CsGy3G020280 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G020280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	30S ribosomal protein 3, chloroplastic-like
Location	Gy14Chr3: 16917261 .. 16925904 (+)
RNA-Seq Expression	CsGy3G020280
Synteny	CsGy3G020280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTATCCACATTCCATTAAGAAGAAATGCATATTGCACTTTTTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTTCTCTCTATCTCCGAACGCACTCTCTATGATGTTATCCATGGCAGTTCAACTTCAGCCCAATGTTAATTTCTGTTTCAATACCTCCAATTTCACTGCCCAAACCGCTTCAAAACCGTTCAAACTTCCTTTTGCTGTGAGGCAAAGAACCACCGCTTCTTCCTGCATTCCCAACTTCCATTCTGTTTTTGGCTTGCAATTGAGGCGCCAGAACTTCAGAACTCAAGAAATCTCTGCTTCTGCTGCGCCCATTGAAGCTGTCGAAGCTGCCGAAGCTGCTTCAGAATTGCTTGTTGCTGATGACTCCGACTCCGTCTCTTCTCCTGTTAAGGAGGTCTCTCTCTCTCTCTTCTCTCTCTTCCTCCCTTTCTATCTCGTCTGATTGCTCCGTTTAGTTTCGTTCGTTTTCAGCAAGTTGAAAAATGAATCCTTGTTTTTTCTGCTGGATGGAGATCGTCTGATATTTGGGGGAGAGCTACCGAAAGTTTGGTAAACAAACAGTACTGTCGTTTCTTAGTTAGTTGAGAGGGGCGGATTTATTGGTGAATTTGGTTACTTGAAAGCTCGTTCTATTTCTAATTTTTTTTTTTTGTTTCTTTTTTTTAAATGTTCTTGCTTTCATTTCAGTTTTTGGTTCTTTTCAAAGAAACTGCTTGAATTCATTGAGATCCTATAGCTTACTGTGGCTATGTATTGTACATTGTTTGTTTGATCGAGTAGTGTTGTTTTCTCTATGAACACATGGTAGAAATTCTGGTATAAGGAATTACTAATACTTTGTGAGTAACTTGGAAGATAGGTTCTAACAAGAATGTTGATGTTGATTTTCATGGATCCCTAAAAGTTTATAATTTGAAATGAACGTATTGAAGAAGATCAATTCTCACACAGTAGTTAAATGATTGATGCAGCATTAACATTAAATTGTTAATTTTATTAATTCCAAATTGAAGTTTGAATAAGTAATGAATTAATACTCCTTGTTGGCTGAATTGCTATTTTCTCTAGGTTTCTGGTTATATCTGTGTTATTGTGATTTGAATTGGGACGTGGTTGGTTTTTTGAATGCTCATTTTATTATTGCCTTGCCTTGAGCATTTATTTAGGTTTGGTTTTGGTTTTTTGTTGTTAGGTTTGAGCATTGCTTTAATTGTTAAACTTTATCACCTTGTGGCTGGATTTGGATGTCTCTTCACCAAGTTTTGGATATTGTATTTGGAATTTGATTTTTTTAGCTAAATTTACGTGATATTTTGCTGCTTTTCGAACAATACTCTAGTTTCGTTTTGTGAGATTTCAGTTTCATCAATATTTCAGTTTAAATTTCAATTCGATAAAGTTATAACTTAGCCTCTTAGGCTAATGTATATGTAGTTCTTTTCTTTTCTTTTCCCCTCCCTTTGTCCATACCTTAAGGGGATGCTTTTTGCTTGCTGATTAACCTAGGTTTAGTTTGGATTTGCGTAATCTACCCCTAGAATTTGTAAAGGAATGAGTTGTAGAAATCTTGGTATGTGTAAAATATGTTTTGTTTAAGTTCAACTATAAAACCTGTGGTTTCATTTTGTTATATGTATGTAACCTTTGTTGTTGTAGCTTCTGGAATTAGCTAACTGTTGACCTGTGGGATAAGAATCGTAATTTGGATAAATAAGCTCATGTACTAAAGTTTAGTCATACCTCTTTGCTATCTTAACATTCAGCTACACAAATACAACTTGTGTGCTAATCAAGTCCTAAAGATATCTTTTATGTTACACTAAATAATATCTAGAACAACTCTAAGCATATGTAGTTTTTTAACAAGTATTTACTATAAACAAACTCATAATTTCCCCACTTGGCTTTATTTTAACCATATTAGGAGTCTTAGAGGTAATCTCCCTCCCTTTGATAAGATGATATCAACATCAAATACTGAAACTGACTGTACAACAGTGAAAATCTTTTTATTCTCATTATTTTTGTGAAACACAATTAAACAAGTACTGGTATTTTGATTTTATAGTTTCCTTTTGCTTTTACAAATGAAAACTTGAGCAAAATAGATTTATCAGGAAGCCCTTCTCTGGCAAATTATACATTTTGACGATTCATTTTTTAATGTTATAGAAACTGGGAGTGGTTGTGAAACCGATGGAAAAGCCAAGGCTTGTGCTAAAGTTTATATGGATGGAGAAGAACATTGGTATTGCACTTGATCAAATGATTCCTGGTCATGGAACTATTCCTCTTAGCCCGTACTACTTTTGGCCTCGGAAAGATGCATGGGAAGAACTCAAAGTCTTACTTGAGAGCAAGCCCTGGATTTCTCAAAAGCAGATGATTATTCTCCTTAATCAGGCAACTGACATCATCAATTTGTGGCAGCAGGGTGGAGGCAACCTGGCTTAAGCTCCAATGTAAAAAGTTTCAAATTTTTTTGATAGTGGTCTTAGATTGTGACTATTCTTGAATCGTACGGCTGTTCAGATGTCCTTTTTCGTATATTCTGAAGTAATTTTATAATTTATAAATGACTCATCTTTTGTTGTATATTATGTTGGTTGTGTAACCCATCTACAGTTCACATTTTCCGTTGAAAGTTTTGTTCATATTCAATATGAAAACCTATTATTTTATGCATTTAGCTGGGGAAGTTTCTGAGAAGTTTAAGGATAATTACATGAAACATTTAAGCTTTTTTGTTGTAATAATTTGAAGCTGAAATGTTATGTTTAGCTCATAGTTTAAACATGTCTGGGTTTCTAAAGCCTGAAGTTGGGAAATAAAAAAGGTTATTTTCTAAAGCAAATATTTGTGTAACAATTTTGTAGGATTAACAGATCCATAATTGTTAATCCCATAATCTGGTATGAATAACTCACACATCAATTATAAGTTTGACTCCTAACCTGAAGTAGAAGTTACATAAACCTCAACCTTTAAAGACACTTGTCTTGTAAGCTTTCTTCCTTCAAGTAAATTTTGCTTTTTGTTTTTGTTTTGTTTTGTATTTTTGTTCAATTTTCATTTGTATACAAGATTTTGTTAGAATACTGAATTTAAGAGAACTTGGCAATATCGAAAATTTCTTTGCTATCTATCCTAGTATTAGTTACATTATTTTCAACCATATAAATGTATTGTACTCGAATAACAATCTCTGAAAAAATAATAATGTTTACATGTCTGTCCTAGCAAAATTGTTCGTACCCTTTTATTGAGAAATAAGAAACTACTGATCGTATACTGGGTCCAAAAGTTTCACTACACGTTTCCTTCCAATCTAGATGTGACTAGCCAATAAATTTACTTTGATTCGTGAACTCTTATATCTTCTTCTGAAATTTCTTTTCCACTGGCAACTTCATTATCTGTATTGGTTATCTTGTCGCCGTCTGACTCGTTGTAGAAGATTGAATTTGGTTTTGATGATTGCTCCTTCATATTGTTAACATCTGAATCTTTTAGAACAGAGGATGTGCTTTCTTTGGCAGGTTCTTTTGGTAACTCTTCTTGATTGGTTTCTTCCATGTCAGCATCTTCATATTGAGAACTGCAACTTTCAAGTTCAACAGGACAAATCTTTTCAAAACTAAACCTGTCGTCTGAATAGTCAATCTTACAGGAAGATATGCTTTCTTCTTTTGTATTAAGCTTAGGTTCATAAGAACTATTCAGATCTGAGCCTTTTCCATTCTTTTGTAGATGAGAGCCATCTTCATGATCTGAATCAATATCCTGTGATTCGGACTTTGAAAGGTTGATTGCAGCTTTAGCTGCTAATGCTGCATAAGCTGCCGATTGGAAGGGTTCTTCAGTGGCACTAGCTACATCTTTAAACTTCTTTGATTTCACTAATTCCGATGCCATCTTTTCACTTGTAATAACTTCATGTAGATCATCTGTGGTGTTTGTGACTTCAGGATTATACAAATCTGCTTCTTTCTTGATTTCCAACTTTTGGTTTTGCTTTGCCTGCAGTTAACAGATGAATTTTTTACTAAAAAGTTAACTTAGGAAGTAGAAGCACTCATTTTCTATCAAGGTGAGGAACATACGGCTCTTTGGTGACACTTTTTCCTCTTCTAATCGCTTTTTCTTAGTTTAAAATAAAGCACCTTTCCATTCAAGCTTATATTTTTTAGTTAGCAATTGGCGCTCCCTTATGTAATCACCTTTTTTTGATGTTTGGGGCTCTTCACTATCATATGAATGAAATGTTTCTTTTCACTATATTAAAAAAAAAAAAAGATATTTCCTCACCTTGATGATTATTGGTGATTCTTCCTCTAAATGGAGAGGAATGCCATTTTCTGAAGCAATTTCCTTTAGCACTTTCAGTTTAGTTTCGGCACTGGGCTGTTTTGTTGAAAACTTTTGAATCATCTGTAATATGGAAACTGTGGTTATTAAGTGGAGATTATATATTCGAACAACTAATTCGTTTCTTGCAGTTGGTAAGTATCAAACTCACCTTGGTACTAACACCACAGTTGTTGCGTAAATCAATGGCACTGCTTGCAAACTCCGCACCAAACTTCAACTCGAAAATCCGACGAATCTCTTGAAGTTCTGGAAACTCTCCGCACCTTGAAGCTGCAAATATCAGACTCGATATCGCCTCCTTAACTTCGCCAGGGCATTCCCTGCATTTAAGCCGAAAGAGAATCAGAAAAGGTTTCAAATCTTTTAAAAGGCCTGCATCCAAAGTTGACAAAAATGACATAGTGAAATTCTAGGAAAGAAAGGTGACCTACTTGTTCATCTGAAGAAGAGCCACCTTTTCTACGAGAAGGCAGCAGTAATCCTCTATCATTCCAAGAGCATCCAACATGTTATTCTCCTTGATCACAATCTCAACCTGTTCATTAACGTTCACATCCAAGCTCAGCGGTTGGAAAAAAAGAAAAAAATGAGAAGGGGCTGAACTATAGAGTTCTGAAAGAGAGAGAAAAAATTTACTCTAAGCTGAGCACGATGTTGGTAACTAAGATTCAACAGTTGAAGAACATCGGCACGAGCTAGGGAGCAACGGGCGCGGTGGTGGTTTTTTAGGATGGAAGTCCTAGAAATGGCCATATTAGCAAGGGTCTTAAACTTGGAAGCCTTCAAATATCTGTTCCTTCCCAGTAAAGCATCCAGTTTCCTTCCCATGATGGAAAAACCTTAAATTCTGTTTGCTGCTTGTTTGCCTGTGAAAAGCTCTTGAATGAACTACTTTTTGGTTGTTGGTTGCGGACATTGCCTGTGTTTTATAGGGAAGATGCATGATTAACTATTTTACCAACATTCACATGCATAATTTATTTATTTTTTCCTTAAAGCAGGTCAGAGAATTGGCTCCCATTATTGACTTTGAAATAGGCGTTGATTAGTGAAATTTCCAGGCTTTGAATGGTTCAAACAGAATTGACTATGGAGGTATTAGCAGGCGGCTTTGGTCTGGAAAATGACATTACTTGGAAATGGGAAGCTTCTGAGGTATTATGTCCACTTCTAGTCATTATGAATTACTTCTCCTTTAATCAACTCATTTAATTGGTGAAAGGTGCTTTCTTTTTTCAAATACTTTTTGTTCTGCAAAAACGTTCAAATAGAATTATTCAGTTTTCTGTTATATTTTGTTGTTATGTGCGTTGAATGGGTTTTAAAAGAAATATTTAATTAGTTGAGTTTGGGAGTGATTTCAGTATAAAATCATTTTTGTCATGTCTTTCTCTAAAATTGTGATCTTTGATTATCATGAAAAAGTGATTTCGGATCAATCACTCTAAAGGTGGTTTTTGTTATGGGAATGTCACTTGTGAGTGATTTCTTTTTTTTACAAAGACTATTATTTTATATTGAAAAAATATTCTCCTATTTCACTTTATTTTGTACTAAAAATTTTAGAATATATAATAGATCTATTTTGTTAAAATTTCTATTATCCTACTAACACTCTTAAACATTGCTTTCTATTGATCGTCAACAAAAGTTTTACTTAAAGTGACATTTATTTGTACCTCAGTTTAATGACTTTGATTAGGGGATTTAATTGCAACCATGTCTATTACACTATTTGAGGGCTCATCCTATTAAATAAAACCAAGGCTGATCCATATATATCTCTAGCCACCTTTTTCTTCTCTTCTTTTAACCATGCCAAAGTTGAAAAACTCTCTTTCCTAGAAAATACTTTTGAAAAAGGTTTAGTAGTTCACGTCGTCGTTAATTGAAAAAATTAATTGTTAACTAATAACTGAAGGTAAGCTAATTTATGTTTGAAAAGAAAAGTTGGAGTTGGTGTGGATTTGGCTTAAGATAGTATGAGATTTGGTTGATAATGGTAATGTCAAAAGTAGGATGAATCTATGTAACAAATATAGTTATTATAGTTATTAGATGGTAGGGAAGGGAAGGGAATAAATGGGGCGAAGAGGTGTGGGGAGAAAGGAGAAGGTTGAGAAATGGGCCCAATTCGGGTATCCCACACGGAAACATTCTGTCTTTTATTGTCAGGGGTTGTTCCTATACAACAAATAAAAAGAAAAAGGCAGGCAAATTTCCCTATTCACAAATCCATTGAAAAAAAATAAAGGTGAGATGATATTGACTGGCTTGTAATATGATAAGATTCAATGGGTTTAAAAATTGAAGTTTTCTTGCAAAAGAAATGTTCATTTGAGAGAAAATTGTTCATGATTTTGTCGAAGTCTACGTCTTTGATTTTGTAAAACCCATTTTCGTACTAGATGTAGTAGAAAGATTTGTCCACTTTGCAAATCTCCACTTCCACTTTCTGTTTGAGTGTGACTGTAGAACTTGTTGGAAATTGGCTGAAGAAGATTCTTAAAAGAATAGTGGAAGGACGGAGCGAGAAGAGAGAGAAGGGAGATACAACAAACCTCCTTTCTGGGTGTGTAAATTCTCAACCAAATCTGTTTAATTCAAAGAACCATGTTTCATACCCAAATTACAATGAGTTTTAATCCTATTTTAAGCTACAAAACTTACCTTAGCCACTCGCGACCTGGTGAGATGACTGTCACACCCTTCAAATTCACCTACTTAAATTGAGATGAGATGCAACTAGCAAGAGAAGTGTCAACAAGGTGACACTCCACACCAAGAACGCAACTTGAATGATTCAAGGCATAATTTTCCTACTCCCTGCTTAGCTTATCACTTAGATGCTTTTAGCACATTTGAAAATTTAAGTTGAACGCTAAAAATGCTCAATGTGATGGATAACAATGAATGCACAAAAACTTCTCATTTTATTTACTCAAACACCCGTTTCAACTTTACAACTTGACACTAAATTTTAACTTATTACCATACGGTTGCTTCTTGTCATTCGTCAGCTTACCTCTACCCTACAAGTTATGCTAGGTGTTTGTTAACTTTCTATTAGAGTTCGGCAAGAAAGTACCGCATAACTATAATACTCCCGAACACACGTTATTAAGTGATCACGTAGAAACACATTTGGGCTCTTGGTGAACACGAAGGAAACATCCTAAGAGAGTCGGGCTGACTCTGTCGAATCACTCATAAAATCTAGCTACACATGCATAAGTAGGTGGTGATTTCGAGGGACACCCATATGATACGACTTTAACCGACAAAGTTAATAGAACAACATAGCCTATACATGTAGCATATCATAAATATCATATCTCAACCATAACCTCAATCATTGGAGATCTCAATCATAACATATCTTATTCATAAGATATCATGGTCGTCACATATCTCACTCATGTGTATCTCAGTGTCTATGTAGTCATCAATCAGTTATCCCTAATAGTCACATCATGCATTATAATTACGATAATGCATAATAAGGTAAAACATACATGCACGACCTTTATTCTAATGTTGGGTCCCCAAAATAATCGTGCAATCAAAACAGGTCTTAAGTAGTAAAGGAAAAAACTAAAATTAATAAAATTATCGGTTGATTATTGAACCCAAAATCAACTCAATTCAACTTACCCAAAGTTGAGGTTGAATTCCAGTTCAACCTTGGTTAAGAGAAAATTCCTCGAAGTTAATTCTTTTAATTTAGCCTATTACCCTTCAAGCAAAAAAAATCCAAATTAACTTAATTAAGGTCCAAAAATATAACAATTGACGTGTATATCTGACACCATCAAAACTCATCCCAAATGGCTCAATATAGGTGAAGAGAGGGCAAAATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGACGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAACAAAGATGGAGCTTAGCGGCGACAAAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGAACGGAGAAGAAAAGGGCGACAACTAGGTTTTCAAGAGGAGGAAGATCATATAGTTTCCTTCTTTT

mRNA sequence

ATCTTATCCACATTCCATTAAGAAGAAATGCATATTGCACTTTTTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTTCTCTCTATCTCCGAACGCACTCTCTATGATGTTATCCATGGCAGTTCAACTTCAGCCCAATGTTAATTTCTGTTTCAATACCTCCAATTTCACTGCCCAAACCGCTTCAAAACCGTTCAAACTTCCTTTTGCTGTGAGGCAAAGAACCACCGCTTCTTCCTGCATTCCCAACTTCCATTCTGTTTTTGGCTTGCAATTGAGGCGCCAGAACTTCAGAACTCAAGAAATCTCTGCTTCTGCTGCGCCCATTGAAGCTGTCGAAGCTGCCGAAGCTGCTTCAGAATTGCTTGTTGCTGATGACTCCGACTCCGTCTCTTCTCCTGTTAAGGAGAAACTGGGAGTGGTTGTGAAACCGATGGAAAAGCCAAGGCTTGTGCTAAAGTTTATATGGATGGAGAAGAACATTGGTATTGCACTTGATCAAATGATTCCTGGTCATGGAACTATTCCTCTTAGCCCGTACTACTTTTGGCCTCGGAAAGATGCATGGGAAGAACTCAAAGTCTTACTTGAGAGCAAGCCCTGGATTTCTCAAAAGCAGATGATTATTCTCCTTAATCAGGCAACTGACATCATCAATTTGTGGCAGCAGGGTGGAGGCAACCTGGCTTAAGCTCCAATGTAAAAAGTTTCAAATTTTTTTGATAGTGGTCTTAGATTGTGACTATTCTTGAATCGTACGGCTGTTCAGATGTCCTTTTTCGTATATTCTGAAGTAATTTTATAATTTATAAATGACTCATCTTTTGTTGTATATTATGTTGGTTGTGTAACCCATCTACAGTTCACATTTTCCGTTGAAAGTTTTGTTCATATTCAATATGAAAACCTATTATTTTATGCATTTAGCTGGGGAAGTTTCTGAGAAGTTTAAGGATAATTACATGAAACATTTAAGCTTTTTTGTTGTAATAATTTGAAGCTGAAATGTTATGTTTAGCTCATAGTTTAAACATGTCTGGGTTTCTAAAGCCTGAAGTTGGGAAATAAAAAAGGTTATTTTCTAAAGCAAATATTTGTGTAACAATTTTGTAGGATTAACAGATCCATAATTGTTAATCCCATAATCTGGTATGAATAACTCACACATCAATTATAAGTTTGACTCCTAACCTGAAGTAGAAGTTACATAAACCTCAACCTTTAAAGACACTTGTCTTGTAAGCTTTCTTCCTTCAAGTAAATTTTGCTTTTTGTTTTTGTTTTGTTTTGTATTTTTGTTCAATTTTCATTTGTATACAAGATTTTGTTAGAATACTGAATTTAAGAGAACTTGGCAATATCGAAAATTTCTTTGCTATCTATCCTAGTATTAGTTACATTATTTTCAACCATATAAATGTATTGTACTCGAATAACAATCTCTGAAAAAATAATAATGTTTACATGTCTGTCCTAGCAAAATTGTTCGTACCCTTTTATTGAGAAATAAGAAACTACTGATCGTATACTGGGTCCAAAAGTTTCACTACACGTTTCCTTCCAATCTAGATGTGACTAGCCAATAAATTTACTTTGATTCGTGAACTCTTATATCTTCTTCTGAAATTTCTTTTCCACTGGCAACTTCATTATCTGTATTGGTTATCTTGTCGCCGTCTGACTCGTTGTAGAAGATTGAATTTGGTTTTGATGATTGCTCCTTCATATTGTTAACATCTGAATCTTTTAGAACAGAGGATGTGCTTTCTTTGGCAGGTTCTTTTGGTAACTCTTCTTGATTGGTTTCTTCCATGTCAGCATCTTCATATTGAGAACTGCAACTTTCAAGTTCAACAGGACAAATCTTTTCAAAACTAAACCTGTCGTCTGAATAGTCAATCTTACAGGAAGATATGCTTTCTTCTTTTGTATTAAGCTTAGGTTCATAAGAACTATTCAGATCTGAGCCTTTTCCATTCTTTTGTAGATGAGAGCCATCTTCATGATCTGAATCAATATCCTGTGATTCGGACTTTGAAAGGTTGATTGCAGCTTTAGCTGCTAATGCTGCATAAGCTGCCGATTGGAAGGGTTCTTCAGTGGCACTAGCTACATCTTTAAACTTCTTTGATTTCACTAATTCCGATGCCATCTTTTCACTTGTAATAACTTCATGTAGATCATCTGTGGTGTTTGTGACTTCAGGATTATACAAATCTGCTTCTTTCTTGATTTCCAACTTTTGGTTTTGCTTTGCCTGCAGTTAACAGATGAATTTTTTACTAAAAAGTTAACTTAGGAAGTAGAAGCACTCATTTTCTATCAAGGTGAGGAACATACGGCTCTTTGGTGACACTTTTTCCTCTTCTAATCGCTTTTTCTTAGTTTAAAATAAAGCACCTTTCCATTCAAGCTTATATTTTTTAGTTAGCAATTGGCGCTCCCTTATGTAATCACCTTTTTTTGATGTTTGGGGCTCTTCACTATCATATGAATGAAATGTTTCTTTTCACTATATTAAAAAAAAAAAAAGATATTTCCTCACCTTGATGATTATTGGTGATTCTTCCTCTAAATGGAGAGGAATGCCATTTTCTGAAGCAATTTCCTTTAGCACTTTCAGTTTAGTTTCGGCACTGGGCTGTTTTGTTGAAAACTTTTGAATCATCTGTAATATGGAAACTGTGGTTATTAAGTGGAGATTATATATTCGAACAACTAATTCGTTTCTTGCAGTTGGTAAGTATCAAACTCACCTTGGTACTAACACCACAGTTGTTGCGTAAATCAATGGCACTGCTTGCAAACTCCGCACCAAACTTCAACTCGAAAATCCGACGAATCTCTTGAAGTTCTGGAAACTCTCCGCACCTTGAAGCTGCAAATATCAGACTCGATATCGCCTCCTTAACTTCGCCAGGGCATTCCCTGCATTTAAGCCGAAAGAGAATCAGAAAAGGTTTCAAATCTTTTAAAAGGCCTGCATCCAAAGTTGACAAAAATGACATAGTGAAATTCTAGGAAAGAAAGGTGACCTACTTGTTCATCTGAAGAAGAGCCACCTTTTCTACGAGAAGGCAGCAGTAATCCTCTATCATTCCAAGAGCATCCAACATGTTATTCTCCTTGATCACAATCTCAACCTGTTCATTAACGTTCACATCCAAGCTCAGCGGTTGGAAAAAAAGAAAAAAATGAGAAGGGGCTGAACTATAGAGTTCTGAAAGAGAGAGAAAAAATTTACTCTAAGCTGAGCACGATGTTGGTAACTAAGATTCAACAGTTGAAGAACATCGGCACGAGCTAGGGAGCAACGGGCGCGGTGGTGGTTTTTTAGGATGGAAGTCCTAGAAATGGCCATATTAGCAAGGGTCTTAAACTTGGAAGCCTTCAAATATCTGTTCCTTCCCAGTAAAGCATCCAGTTTCCTTCCCATGATGGAAAAACCTTAAATTCTGTTTGCTGCTTGTTTGCCTGTGAAAAGCTCTTGAATGAACTACTTTTTGGTTGTTGGTTGCGGACATTGCCTGTGTTTTATAGGGAAGATGCATGATTAACTATTTTACCAACATTCACATGCATAATTTATTTATTTTTTCCTTAAAGCAGGTCAGAGAATTGGCTCCCATTATTGACTTTGAAATAGGCGTTGATTAGTGAAATTTCCAGGCTTTGAATGGTTCAAACAGAATTGACTATGGAGGTATTAGCAGGCGGCTTTGGTCTGGAAAATGACATTACTTGGAAATGGGAAGCTTCTGAGGTGAAGAGAGGGCAAAATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGACGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAACAAAGATGGAGCTTAGCGGCGACAAAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGAACGGAGAAGAAAAGGGCGACAACTAGGTTTTCAAGAGGAGGAAGATCATATAGTTTCCTTCTTTT

Coding sequence (CDS)

ATGATGTTATCCATGGCAGTTCAACTTCAGCCCAATGTTAATTTCTGTTTCAATACCTCCAATTTCACTGCCCAAACCGCTTCAAAACCGTTCAAACTTCCTTTTGCTGTGAGGCAAAGAACCACCGCTTCTTCCTGCATTCCCAACTTCCATTCTGTTTTTGGCTTGCAATTGAGGCGCCAGAACTTCAGAACTCAAGAAATCTCTGCTTCTGCTGCGCCCATTGAAGCTGTCGAAGCTGCCGAAGCTGCTTCAGAATTGCTTGTTGCTGATGACTCCGACTCCGTCTCTTCTCCTGTTAAGGAGAAACTGGGAGTGGTTGTGAAACCGATGGAAAAGCCAAGGCTTGTGCTAAAGTTTATATGGATGGAGAAGAACATTGGTATTGCACTTGATCAAATGATTCCTGGTCATGGAACTATTCCTCTTAGCCCGTACTACTTTTGGCCTCGGAAAGATGCATGGGAAGAACTCAAAGTCTTACTTGAGAGCAAGCCCTGGATTTCTCAAAAGCAGATGATTATTCTCCTTAATCAGGCAACTGACATCATCAATTTGTGGCAGCAGGGTGGAGGCAACCTGGCTTAA

Protein sequence

MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRRQNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNLA*

Homology

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BLAST of CsGy3G020280 vs. ExPASy Swiss-Prot
Match: P82412 (30S ribosomal protein 3, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP3 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-50
Identity = 118/195 (60.51%), Postives = 135/195 (69.23%), Query Frame = 0


Query: 2   MLSMAVQLQPNVNFCFNTSNFTAQTAS-KPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 61
           MLSMAV  QPN+N     S + +   S KPFK P     +   SS  P+F      QL++
Sbjct: 1   MLSMAV--QPNINAIAKPSIYQSPKLSLKPFKTPAFANPKPFFSS--PSFS-----QLKK 60

Query: 62  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 121
           +N      S   AP    + A   +E+ + DD        KEKL V+VKPM+KPRLVLKF
Sbjct: 61  KN----NWSLFVAPETISDVAIMGNEVDIDDD----LLVNKEKLKVLVKPMDKPRLVLKF 120

Query: 122 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 181
           IWMEKNIG+ALDQ IPGHGT+PLSPYYFWPRKDAWEELKVLLE+KPWISQKQMIILLNQA
Sbjct: 121 IWMEKNIGLALDQTIPGHGTVPLSPYYFWPRKDAWEELKVLLENKPWISQKQMIILLNQA 178

Query: 182 TDIINLWQQGGGNLA 196
           TDIINLWQQ GGNLA
Sbjct: 181 TDIINLWQQSGGNLA 178

[Close]

BLAST of CsGy3G020280 vs. ExPASy Swiss-Prot
Match: Q9SX22 (30S ribosomal protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g68590 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.5e-40
Identity = 80/114 (70.18%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 83  AASELLVADDSDSV--SSPVKEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGT 142
           AA E L A+    +  S    ++   VVKP EK R+VLKF+WMEKNIG+ LDQ +PGHGT
Sbjct: 50  AAPETLTAETVTGIDTSDNTPQQTIKVVKPDEKSRVVLKFVWMEKNIGLGLDQHVPGHGT 109

Query: 143 IPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNL 195
           IPLSPY+FWPRKDAWEELK  LE+KPWISQK+MIILLNQATDIINLWQQ GGNL
Sbjct: 110 IPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNL 163

[Close]

BLAST of CsGy3G020280 vs. ExPASy Swiss-Prot
Match: Q9LFV0 (30S ribosomal protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g15760 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 91/193 (47.15%), Postives = 122/193 (63.21%), Query Frame = 0


Query: 5   MAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRRQNFR 64
           MAVQ   + +F F T++ + + +SKP      +   + ++   P+        L    + 
Sbjct: 1   MAVQANQSASFGFRTASPSQKLSSKP------IAHISLSTKLKPSSRP----SLSCSTWN 60

Query: 65  TQEISASAAPIEAVEAAEAASELLVADDSDSVSSPV--KEKLGVVVKPMEKPRLVLKFIW 124
             +I A  + I     A   S L  + +     SP   K+K+ V+VKP+EKP++VLKF+W
Sbjct: 61  QGQIPARHSCINPGIFAYPPSNLTFSHELPESESPPLGKKKMRVLVKPLEKPKVVLKFVW 120

Query: 125 MEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATD 184
           M+K+IG+ALD MIPG GTIPLSPYYFWPRKDAWEELK LLESKPWIS+   + LLNQATD
Sbjct: 121 MQKDIGVALDHMIPGFGTIPLSPYYFWPRKDAWEELKTLLESKPWISELHRVFLLNQATD 180

Query: 185 IINLWQQGGGNLA 196
           IINLWQ  GG+L+
Sbjct: 181 IINLWQSSGGDLS 183

[Close]

BLAST of CsGy3G020280 vs. ExPASy Swiss-Prot
Match: O48609 (30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSRP3 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 97/178 (54.49%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 23  TAQTASKP-FKLPFAVRQRTTASSCIPNFHSVFGLQLRRQNFRTQEISASAAPIEAVEAA 82
           T   AS+P   LP   R  T +SS      S+  L+ RR   R+     +AA   AVEA 
Sbjct: 11  TPALASRPRVSLP---RPSTPSSS-----SSLVHLKSRRPPLRSLRSLTAAAAAAAVEAG 70

Query: 83  E----AASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPG 142
           E       +  +  + D+ +    E+  V V   + P LVLKFIWMEKNIGIALDQM+PG
Sbjct: 71  EPYFGLGDDEPLGGEGDAEAVVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPG 130

Query: 143 HGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNLA 196
            G+IPLSPYYFWPRKDAWEEL+  LE K WISQKQMIILLNQATDIINLWQQGGG+L+
Sbjct: 131 VGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQGGGSLS 180

[Close]

BLAST of CsGy3G020280 vs. ExPASy Swiss-Prot
Match: P51351 (Probable 30S ribosomal protein 3, chloroplastic OS=Porphyra purpurea OX=2787 GN=ycf65 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.8e-22
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 115 RLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMI 174
           +  LK +W+E NI IA+DQ++ G+GT PL+ Y+FWPR DAWEELK  LESKPWI+++  I
Sbjct: 3   KFTLKVLWLENNIAIAIDQIV-GNGTSPLTSYFFWPRNDAWEELKAELESKPWIAERDRI 62

Query: 175 ILLNQATDIINLWQQGG 192
            LLN+ T++IN WQ+ G
Sbjct: 63  ELLNKTTEVINYWQEEG 78

[Close]

BLAST of CsGy3G020280 vs. NCBI nr
Match: XP_004145640.2 (30S ribosomal protein 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 377 bits (967), Expect = 3.49e-131
Identity = 191/195 (97.95%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 60
           MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFH+VFGLQLRR
Sbjct: 22  MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHTVFGLQLRR 81

Query: 61  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120
           QNFRTQEISASAAPIEAVEAA   SELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF
Sbjct: 82  QNFRTQEISASAAPIEAVEAA---SELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 141

Query: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180
           IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA
Sbjct: 142 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 201

Query: 181 TDIINLWQQGGGNLA 195
           TDIINLWQQGGGNLA
Sbjct: 202 TDIINLWQQGGGNLA 213

[Close]

BLAST of CsGy3G020280 vs. NCBI nr
Match: KGN57759.2 (hypothetical protein Csa_011376 [Cucumis sativus])

HSP 1 Score: 370 bits (951), Expect = 3.95e-129
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 5   MAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRRQNFR 64
           MAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFH+VFGLQLRRQNFR
Sbjct: 1   MAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHTVFGLQLRRQNFR 60

Query: 65  TQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWME 124
           TQEISASAAPIEAVEAA   SELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWME
Sbjct: 61  TQEISASAAPIEAVEAA---SELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWME 120

Query: 125 KNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDII 184
           KNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDII
Sbjct: 121 KNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDII 180

Query: 185 NLWQQGGGNLA 195
           NLWQQGGGNLA
Sbjct: 181 NLWQQGGGNLA 188

[Close]

BLAST of CsGy3G020280 vs. NCBI nr
Match: XP_008461583.1 (PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis melo])

HSP 1 Score: 357 bits (915), Expect = 1.40e-123
Identity = 181/195 (92.82%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 60
           MMLSMAVQLQPNV+FCFNTSNFTAQ ASKPF+LPFAV+QRTTASSCIPNFHSVFGL+LRR
Sbjct: 1   MMLSMAVQLQPNVHFCFNTSNFTAQPASKPFQLPFAVKQRTTASSCIPNFHSVFGLKLRR 60

Query: 61  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120
           QN RTQEISASA   EAVEAA   SE LV DDSDSVSSPVKEKLGVVVKPMEKPRLVLKF
Sbjct: 61  QNLRTQEISASAVSTEAVEAA---SESLVTDDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120

Query: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180
           IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA
Sbjct: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180

Query: 181 TDIINLWQQGGGNLA 195
           TDIINLWQQGGGNLA
Sbjct: 181 TDIINLWQQGGGNLA 192

[Close]

BLAST of CsGy3G020280 vs. NCBI nr
Match: KAA0063423.1 (30S ribosomal protein 3 [Cucumis melo var. makuwa] >TYK11685.1 30S ribosomal protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 346 bits (887), Expect = 2.34e-119
Identity = 178/195 (91.28%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 60
           MMLSMAVQLQPNV+FCFNTSNFTAQ ASKPF+LPFAV+QRTTASSCIPNFHSVFGL+LRR
Sbjct: 1   MMLSMAVQLQPNVHFCFNTSNFTAQPASKPFQLPFAVKQRTTASSCIPNFHSVFGLKLRR 60

Query: 61  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120
           QN RTQEISASA   EAVEAA   SE LV DDSDSVSSP   KLGVVVKPMEKPRLVLKF
Sbjct: 61  QNLRTQEISASAVSTEAVEAA---SESLVTDDSDSVSSP---KLGVVVKPMEKPRLVLKF 120

Query: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180
           IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA
Sbjct: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180

Query: 181 TDIINLWQQGGGNLA 195
           TDIINLWQQGGGNLA
Sbjct: 181 TDIINLWQQGGGNLA 189

[Close]

BLAST of CsGy3G020280 vs. NCBI nr
Match: XP_038875586.1 (30S ribosomal protein 3, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 335 bits (858), Expect = 7.08e-115
Identity = 173/196 (88.27%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTA-SKPFKLPFAVRQRTTASSCIPNFHSVFGLQLR 60
           MMLSMAVQLQPNVNFCFNTSNFTAQTA SKPF++PFAV+QR+T+SSCI N HSV   +LR
Sbjct: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTATSKPFQVPFAVKQRSTSSSCITNLHSVSASKLR 60

Query: 61  RQNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLK 120
            QNFRT +ISASA    A EAAEAA E LVADDSDS SSPVKEKLGVVVKPMEKPRLVLK
Sbjct: 61  HQNFRTLDISASAT---AAEAAEAAPESLVADDSDSESSPVKEKLGVVVKPMEKPRLVLK 120

Query: 121 FIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQ 180
           FIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQ
Sbjct: 121 FIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQ 180

Query: 181 ATDIINLWQQGGGNLA 195
           ATDIINLWQQGGGNLA
Sbjct: 181 ATDIINLWQQGGGNLA 193

[Close]

BLAST of CsGy3G020280 vs. ExPASy TrEMBL
Match: A0A0A0L9T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271370 PE=3 SV=1)

HSP 1 Score: 377 bits (967), Expect = 1.69e-131
Identity = 191/195 (97.95%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 60
           MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFH+VFGLQLRR
Sbjct: 22  MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHTVFGLQLRR 81

Query: 61  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120
           QNFRTQEISASAAPIEAVEAA   SELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF
Sbjct: 82  QNFRTQEISASAAPIEAVEAA---SELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 141

Query: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180
           IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA
Sbjct: 142 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 201

Query: 181 TDIINLWQQGGGNLA 195
           TDIINLWQQGGGNLA
Sbjct: 202 TDIINLWQQGGGNLA 213

[Close]

BLAST of CsGy3G020280 vs. ExPASy TrEMBL
Match: A0A1S3CF24 (30S ribosomal protein 3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103500153 PE=3 SV=1)

HSP 1 Score: 357 bits (915), Expect = 6.78e-124
Identity = 181/195 (92.82%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 60
           MMLSMAVQLQPNV+FCFNTSNFTAQ ASKPF+LPFAV+QRTTASSCIPNFHSVFGL+LRR
Sbjct: 1   MMLSMAVQLQPNVHFCFNTSNFTAQPASKPFQLPFAVKQRTTASSCIPNFHSVFGLKLRR 60

Query: 61  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120
           QN RTQEISASA   EAVEAA   SE LV DDSDSVSSPVKEKLGVVVKPMEKPRLVLKF
Sbjct: 61  QNLRTQEISASAVSTEAVEAA---SESLVTDDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120

Query: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180
           IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA
Sbjct: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180

Query: 181 TDIINLWQQGGGNLA 195
           TDIINLWQQGGGNLA
Sbjct: 181 TDIINLWQQGGGNLA 192

[Close]

BLAST of CsGy3G020280 vs. ExPASy TrEMBL
Match: A0A5D3CJH0 (30S ribosomal protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00620 PE=3 SV=1)

HSP 1 Score: 346 bits (887), Expect = 1.13e-119
Identity = 178/195 (91.28%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRR 60
           MMLSMAVQLQPNV+FCFNTSNFTAQ ASKPF+LPFAV+QRTTASSCIPNFHSVFGL+LRR
Sbjct: 1   MMLSMAVQLQPNVHFCFNTSNFTAQPASKPFQLPFAVKQRTTASSCIPNFHSVFGLKLRR 60

Query: 61  QNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKF 120
           QN RTQEISASA   EAVEAA   SE LV DDSDSVSSP   KLGVVVKPMEKPRLVLKF
Sbjct: 61  QNLRTQEISASAVSTEAVEAA---SESLVTDDSDSVSSP---KLGVVVKPMEKPRLVLKF 120

Query: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180
           IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA
Sbjct: 121 IWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQA 180

Query: 181 TDIINLWQQGGGNLA 195
           TDIINLWQQGGGNLA
Sbjct: 181 TDIINLWQQGGGNLA 189

[Close]

BLAST of CsGy3G020280 vs. ExPASy TrEMBL
Match: A0A6J1D356 (30S ribosomal protein 3, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016859 PE=3 SV=1)

HSP 1 Score: 305 bits (782), Expect = 1.84e-103
Identity = 163/206 (79.13%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTA-SKPFKLPFAVRQRTTAS----------SCIPN 60
           MMLSMAVQLQPN+NFC NTSNF AQ A SKPF++ F V+QRTTAS          SCI +
Sbjct: 1   MMLSMAVQLQPNINFCLNTSNFPAQNATSKPFQVLFPVKQRTTASYSLSPSSSTSSCIAH 60

Query: 61  FHSVFGLQLRRQNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVK 120
            H   G + RRQNFR  E+SA AA  EAVEAA   SE  V DDSDSVSSPVKEKLGVVVK
Sbjct: 61  SHYFSGFKFRRQNFRNLEVSAPAAATEAVEAA---SESPVVDDSDSVSSPVKEKLGVVVK 120

Query: 121 PMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWIS 180
           PMEK RLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWIS
Sbjct: 121 PMEKSRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWIS 180

Query: 181 QKQMIILLNQATDIINLWQQGGGNLA 195
           QKQMIILLNQATDIINLWQQGGGNL 
Sbjct: 181 QKQMIILLNQATDIINLWQQGGGNLG 203

[Close]

BLAST of CsGy3G020280 vs. ExPASy TrEMBL
Match: A0A6J1K853 (30S ribosomal protein 3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492568 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 7.77e-100
Identity = 157/204 (76.96%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MMLSMAVQLQPNVNFCFNTSNFTAQTA-SKPFKLPFAVRQRTTA--------SSCIPNFH 60
           MMLSMAVQLQPNVNFC NTS F++  A SKP ++PFA++QRT A        SSCI + +
Sbjct: 1   MMLSMAVQLQPNVNFCLNTSTFSSHNATSKPHQVPFALKQRTNALSSPSSSISSCIADVY 60

Query: 61  SVFGLQLRRQNFRTQEISASAAPIEAVEAAEAASELLVADDSDSVSSPVKEKLGVVVKPM 120
           SV GL+LRRQ+F+T ++SASAA  +AV+A    SE  VADDS S SSP KEKLGVVVKPM
Sbjct: 61  SVSGLKLRRQSFKTLQVSASAAAADAVQAD---SESPVADDSLSESSPDKEKLGVVVKPM 120

Query: 121 EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQK 180
           EKPRLVLKFIWMEKNIGI LDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQK
Sbjct: 121 EKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQK 180

Query: 181 QMIILLNQATDIINLWQQGGGNLA 195
           QMIILLNQATDIINLWQQGGG+LA
Sbjct: 181 QMIILLNQATDIINLWQQGGGSLA 201

[Close]

BLAST of CsGy3G020280 vs. TAIR 10
Match: AT1G68590.1 (Ribosomal protein PSRP-3/Ycf65 )

HSP 1 Score: 164.9 bits (416), Expect = 6.7e-41
Identity = 80/114 (70.18%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 83  AASELLVADDSDSV--SSPVKEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGT 142
           AA E L A+    +  S    ++   VVKP EK R+VLKF+WMEKNIG+ LDQ +PGHGT
Sbjct: 50  AAPETLTAETVTGIDTSDNTPQQTIKVVKPDEKSRVVLKFVWMEKNIGLGLDQHVPGHGT 109

Query: 143 IPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNL 195
           IPLSPY+FWPRKDAWEELK  LE+KPWISQK+MIILLNQATDIINLWQQ GGNL
Sbjct: 110 IPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNL 163

[Close]

BLAST of CsGy3G020280 vs. TAIR 10
Match: AT1G68590.2 (Ribosomal protein PSRP-3/Ycf65 )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 108 VKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPW 167
           +KP EK R+VLKF+WMEKNIG+ LDQ +PGHGTIPLSPY+FWPRKDAWEELK  LE+KPW
Sbjct: 74  IKPDEKSRVVLKFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPW 133

Query: 168 ISQKQMIILLNQATDIINLWQQGGGNL 195
           ISQK+MIILLNQATDIINLWQQ GGNL
Sbjct: 134 ISQKKMIILLNQATDIINLWQQSGGNL 160

[Close]

BLAST of CsGy3G020280 vs. TAIR 10
Match: AT5G15760.1 (Ribosomal protein PSRP-3/Ycf65 )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 91/193 (47.15%), Postives = 122/193 (63.21%), Query Frame = 0


Query: 5   MAVQLQPNVNFCFNTSNFTAQTASKPFKLPFAVRQRTTASSCIPNFHSVFGLQLRRQNFR 64
           MAVQ   + +F F T++ + + +SKP      +   + ++   P+        L    + 
Sbjct: 1   MAVQANQSASFGFRTASPSQKLSSKP------IAHISLSTKLKPSSRP----SLSCSTWN 60

Query: 65  TQEISASAAPIEAVEAAEAASELLVADDSDSVSSPV--KEKLGVVVKPMEKPRLVLKFIW 124
             +I A  + I     A   S L  + +     SP   K+K+ V+VKP+EKP++VLKF+W
Sbjct: 61  QGQIPARHSCINPGIFAYPPSNLTFSHELPESESPPLGKKKMRVLVKPLEKPKVVLKFVW 120

Query: 125 MEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATD 184
           M+K+IG+ALD MIPG GTIPLSPYYFWPRKDAWEELK LLESKPWIS+   + LLNQATD
Sbjct: 121 MQKDIGVALDHMIPGFGTIPLSPYYFWPRKDAWEELKTLLESKPWISELHRVFLLNQATD 180

Query: 185 IINLWQQGGGNLA 196
           IINLWQ  GG+L+
Sbjct: 181 IINLWQSSGGDLS 183

The following BLAST results are available for this feature:

BLAST of CsGy3G020280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82412	2.7e-50	60.51	30S ribosomal protein 3, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP3 PE=...	[more]
Q9SX22	9.5e-40	70.18	30S ribosomal protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
Q9LFV0	2.1e-39	47.15	30S ribosomal protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
O48609	2.1e-39	54.49	30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSRP3 PE=2 ...	[more]
P51351	6.8e-22	57.14	Probable 30S ribosomal protein 3, chloroplastic OS=Porphyra purpurea OX=2787 GN=...	[more]

BLAST of CsGy3G020280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145640.2	3.49e-131	97.95	30S ribosomal protein 3, chloroplastic [Cucumis sativus]	[more]
KGN57759.2	3.95e-129	97.91	hypothetical protein Csa_011376 [Cucumis sativus]	[more]
XP_008461583.1	1.40e-123	92.82	PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis melo]	[more]
KAA0063423.1	2.34e-119	91.28	30S ribosomal protein 3 [Cucumis melo var. makuwa] >TYK11685.1 30S ribosomal pro...	[more]
XP_038875586.1	7.08e-115	88.27	30S ribosomal protein 3, chloroplastic-like [Benincasa hispida]	[more]

BLAST of CsGy3G020280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9T8	1.69e-131	97.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271370 PE=3 SV=1	[more]
A0A1S3CF24	6.78e-124	92.82	30S ribosomal protein 3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
A0A5D3CJH0	1.13e-119	91.28	30S ribosomal protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1D356	1.84e-103	79.13	30S ribosomal protein 3, chloroplastic-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1K853	7.77e-100	76.96	30S ribosomal protein 3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CsGy3G020280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68590.1	6.7e-41	70.18	Ribosomal protein PSRP-3/Ycf65	[more]
AT1G68590.2	1.5e-40	82.76	Ribosomal protein PSRP-3/Ycf65	[more]
AT5G15760.1	1.5e-40	47.15	Ribosomal protein PSRP-3/Ycf65	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038447	PSRP-3/Ycf65 superfamily	GENE3D	3.30.390.140		coord: 115..193 e-value: 2.8E-33 score: 115.8
IPR006924	Ribosomal protein PSRP-3/Ycf65	PFAM	PF04839	PSRP-3_Ycf65	coord: 143..189 e-value: 1.1E-26 score: 92.8
IPR006924	Ribosomal protein PSRP-3/Ycf65	PANTHER	PTHR35108	30S RIBOSOMAL PROTEIN 3, CHLOROPLASTIC	coord: 2..195
None	No IPR available	PANTHER	PTHR35108:SF1	30S RIBOSOMAL PROTEIN 3, CHLOROPLASTIC	coord: 2..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G020280.1	CsGy3G020280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups
molecular_function	GO:0003735	structural constituent of ribosome