CsGy3G020535 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G020535
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 17452803 .. 17453569 (-)
RNA-Seq ExpressionCsGy3G020535
SyntenyCsGy3G020535
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGGATCCAAGCATCAAAGTCCCCCAACTACCAACGGCCCCCCAAAATTCAATATCTTCCATAGTTTCATTAATCTTCATTGTTATCTCTTCACCATTTCATCACTCGTTCACCTCTCCATTGGACTTTCTTCTTCAAACACCATGGCTGCACTGTCCACACCATCCATCGGGACCATCATTCTCCTTCTCCTCCTCATTCCTTCCGGCTTCACCGTTAATGACACTGCTGCCTCCGCCTCTTGCAACAGCAGCCACTCAAAGAAATGCCACCTTGTGAGAGACGATGTCGGAGATTACGAATTCATGATGGAATCGGAGATGGGATGGATGCTGTCAATTAACTACGATAAATACAAATCACCACCAACCAGAATAGCCAACAAGCAGGTAGTGAAAGACGACTGTGGCCGACCACCGCGGTACGAAAGTTGTCTTGGCAGGAAAAGGGACACGCTGATACAGGAAAAATGTGCTGTCTACAAACGAGGCTGTTAATGAAATGGAAAAGAGTAGAATAAAAGGAAGATGGATTTGTGGTTAACATTTGTGGGATGTGTTGTTAAGTGGATGTCTAAGTTAAATTAATTTGGTTCGTTTGTTGGAAGGTGGATTTAGTTTTGGTGTAGATGTTTGTGAATCAATTAATTTGAAAAATAACAATGTCTTTTGTGGTTTTATGTATGTTTTTCTTTTATTGATTTTAGTTTGGATTTTCAAAATATTCATTGGAAATAGATCAAAAGGGGAGAAAATTTAGAAGTGGA

mRNA sequence

ATTGGATCCAAGCATCAAAGTCCCCCAACTACCAACGGCCCCCCAAAATTCAATATCTTCCATAGTTTCATTAATCTTCATTGTTATCTCTTCACCATTTCATCACTCGTTCACCTCTCCATTGGACTTTCTTCTTCAAACACCATGGCTGCACTGTCCACACCATCCATCGGGACCATCATTCTCCTTCTCCTCCTCATTCCTTCCGGCTTCACCGTTAATGACACTGCTGCCTCCGCCTCTTGCAACAGCAGCCACTCAAAGAAATGCCACCTTGTGAGAGACGATGTCGGAGATTACGAATTCATGATGGAATCGGAGATGGGATGGATGCTGTCAATTAACTACGATAAATACAAATCACCACCAACCAGAATAGCCAACAAGCAGGTAGTGAAAGACGACTGTGGCCGACCACCGCGGTACGAAAGTTGTCTTGGCAGGAAAAGGGACACGCTGATACAGGAAAAATGTGCTGTCTACAAACGAGGCTGTTAATGAAATGGAAAAGAGTAGAATAAAAGGAAGATGGATTTGTGGTTAACATTTGTGGGATGTGTTGTTAAGTGGATGTCTAAGTTAAATTAATTTGGTTCGTTTGTTGGAAGGTGGATTTAGTTTTGGTGTAGATGTTTGTGAATCAATTAATTTGAAAAATAACAATGTCTTTTGTGGTTTTATGTATGTTTTTCTTTTATTGATTTTAGTTTGGATTTTCAAAATATTCATTGGAAATAGATCAAAAGGGGAGAAAATTTAGAAGTGGA

Coding sequence (CDS)

ATGGCTGCACTGTCCACACCATCCATCGGGACCATCATTCTCCTTCTCCTCCTCATTCCTTCCGGCTTCACCGTTAATGACACTGCTGCCTCCGCCTCTTGCAACAGCAGCCACTCAAAGAAATGCCACCTTGTGAGAGACGATGTCGGAGATTACGAATTCATGATGGAATCGGAGATGGGATGGATGCTGTCAATTAACTACGATAAATACAAATCACCACCAACCAGAATAGCCAACAAGCAGGTAGTGAAAGACGACTGTGGCCGACCACCGCGGTACGAAAGTTGTCTTGGCAGGAAAAGGGACACGCTGATACAGGAAAAATGTGCTGTCTACAAACGAGGCTGTTAA

Protein sequence

MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEMGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC*
Homology
BLAST of CsGy3G020535 vs. NCBI nr
Match: KGN57776.1 (hypothetical protein Csa_010194 [Cucumis sativus])

HSP 1 Score: 242 bits (617), Expect = 1.23e-80
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEM 60
           MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEM
Sbjct: 1   MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEM 60

Query: 61  GWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC 117
           GWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC
Sbjct: 61  GWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC 117

BLAST of CsGy3G020535 vs. NCBI nr
Match: KAA0032826.1 (hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa] >TYK30382.1 hypothetical protein E5676_scaffold575G00600 [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (386), Expect = 2.23e-45
Identity = 85/118 (72.03%), Postives = 94/118 (79.66%), Query Frame = 0

Query: 1   MAALSTPSIGTIIL--LLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEF-MME 60
           MAALSTPSIGTIIL  LL+LI SGFTVNDT ASASCN+SHSKKCHLVRDDV DY+  MME
Sbjct: 1   MAALSTPSIGTIILFLLLILIRSGFTVNDTTASASCNNSHSKKCHLVRDDVADYKLIMME 60

Query: 61  SEMGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115
            EMG ML ++++KY +P T  ANK      CGRPPRY+SCLG KRDT  QEKC VYKR
Sbjct: 61  LEMGRML-LDFNKYTTPQTGTANKNSG-GSCGRPPRYDSCLGEKRDTPPQEKCYVYKR 116

BLAST of CsGy3G020535 vs. NCBI nr
Match: XP_022143304.1 (uncharacterized protein LOC111013208 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 7.83e-13
Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 0

Query: 2   AALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEMG 61
           AAL  P+    I+ LLL P+G       A  S N + +   HLV D   D EF+MES + 
Sbjct: 6   AALMIPT-AVAIVFLLLSPTG-----CIALISSNDTSNTIKHLVGDKDLDSEFLMESHLS 65

Query: 62  WMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC 117
            +L+ N   +++  T  AN+  V  DC R PRY+SCLG+K      E CA Y R C
Sbjct: 66  RILASNSQNFQTSSTNNANRAAV--DCSRQPRYDSCLGQKNGVPPPENCATYNRVC 113

BLAST of CsGy3G020535 vs. NCBI nr
Match: KAA0042447.1 (hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa] >TYK03509.1 hypothetical protein E5676_scaffold121G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 3.20e-12
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 0

Query: 5   STPSIGTIILLLLL--IPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEMGW 64
           S P++  IIL+LL   I    TVN+TA      S +     L+ D+  D EF+ME++   
Sbjct: 6   SIPTMAIIILILLFNTIGCNTTVNETAPEWCYGSENC----LIGDESSDSEFLMETDTSR 65

Query: 65  MLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115
           ML +++   ++P T   N+Q V + CGRPPRY+SC+G KR     E C V  R
Sbjct: 66  ML-LDFQNLQTPSTNNPNRQSVPE-CGRPPRYDSCIGEKRSISNPENCDVRNR 112

BLAST of CsGy3G020535 vs. NCBI nr
Match: KGN53798.1 (hypothetical protein Csa_014747 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.17e-11
Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 0

Query: 2   AALSTPSIGTIILLLLLIP--SGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 61
           A L+ PS+  +I +LLL P  S   +NDT  S  C+S+  + C LV D     EF+M +E
Sbjct: 11  ATLTMPSMAFLITILLLNPIISNAGMNDTE-SKWCDSTGLENC-LVGDLNSHSEFLMLTE 70

Query: 62  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115
              ML   +  +++P    ANK+ V D C RPPRY+SCLG KR     E C+   R
Sbjct: 71  SSGMLVDQFLTFQTPKANDANKESVPD-CSRPPRYDSCLGSKRSIPNPEPCSTLNR 123

BLAST of CsGy3G020535 vs. ExPASy TrEMBL
Match: A0A0A0LCI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 5.94e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEM 60
           MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEM
Sbjct: 1   MAALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEM 60

Query: 61  GWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC 117
           GWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC
Sbjct: 61  GWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC 117

BLAST of CsGy3G020535 vs. ExPASy TrEMBL
Match: A0A5D3E3B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00600 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 1.08e-45
Identity = 85/118 (72.03%), Postives = 94/118 (79.66%), Query Frame = 0

Query: 1   MAALSTPSIGTIIL--LLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEF-MME 60
           MAALSTPSIGTIIL  LL+LI SGFTVNDT ASASCN+SHSKKCHLVRDDV DY+  MME
Sbjct: 1   MAALSTPSIGTIILFLLLILIRSGFTVNDTTASASCNNSHSKKCHLVRDDVADYKLIMME 60

Query: 61  SEMGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115
            EMG ML ++++KY +P T  ANK      CGRPPRY+SCLG KRDT  QEKC VYKR
Sbjct: 61  LEMGRML-LDFNKYTTPQTGTANKNSG-GSCGRPPRYDSCLGEKRDTPPQEKCYVYKR 116

BLAST of CsGy3G020535 vs. ExPASy TrEMBL
Match: A0A6J1CNY1 (uncharacterized protein LOC111013208 OS=Momordica charantia OX=3673 GN=LOC111013208 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.79e-13
Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 0

Query: 2   AALSTPSIGTIILLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEMG 61
           AAL  P+    I+ LLL P+G       A  S N + +   HLV D   D EF+MES + 
Sbjct: 6   AALMIPT-AVAIVFLLLSPTG-----CIALISSNDTSNTIKHLVGDKDLDSEFLMESHLS 65

Query: 62  WMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKRGC 117
            +L+ N   +++  T  AN+  V  DC R PRY+SCLG+K      E CA Y R C
Sbjct: 66  RILASNSQNFQTSSTNNANRAAV--DCSRQPRYDSCLGQKNGVPPPENCATYNRVC 113

BLAST of CsGy3G020535 vs. ExPASy TrEMBL
Match: A0A5D3BZL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001310 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.55e-12
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 0

Query: 5   STPSIGTIILLLLL--IPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESEMGW 64
           S P++  IIL+LL   I    TVN+TA      S +     L+ D+  D EF+ME++   
Sbjct: 6   SIPTMAIIILILLFNTIGCNTTVNETAPEWCYGSENC----LIGDESSDSEFLMETDTSR 65

Query: 65  MLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115
           ML +++   ++P T   N+Q V + CGRPPRY+SC+G KR     E C V  R
Sbjct: 66  ML-LDFQNLQTPSTNNPNRQSVPE-CGRPPRYDSCIGEKRSISNPENCDVRNR 112

BLAST of CsGy3G020535 vs. ExPASy TrEMBL
Match: A0A0A0KW62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.68e-12
Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 0

Query: 2   AALSTPSIGTIILLLLLIP--SGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 61
           A L+ PS+  +I +LLL P  S   +NDT  S  C+S+  + C LV D     EF+M +E
Sbjct: 11  ATLTMPSMAFLITILLLNPIISNAGMNDTE-SKWCDSTGLENC-LVGDLNSHSEFLMLTE 70

Query: 62  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115
              ML   +  +++P    ANK+ V D C RPPRY+SCLG KR     E C+   R
Sbjct: 71  SSGMLVDQFLTFQTPKANDANKESVPD-CSRPPRYDSCLGSKRSIPNPEPCSTLNR 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN57776.11.23e-80100.00hypothetical protein Csa_010194 [Cucumis sativus][more]
KAA0032826.12.23e-4572.03hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa] >TYK3038... [more]
XP_022143304.17.83e-1339.66uncharacterized protein LOC111013208 [Momordica charantia][more]
KAA0042447.13.20e-1238.94hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa] >TYK0350... [more]
KGN53798.11.17e-1140.52hypothetical protein Csa_014747 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0LCI85.94e-81100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1[more]
A0A5D3E3B81.08e-4572.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CNY13.79e-1339.66uncharacterized protein LOC111013208 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A5D3BZL11.55e-1238.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KW625.68e-1240.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020535.1CsGy3G020535.1mRNA