCTTCTTTCCCATTCAAGCTCATGGTTATTCACACCGCTTCGTCCTCTGTCAATCTCGTCGGACCTGATTCATAG

Coding sequence (CDS)

ATGGAGGCCCCACTCATCGGTCTTTCACCTCGTCAAGGGATAATTCCCTTTCATGAGCTACCTTCTTCTGCTCCATGGGCTGACTCTTGCCACACGCACGACAGTCGAAGCTCGATCACACTACCTTCTTTCCCATTCAAGCTCATGGTTATTCACACCGCTTCGTCCTCTGTCAATCTCGTCGGACCTGATTCATAG

Protein sequence

MEAPLIGLSPRQGIIPFHELPSSAPWADSCHTHDSRSSITLPSFPFKLMVIHTASSSVNLVGPDS*
Homology
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BLAST of CsGy3G020645 vs. NCBI nr
Match: KAE8650595.1 (hypothetical protein Csa_010416, partial [Cucumis sativus])

HSP 1 Score: 103 bits (256), Expect = 3.46e-27
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0 

Query: 15 IPFHELPSSAPWADSCHTHDSRSSITLPSFPFKLMVIHTASSSVNLVGPDS 65
          IPFHELPSSAPWADS HTHDSRSSITLPSFPFKL+VIHTASSSVNL+GPDS
Sbjct: 1  IPFHELPSSAPWADSSHTHDSRSSITLPSFPFKLVVIHTASSSVNLIGPDS 51

The following BLAST results are available for this feature:
BLAST of CsGy3G020645 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G020645 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650595.13.46e-2794.12hypothetical protein Csa_010416, partial [Cucumis sativus][more]
BLAST of CsGy3G020645 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy3G020645 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020645.1CsGy3G020645.1mRNA