CsGy3G020240 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G020240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	E3 ubiquitin-protein ligase rnf8-A isoform X1
Location	Gy14Chr3: 16866102 .. 16875684 (-)
RNA-Seq Expression	CsGy3G020240
Synteny	CsGy3G020240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCAAAAGTATTGTTTCTATAATTATTTTCAAAATCCACGATATTAATCCAAAATTTCCTTCCCAATTCCTCTATGTTTTAAAATCCCACAAATTCAAATTTATTTCTAATTTTTCGCGGCAATTTCTTGAGGGTTCGATGGAGGAAGAAGAGCACGAGGAAGACCATGGTCTCGCTAATACAATTCTTTCCTGCCCTAATCGAATTCCCGGTGATTCTCTCTCATTTCATGCATCTGTTTCTACACACTTGCTTTTTCACCAATTGCTAATTATATTCTTTCTAGGGTTTGCCGGAGCTTGTATCCGCTCGATCTTGATAACGTCCTGTTTCAGTCAATATAGTTTTGTAGGGTTTGCAAGCTTAGAATATCTGCTTTCGTTACTCTATTTGTTTCATCCGTTTGATCAGAAAATGAAACTTCTTCTGGAAGCTTTCTATTTCTTAAGTTTCTAGCTGCAACATTAAACTGTGTTTGTGCCTATTTTGTTACTCCATAGATTTCTTTTGCTCTGGGATTTAGTGCTTTGATTTTTGTGACGTCTGTAGGCTGTCCAATTGAAGGCATGGAATCTGTGGTTGTGACTGTTAGTGGCTACCATGGCACAGAAAGATTTAACCTTATCAAGATGATATCTTATACTGGTGCTAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGGTGGGTTTTTTTTTTATTAGTTCTCAATTCAGTCTGAAGTTCACCAATTGCTTTCCAATAAGATGAGTTTTGCGATTATGCATGTGTAAAACAGAACAAGTTTGGAGTTTTGGATGGGGATTTGATGAAACACTTTATGGAGTATACTATTGCAGTATCTATCTGTTATGAATCACTCGTCTGCAATCTTAGGCTAAAAAATGATGTTAATTATTGTCCATTCTTATGGTGATTAGATTTGTTGGGAATTACAAGGGAGGAAATTTGATCTTGCTGAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGGTCCTTACATTCTCCAAAGGTTTTGTCAATTGTTACTTTTTCTAGATTACATTATAGTTTCTTGCAGACATCATCAAGCATTAACATTCTGTCGTGGGGCTTTTGTCCAATTACATTACAACTAGTATAAAGACTTAAGAATGATATATCCATTTTGTGATCCAACAAAAGATTTCTCTTTTCTAACCATCAAGGCAAGGATGGAAAATGTGCAATTAGTAACATTTAATAAACAAATAACAAAAATTGCATGAAAAATATTGAGGGCGAAAATCTACATTTCCAATCAACCCAGAGAAGTGCTGCTTATTTTTATTCATTGCCTATGTTCCGAGTCTTCTTACTTTTTGATGCAACTCTTGCAGTCAAACCCGGAAAGTCTTCTGTTATTTTTTCCCTCGAAAATAAATTATGAAGTCCATCTTTTCATTTCTTGTGTACCTAATCCTGGCAAAATATATAATTTTCTTTTTCACAGTAAATGATAACTAGAATTTATAAATTGTTGACCTTTTGTCTCAGATTATCTGTTCTTCCTTTTATATTCCTTTGCATTTGGTCTGTAAGTATGCATGTCTTTTCTTGAGCTTTCACTAAGGCTCGGTTACATATCAGTTAATTTCCACCATTGCTTTATGGCATATATCCTGTAATTGTTTTATATTTTTTCTCTTTGAATTGTGGATTTTATTCCTTGCAGTGGGCAATCTATAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGGGCTATGTCTCAGCCAAAAAGTATAACCTGCTTTCTGAAAAGTTACACAATTACGGAAATGTTGAAGATCAAAGTATTAAAGACATATGCTCTTTTGGTGATTCAATCTTGCCCCGCTCTTCTTTGCTGGATAAGGTGATTTGAGACATTCCTCTCTTAAGATATGTGCACAAACTTGCTGTTTAAGTGGCGAGAAATAATCAATAAATTATTTTGTTGTAAGTTGTAACTTGAAATTCATATGTCTAGATTAAACTCTTCAGGGAAAATATTAAGTATCTGAATCTTTTAAACGATTTACATTTCCTTTCGTGGTGAGAAATACATTATTTTCTTCACATTCATGACTTTATTGGTTTTCTTGAGTCCAAGTTCAAGTGCCATTCATAAATTATTGTTATCATTATTAATAATATTGTTGTTGTTTTTTTTTTTTTTATGAAAGAAACACCATTCATAGATCTTTGTACATGCTATGATTTGTTTGATATTTAAAATGTCAGGGTTCTCTTTGTAATCAAACTTGGGTATGCTACTTCAACAGTTAGGTTATTAGTTAATTAGTATGGTTAATATCATTGTATTTAAATCCCATGACTTAAGCCTATATGAAAAGAGTGCTATGAGCATAGCTCACCTGGCATAAAGTATGAAGTATTGATGGTCATAAGTTTGAATTCCAGCCTCACATGTTGAACTAAAACAAATCCTACATAGAGTAAGGCTTCCCCTTTTGTACAACTGTTTTTGATCATTAATAAAGTAACAGCCCTAGGGCTTTTCGACTCTACCACCGTTATCGTAAGAGAAAAAAGGAGTTCAATACATGACTAGAGTTAGTGCCTATCGTTAACCCTTTTACTGTCAATCCCATCTAGGATCTGTCCTCTGATTTTAGAAAAAGTGATGACACTGCTCATAAGCGAAAGCACAAAGTGCGGAAGAGGATTTCTAAGCTAGAAGACCCATCAAGCTCAAGTAGCAGAAACCGTTTTGAGGAACCAACTTCTGCTGGTCTTTTTGCGATTGAGGTAAGATATATCATTCTTCTTTCCATCTTACATTTTGAATCTCGTCATTTTTGTCCATGTTGCTATACTTCATAGGACAAAGCCCACTCTTCAATTAAGGTCTTAACCTGTGGTAATATCTTGTACTGGCGAATGGTTTAAATTTAATAAACATCTGTTCTATATTACTAACGTACGTAAATAGTTTTCTTAAATTAAGTAATGTGATCTGGTTCTCCAATTCTAATTGTAGGTCGATGACATGATATCTTTTGATTAATCCTCCAACAATTTAAATTTCTATTGTTATAAAATCCCAATAAATTGGCATGTTCTAATTTTATTCTGAGGTCCACCTACTGACTTTACTGCTTAAAATGCTATGCAAATGTATTAGGCTAACCAAAATTCACCTCCAACAAATGGCAACAAGTAAGAAAGAGCATGGGCTTGCCTTTAAGACATAAAAAATGCTTTCAAGTCTCTGGTAGTAAAAGTGTCAGTAGGTTGATGAGCAGCGGTAATAATATTTAATAACTATCCTTGTGCACAACCTTTCTCTAGAGTGAATCACTTTTCACATGACTTGGGCCTTAAAAAGATTGGATCTAGCAACTAGGATAAATATTATCTTTTTAGGAAACAGAAGAATTAAGGAACACAAGCATCTTCAAATAAGTGTCCAATCCAAGCTAGCTAAGCCCCTTGCTTGAGCTCTTTGTAAGAGCTTTGGAAATTGCATCATGATTCAATAGTTTCACACAATCTGTGGTTGAGAGGTCATCAATACTCTTTTTAGCCCAATCTCGCATGTTTGGAGCAAAGTTTAGTTTTAGTTGAGGATTAGGATTAGAGTTTAAAACAATTCACATGCCATTACTATTCTTTAATTCTAGGGGTATTTGTTTCAAGAGCTGGGAAGTTGGTCGACCAACTTTCGGACATCACCTCTGATGATCATTGCTGGCCAGTCTCCGACTACCACCTCCGGTGACTCCACTGGTAAAATTCTGACAACCAACTTTGGCGGCCATCGCCAACCAACCTTTGGTTGCCACCGATCAACCAACCTTTGGTTGCCACCGATCAACCTTGAAACTTTTATAAATTTTTTAGGGTTTAAGGCTAATCTTTGGTGATCTTCATCGGCCAATCTCTGACCACCACCTCCAGTGACTCCATCGACGAACTTTCAACAACCAACTCTGGCGATCGTCGCCACCAATCAACCTTGAAAATTTTTAATAAAAATATTTTTAGAGTTTAGGCTAGTCTTCAGTGATCGTCGTTGGCTAATTTTCAACCACCACTCTCAGTGACTCTACCAGGAAACTTTCGAAAACCAACTCCAGCAACTGTTGCCACCAATCAATCTTGAAAAATTTTAATAAAAACATTTTTAGTGTATCTAACAAACAAATAAAAACTTGTATATACAAGTACTTCTAAAAAATGTTTTAAAACACATTGTGTTTTTATTTTAAGAAGTTTTCATCAAAAGTGTTTAAATAAAAACGAATTTTTGAAAAACCTTTTTCTAAGTCATTCCAAATACATTTTTAGTTTAATTATAATAATATTTTTAAAAATACACTTATGCTATTTTACATGCAAAATTATTTTATCTACTTGTTGAACTTGTTAATAGTCGTATATGAAGATTGTAACTAAATTTATTAAATGAACAACCTAATTAACATAATTTAATTTAATCACATATCAATTTCTATAAAATATGTTATAATATAAAATTGTAGAAGACATGTATCCCAACTAGTAATAAACTAGTTTGTATAAATTAGTGGAAGGTACAATTCGAGCTATGTTTTCAAAAAATGGTATTTCATGTACCTAATATATATATGCCAAAAAATAAACTATAATACTTTGCACCCCAAACATGGAATATAATAACCCACAGATTATAATAACCCACTCTAAATCCCAAACGCCCCCTTAGAGTCCAAATAGGCATGATATTAAATTTTACTAGCAGGAAAAGACAGATTGTTGGATAAAAACCCTTCAATTTTATAAAAAATCTCTTCACGGAAGCCATATGACTACAAGTAGGAATCTGATAGGGCATGTGTTGGCGATTTGCAAAAACTGTGGCAATAATATCGAGACATGAGTCCATGGCGAGAGTAGAGTATTGAGATGGGCCACAGATACTTTCATTCTATGCATTTTAGCATCCTTTTAACCAAATGACTTGGGAGAATTAGTTGTAGAACTTTCAATATGAAAAGGGGTTTGACATGATTTTTCTTAGATATAACAAAACAATGCAAGACGGTTGAGAGGAGGTATGCAGTGTGTGAGGAAAAGATTGTGAACCCTGATAATGAAATGAGTGTATACACTGTCTGGTATAGCATTTCTAACGTTTTTCCACAAACATATATAAACTCAACACAATCATACTTCGAGTTTTCTCCGCATGGCTACATTTAGAATATAACATTTTGTATTGGTTCAAATAAATCATATCTTAAAATATCTGATCTAGTGAACATTAGTGAGTGGTTTTTTTTATATGTTAATGTGAGTTTCTTCTACATTCATAGTGTGGGTTGGTGAATTGATATGGTCTGATCTGATTAATCAATAATCACCCAAGAACTTGTCAATTCCTTTAACTTGTTGCTAGGCTTTGACTTAGGAATACTTTGCCTCAGCTAGGCAAAATTGGAAGCTCACTATTACTGTTTTATGAAATTTTGAGCTGCTGCTTGGTTTGCTTCTTTGCAATTTTTAATTGAACCCTGAGATAATTTCAGATTCTGTTCAAAGGTGTAATTTTTACGTTCTTTTGAGCTTTATTTTTTCATCTATTAGAATGTCATATTCTTTTACATGATGTCTCTTTTCTTGGGCAATTGATTTCCTTCACCATTCTGATGAAATACTATTTCTCTGTCTTTTTTGGCATAATGCCACTTGAAAGAAAGAAGCATTTTACCCTAAACAAAAATTCTTATGCACTTTTGAACGTTTTTCCCTTCTTCATTAACATTTGCTCTTATTTTGTTTCGATAGTGTGGTAGCCCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAAGACTCTACTGTTAAATCTTCAAGGAGACGACGCCTGCTTGTAAGTAATAACTCTAGGGAAGATCATAACAAGCCTGACATTTCGAATTTTGACCCAGAGCTGTATCGTTTGGGAACTCGTAATAGTCTTACAGTTCCATCAGTCCTTTGGGATGCTGAAACAGATATTGAAGTGGTAAACATTGGAGGAACATCTGATCGTGAACAGTTGTGTGATGAAAGGGGACTAGCAAGTGTCAGATTTGAAGGTGTTGAAGCTTGTGAGAACCAATCTACTTCCAAAGATACAAACTTACTAGTTGACAATGCACCAAGAGTGCTATCAATAACTTCAGAAGATGAACTGCACAATATGAATGATTTGCAAAAGAACATTGAGGATCCAGTTATAGAACTCGATGCAAGCTTACCCTCCACTTCAACAGAGTTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTACCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGTAAAAGTTCTATTCAATTTCTATTCATAGAGATTCAAGGATACGACTAAACCTTGTGATATTGTTTATGCTTTTTGAGCTAAAACTGCTATAAAAGATAGGACCCTGGGCAGTGAACTGTTCAATTTATTCAGCATATGAGAGTTAGCTTTTCTTACTTCATTAACTAGGTTGCATTTTTGCCTTGATAATTGGGACTAGAGAACTACTTATTTGAATTTTCCATCGTATTCATAATCTTCTTAATGACAATTCCTTATATTTTGTAGTAATTGGATTATGTTTTGAACATGCTAGTTATGATTGTGTACTAGTTCTTTATTTGATACATCCGAAGTAAGAACTTCCAGACAAATAACATTGAGAAACAATATGTTGCCTCCATAAATTATTCGTATCTTTTCCAATTTCTCTCTGTACTGCTTATCCATTTTTGTTTTCTAATTCAAAGGTAAAATTCACTATCTAATTCAGCATGGCATGAAATGTGTTTTAGGGATGATAATATATTGCAGAAGTTCAGGATGATGATTGCTCGAGCAGCCATGGGATTTGCATGAATGTTCAACACTGGATATTTTAACTGCTTGTCATATATGGTTGTATTGGGATTCTTGAACTATTAGGCAACGTTGCAGATCTGATTAAGAAAAATTAACCTGAAAATTGTCTCTATAATTGTCCATACATTTTGCTCTTTAGGCAAATTATGTGACCTCCAAATTTATTTATTTTTCCTCTAATCATTACTTGATGGAAAATCTAACATCACTTTCAATAATTCATTTCATCTCAACTTGATTAAAATCCTCAAATCACAAGATTATATATAACTAAACCAAATTATGCGGGCTCCAAATTTACTTATTTTCCTCTAGTGCCAACTTCTGCTTTGAAACTCTGAGACTACTAATGATTTTTGCTCTTTGAACTTGTTGAGTAAGTTCTGTCATTCTGAATTGATTGATTTACTCAGTCATTCAAACGCTGTCAACGTTCTAATATGTACTCTGAAGTTCAGAATCTGTTTCAAGGTCCTAATCTATTGGTCTCGTATCTTGTAGGCTTTGAGCAGAAAAATCTCAACGTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCGGCCACCTCGGATCAGAAGATATACTCCCAAACCATTCCATGTGGATCATCATTATTGGATATTTACCTTCTATCTGATGAAAGAACTCTTAACAACGTTGTTCAGGTCATATTATAATGCTCAATGTCGTTGTTCGTGTGTGTGTGTGTGTGTGTGTTGGGGGGGGGGGGGGGGGGTGTTGATGCAAAGCTAGTACTCATTTTCAAGAATTCCATCTGTAGCTCTTCTCTTCTAATACTCAATGATTTTTCTGGTGACATTCTTATTTACTATGGTTAAAATGGTCCATCTGAACAGACAACTAATTCTCGATAGTTATAATTAACAGCCCTCAGTAGCAGCTGTTTGTAGTGCATGCCGTTGTCGGGAACCAGAGGACCTCCTCATGAGCTGCCATCTTTGTCAAATTCGACAAATTCATTCATATTGTCTGGACCCACCGTTGTTACCATGGACTTGTATTCACTGCAAGGATCTGCAGACACTCTACCATCGAAGCCATTAATTTGTCATCTTGTTAGATCAGGTAACTTGCCCCCACTTTTGATTGTCATATTGTTCCGTATACTTTTCGAAATTCATCTGAGTTGGGTATTGGTGGATTTTGCTTTTGAGAAATTGGATTAAAGACTAGCATTGTGATAGACCCTCGATCCTTAGGAGGTGTATGAGAAAAAAGAGAGGAAGGGAGATAACTGTAAATAATTGTTAAAGGGAAAACGGTTAGTTATGGAGTAAAAGAAGTTACAGTGGGCTCTACAGGGATATAGGGTTAGGTTAGGATTGGGCTATTTAGATTGCCTCTGGGTAAGTCTTTTAATTATCTTTTTGCATTCTGTGAAGTGTAGCCCTGTGAGCATGTTGAAAGGAGGGAGCCTCGACTTCCTTGGCATTTTGGCTTAAATAGTGAATAGATAATCCGAGTTCTATCACGCTGTTATGAGCACAAACAAATAGCGAGCAACTTATCAAGATCCAATTTGCACCTTGTTAACTTTTTTTTTTTAAGAAAAAACCTTTAGACGTTTTTTGATTTCTTAACCCTTTTATTTTGGTCCTTTGACATTTTGCTTTCTTACTTCCATTAATTTCATACTTGGTTGCATTTATTTTTCTAAAAGTAAATGAAAAATTGTGCCCACCCTAATAAATATATCCTACCTTTTCTATGATGTGATTCATTTATATATTTTTCTATTTTCATTGGATTTTTGGTCCCAACGGGGTGACCCCGTCGGCAAAGACACACTGTTTCTTGGTAATATCTTGTCAAAAGCCACATGTTTAAACCTTTGAGTGAGCTTAATGAGAAAAAACCTCTTAATGCTCTCATTTGGACCTTGGGACCGCCGAAAGGTTCTCTAGGATTAGTGATGATGGGTCCCAATACCAATACTTAGGGTATAAGAAAACATTTTTCTTTTATGAACGAATATGGCATACTAATACTCTGACAAACTTTACCATTATTTAAGTCATTTTTATCTTATTTTTTAATTGTTTTAAAATAAATAATTATCTACTTCAGTACTTTTGTGTTTGGATCACATGTGTAACGAAAAGAAAGTTTCAACTAAAATTGAGGTGTTTTAAAAGTCTAAAATAGAAAGTAGATGAATAGAGTTTTTAAAAGAATTAATTAAAATAAGAAACACATAAAGTTATAAACACAAAATGTTGTGCAAACCTAATAATGTAATCAGGACATTATTCTGAGAAGCATTGACTTAAAATTCATGTGCTGTGCAAAAACGTACTGCTACCATTCTCCTTGTATTAGAAGCCAAACACATAGGCTGGGACTTGTCCAAGAGTCTACTTAACTGCAGAATACCCCATTAGAAAGATAGTTTATAAAATCCTATGTAGCTTTACAATGATTGATAGTGATTTTGTTTTAGGTGATTTCATAGAGAAATTGAAGTTGGGTGGCCAACATGAGTTTAGCTCAACTGGCACCTGTATGTTCCTGTGGACAAGAGGTTTCGGATTCAAATCTCCACCCCAGCATTT

mRNA sequence

TTTTCAAAAGTATTGTTTCTATAATTATTTTCAAAATCCACGATATTAATCCAAAATTTCCTTCCCAATTCCTCTATGTTTTAAAATCCCACAAATTCAAATTTATTTCTAATTTTTCGCGGCAATTTCTTGAGGGTTCGATGGAGGAAGAAGAGCACGAGGAAGACCATGGTCTCGCTAATACAATTCTTTCCTGCCCTAATCGAATTCCCGGCTGTCCAATTGAAGGCATGGAATCTGTGGTTGTGACTGTTAGTGGCTACCATGGCACAGAAAGATTTAACCTTATCAAGATGATATCTTATACTGGTGCTAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGATTTGTTGGGAATTACAAGGGAGGAAATTTGATCTTGCTGAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGGTCCTTACATTCTCCAAAGTGGGCAATCTATAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGGGCTATGTCTCAGCCAAAAAGTATAACCTGCTTTCTGAAAAGTTACACAATTACGGAAATGTTGAAGATCAAAGTATTAAAGACATATGCTCTTTTGGTGATTCAATCTTGCCCCGCTCTTCTTTGCTGGATAAGGATCTGTCCTCTGATTTTAGAAAAAGTGATGACACTGCTCATAAGCGAAAGCACAAAGTGCGGAAGAGGATTTCTAAGCTAGAAGACCCATCAAGCTCAAGTAGCAGAAACCGTTTTGAGGAACCAACTTCTGCTGGTCTTTTTGCGATTGAGTGTGGTAGCCCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAAGACTCTACTGTTAAATCTTCAAGGAGACGACGCCTGCTTGTAAGTAATAACTCTAGGGAAGATCATAACAAGCCTGACATTTCGAATTTTGACCCAGAGCTGTATCGTTTGGGAACTCGTAATAGTCTTACAGTTCCATCAGTCCTTTGGGATGCTGAAACAGATATTGAAGTGGTAAACATTGGAGGAACATCTGATCGTGAACAGTTGTGTGATGAAAGGGGACTAGCAAGTGTCAGATTTGAAGGTGTTGAAGCTTGTGAGAACCAATCTACTTCCAAAGATACAAACTTACTAGTTGACAATGCACCAAGAGTGCTATCAATAACTTCAGAAGATGAACTGCACAATATGAATGATTTGCAAAAGAACATTGAGGATCCAGTTATAGAACTCGATGCAAGCTTACCCTCCACTTCAACAGAGTTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTACCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGCTTTGAGCAGAAAAATCTCAACGTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCGGCCACCTCGGATCAGAAGATATACTCCCAAACCATTCCATGTGGATCATCATTATTGGATATTTACCTTCTATCTGATGAAAGAACTCTTAACAACGTTGTTCAGCCCTCAGTAGCAGCTGTTTGTAGTGCATGCCGTTGTCGGGAACCAGAGGACCTCCTCATGAGCTGCCATCTTTGTCAAATTCGACAAATTCATTCATATTGTCTGGACCCACCGTTGTTACCATGGACTTGTATTCACTGCAAGGATCTGCAGACACTCTACCATCGAAGCCATTAATTTGTCATCTTGTTAGATCAGGTGATTTCATAGAGAAATTGAAGTTGGGTGGCCAACATGAGTTTAGCTCAACTGGCACCTGTATGTTCCTGTGGACAAGAGGTTTCGGATTCAAATCTCCACCCCAGCATTT

Coding sequence (CDS)

ATGGAGGAAGAAGAGCACGAGGAAGACCATGGTCTCGCTAATACAATTCTTTCCTGCCCTAATCGAATTCCCGGCTGTCCAATTGAAGGCATGGAATCTGTGGTTGTGACTGTTAGTGGCTACCATGGCACAGAAAGATTTAACCTTATCAAGATGATATCTTATACTGGTGCTAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGATTTGTTGGGAATTACAAGGGAGGAAATTTGATCTTGCTGAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGGTCCTTACATTCTCCAAAGTGGGCAATCTATAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGGGCTATGTCTCAGCCAAAAAGTATAACCTGCTTTCTGAAAAGTTACACAATTACGGAAATGTTGAAGATCAAAGTATTAAAGACATATGCTCTTTTGGTGATTCAATCTTGCCCCGCTCTTCTTTGCTGGATAAGGATCTGTCCTCTGATTTTAGAAAAAGTGATGACACTGCTCATAAGCGAAAGCACAAAGTGCGGAAGAGGATTTCTAAGCTAGAAGACCCATCAAGCTCAAGTAGCAGAAACCGTTTTGAGGAACCAACTTCTGCTGGTCTTTTTGCGATTGAGTGTGGTAGCCCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAAGACTCTACTGTTAAATCTTCAAGGAGACGACGCCTGCTTGTAAGTAATAACTCTAGGGAAGATCATAACAAGCCTGACATTTCGAATTTTGACCCAGAGCTGTATCGTTTGGGAACTCGTAATAGTCTTACAGTTCCATCAGTCCTTTGGGATGCTGAAACAGATATTGAAGTGGTAAACATTGGAGGAACATCTGATCGTGAACAGTTGTGTGATGAAAGGGGACTAGCAAGTGTCAGATTTGAAGGTGTTGAAGCTTGTGAGAACCAATCTACTTCCAAAGATACAAACTTACTAGTTGACAATGCACCAAGAGTGCTATCAATAACTTCAGAAGATGAACTGCACAATATGAATGATTTGCAAAAGAACATTGAGGATCCAGTTATAGAACTCGATGCAAGCTTACCCTCCACTTCAACAGAGTTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTACCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGCTTTGAGCAGAAAAATCTCAACGTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCGGCCACCTCGGATCAGAAGATATACTCCCAAACCATTCCATGTGGATCATCATTATTGGATATTTACCTTCTATCTGATGAAAGAACTCTTAACAACGTTGTTCAGCCCTCAGTAGCAGCTGTTTGTAGTGCATGCCGTTGTCGGGAACCAGAGGACCTCCTCATGAGCTGCCATCTTTGTCAAATTCGACAAATTCATTCATATTGTCTGGACCCACCGTTGTTACCATGGACTTGTATTCACTGCAAGGATCTGCAGACACTCTACCATCGAAGCCATTAA

Protein sequence

MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH*

Homology

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BLAST of CsGy3G020240 vs. ExPASy Swiss-Prot
Match: O04251 (BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 2.6e-15
Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 5   EHEEDHGL---ANTILSCPNR-IPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 64
           +H  D G+   AN+IL  P R + G P  G +++VV ++GY G +R ++++M+   G  +
Sbjct: 81  DHSFDIGMLDNANSILYRPLRDLNGIP--GSKALVVCLTGYQGHDREDIMRMVELMGGQF 140

Query: 65  VGAM-SRSITHLICWELQGRKFDLAEKFRTI-IVNHRWLEDCIKHGKRVPEGPY 113
              + +  +THLIC++ +G K++LA++ + I +VNHRWLEDC+K+ K +PE  Y
Sbjct: 141 SKPLVANRVTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of CsGy3G020240 vs. ExPASy Swiss-Prot
Match: Q6ZW49 (PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 4.2e-05
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 35  VVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAEKFRTIIVNH 94
           +++V+G+  ++R +L  M    GA Y G + RS T LIC E  G K++ A+++R   VN 
Sbjct: 710 IISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEWRIPCVNA 769

Query: 95  RWLEDCI 102
           +WL D +
Sbjct: 770 QWLGDIL 776

[Close]

BLAST of CsGy3G020240 vs. ExPASy Swiss-Prot
Match: Q5XIY8 (PAX-interacting protein 1 OS=Danio rerio OX=7955 GN=paxip1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 7.2e-05
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 35  VVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAEKFRTIIVNH 94
           +++V+G+  ++R +L  M    GA Y G + RS T LIC E  G K++ A+++R   VN 
Sbjct: 772 IISVTGFVDSDRDDLKLMAYLAGARYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNA 831

Query: 95  RWLEDCI 102
           +WL D +
Sbjct: 832 QWLCDIL 838

[Close]

BLAST of CsGy3G020240 vs. ExPASy Swiss-Prot
Match: Q90WJ3 (PAX-interacting protein 1 OS=Xenopus laevis OX=8355 GN=paxip1 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.7e-04
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 35  VVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAEKFRTIIVNH 94
           +++V+G+  ++R +L  M    GA Y G + RS T LIC E  G K++ A+++R   VN 
Sbjct: 899 IISVTGFVDSDRDDLKLMGYLAGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNA 958

Query: 95  RWLEDCI 102
            WL D +
Sbjct: 959 LWLCDIL 965

[Close]

BLAST of CsGy3G020240 vs. NCBI nr
Match: XP_011651366.1 (uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharacterized protein LOC101213123 [Cucumis sativus] >XP_031739474.1 uncharacterized protein LOC101213123 [Cucumis sativus] >KGN57738.1 hypothetical protein Csa_011190 [Cucumis sativus])

HSP 1 Score: 1095 bits (2831), Expect = 0.0
Identity = 541/542 (99.82%), Postives = 541/542 (99.82%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120
           VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120

Query: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS
Sbjct: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180

Query: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240
           SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER
Sbjct: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240

Query: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300
           KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE
Sbjct: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360
           TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED
Sbjct: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCGSSLLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480

Query: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540
           NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR
Sbjct: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540

Query: 541 SH 542
           SH
Sbjct: 541 SH 542

[Close]

BLAST of CsGy3G020240 vs. NCBI nr
Match: XP_038887153.1 (uncharacterized protein LOC120077302 [Benincasa hispida])

HSP 1 Score: 932 bits (2408), Expect = 0.0
Identity = 463/538 (86.06%), Postives = 487/538 (90.52%), Query Frame = 0


Query: 5   EHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAM 64
           E E+DHGLAN +LSCPNR+PGCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVGAM
Sbjct: 2   EEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM 61

Query: 65  SRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLS 124
           SRSITHLICWELQGRKF+LA+KFRTIIVNHRWLEDCIKHGKRVPEGPY+LQSGQ  GPLS
Sbjct: 62  SRSITHLICWELQGRKFNLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYVLQSGQLAGPLS 121

Query: 125 MKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFR 184
           MKLPLA+KG VS KK NLL EKLHNYGNV+DQSIKDICSF DSILP SSLLDKDL SDFR
Sbjct: 122 MKLPLAEKGSVSTKKNNLLCEKLHNYGNVDDQSIKDICSFDDSILPHSSLLDKDLYSDFR 181

Query: 185 KSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGES 244
            SD TAHK K  +R+RISK ED SSSSSRN FEEPT +G FAIE GS S LARDERKGES
Sbjct: 182 NSDVTAHKAKDILRRRISKQEDSSSSSSRNHFEEPTPSGFFAIERGSSSRLARDERKGES 241

Query: 245 SNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIE 304
           SNQDSTV SSRR R LV+ NS EDHNK DI NFD     LGTRNSLT PS  WD ET+IE
Sbjct: 242 SNQDSTVNSSRRCRRLVNKNSTEDHNKADIWNFDLRRNHLGTRNSLTGPSSHWDDETNIE 301

Query: 305 VVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHN 364
           VVNIGGTSDR+QL DERGL+S  FEG+EACE+QSTS+DTNL V+NAPR  SITSEDELHN
Sbjct: 302 VVNIGGTSDRDQLWDERGLSSDSFEGIEACEDQSTSRDTNLQVENAPRGSSITSEDELHN 361

Query: 365 MNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM 424
           +N+LQKNIEDPVIEL+ASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 362 INNLQKNIEDPVIELNASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM 421

Query: 425 ALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQ 484
           ALSRKISTCPLCKA+FLSITKVEDAATSDQKIYSQTIPCG SLLDIY+L DERTLNNVVQ
Sbjct: 422 ALSRKISTCPLCKATFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLNNVVQ 481

Query: 485 PSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542
           PSVAAVCSACRCREPEDLLMSCHLCQIR IHSYCLDPPLLPWTCIHCKDLQ LYHRSH
Sbjct: 482 PSVAAVCSACRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQILYHRSH 539

[Close]

BLAST of CsGy3G020240 vs. NCBI nr
Match: XP_022983591.1 (E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1 E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima])

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 435/536 (81.16%), Postives = 474/536 (88.43%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIK G RVPE PYILQSGQS GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +DKG VS KKY + SEKLHN GNVEDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSN 246
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI CGS SSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVV 306
           ++STV+SSRR R LV  NS EDHN PD+ NFDPE Y L TRNSLTV S   D ETD EVV
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDETDTEVV 302

Query: 307 NIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMN 366
           N+GGT+DR+QLCDERGLAS  FEGVEACENQSTS+ TNLLV+NAPR+L++TSEDELH   
Sbjct: 303 NVGGTADRDQLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELHK-- 362

Query: 367 DLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
           DLQK IEDPVIEL+ S+PST+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 DLQKIIEDPVIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPS 486
           SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIY+L DERTL++VVQPS
Sbjct: 423 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542
           VAAVCS CRC+EPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of CsGy3G020240 vs. NCBI nr
Match: XP_022935568.1 (uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 uncharacterized protein LOC111442404 [Cucurbita moschata])

HSP 1 Score: 880 bits (2275), Expect = 0.0
Identity = 433/536 (80.78%), Postives = 472/536 (88.06%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIKHGKRVPE PYILQSGQS GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +D+G VS KKY + SEKLHN GN+EDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDQGSVSTKKYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSN 246
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI CGS SSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVV 306
           ++STV+SSRR R LV  NS EDHN+PD+ NFDPE Y L  RNS TV S   D ETDIE V
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAV 302

Query: 307 NIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMN 366
           NIGGT+D +QLCDERGLAS  FEGVEAC NQSTS+ TNLLV+NAPR+L+ TSEDELHN  
Sbjct: 303 NIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELHN-- 362

Query: 367 DLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
            LQKNIED VIEL+ S+PSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 GLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPS 486
            RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG+SLLDIY+L DERTL++VVQPS
Sbjct: 423 RRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542
           VAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of CsGy3G020240 vs. NCBI nr
Match: KAG7017909.1 (BRCT domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 872 bits (2252), Expect = 1.42e-315
Identity = 432/540 (80.00%), Postives = 471/540 (87.22%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+ LAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIKHGKRVPE PYILQSGQS GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +D+G VS KKY + SEKLHN GN+EDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIE----CGSPSSLARDERKG 246
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI     CGS SSLARDE KG
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKG 242

Query: 247 ESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETD 306
           +  N++STV+SSRR R LV  NS EDHN+PD+ NFDPE Y L  RNS TV S   D ETD
Sbjct: 243 KRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETD 302

Query: 307 IEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDEL 366
           IE VNIGGT+D +QLCDERGLAS  FEGVEAC NQSTS+ TNLLV+NAPR+L+ TSEDEL
Sbjct: 303 IEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDEL 362

Query: 367 HNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 426
           HN   LQKNIED VIEL+ S+PSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
Sbjct: 363 HN--GLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 422

Query: 427 HMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNV 486
           HMA  RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG+SLLDIY+L DERTL++V
Sbjct: 423 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 482

Query: 487 VQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542
           VQPSVAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 540

[Close]

BLAST of CsGy3G020240 vs. ExPASy TrEMBL
Match: A0A0A0L7F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1)

HSP 1 Score: 1095 bits (2831), Expect = 0.0
Identity = 541/542 (99.82%), Postives = 541/542 (99.82%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120
           VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120

Query: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS
Sbjct: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180

Query: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240
           SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER
Sbjct: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240

Query: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300
           KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE
Sbjct: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360
           TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED
Sbjct: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCGSSLLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480

Query: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540
           NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR
Sbjct: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540

Query: 541 SH 542
           SH
Sbjct: 541 SH 542

[Close]

BLAST of CsGy3G020240 vs. ExPASy TrEMBL
Match: A0A6J1J2R6 (E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482151 PE=4 SV=1)

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 435/536 (81.16%), Postives = 474/536 (88.43%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIK G RVPE PYILQSGQS GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +DKG VS KKY + SEKLHN GNVEDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSN 246
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI CGS SSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVV 306
           ++STV+SSRR R LV  NS EDHN PD+ NFDPE Y L TRNSLTV S   D ETD EVV
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDETDTEVV 302

Query: 307 NIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMN 366
           N+GGT+DR+QLCDERGLAS  FEGVEACENQSTS+ TNLLV+NAPR+L++TSEDELH   
Sbjct: 303 NVGGTADRDQLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELHK-- 362

Query: 367 DLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
           DLQK IEDPVIEL+ S+PST+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 DLQKIIEDPVIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPS 486
           SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIY+L DERTL++VVQPS
Sbjct: 423 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542
           VAAVCS CRC+EPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of CsGy3G020240 vs. ExPASy TrEMBL
Match: A0A6J1FAW6 (uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC111442404 PE=4 SV=1)

HSP 1 Score: 880 bits (2275), Expect = 0.0
Identity = 433/536 (80.78%), Postives = 472/536 (88.06%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIKHGKRVPE PYILQSGQS GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +D+G VS KKY + SEKLHN GN+EDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDQGSVSTKKYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSN 246
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI CGS SSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVV 306
           ++STV+SSRR R LV  NS EDHN+PD+ NFDPE Y L  RNS TV S   D ETDIE V
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAV 302

Query: 307 NIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMN 366
           NIGGT+D +QLCDERGLAS  FEGVEAC NQSTS+ TNLLV+NAPR+L+ TSEDELHN  
Sbjct: 303 NIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELHN-- 362

Query: 367 DLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
            LQKNIED VIEL+ S+PSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 GLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPS 486
            RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG+SLLDIY+L DERTL++VVQPS
Sbjct: 423 RRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542
           VAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of CsGy3G020240 vs. ExPASy TrEMBL
Match: A0A5A7SZQ5 (BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold338G00140 PE=4 SV=1)

HSP 1 Score: 866 bits (2237), Expect = 7.39e-313
Identity = 438/484 (90.50%), Postives = 450/484 (92.98%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHG AN ILSCPNRIPGCPIEGMESVVVTVSGY GTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120
           VGAMSRSITHLICWELQGRKFDLA+KFRTIIVNH WLEDCIKHGKRVPEGPYILQSGQS+
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHHWLEDCIKHGKRVPEGPYILQSGQSV 120

Query: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKG VSAKKYNLLSEKLHNYGNVEDQSI DICS  DSILPR SLLDKDLS
Sbjct: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKDLS 180

Query: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240
           SDFRKSDDTA+K K+KVRKRISK EDPS SSSRN FEEPTS+G  AI+ GS SSLARD+R
Sbjct: 181 SDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGFLAIKRGSSSSLARDKR 240

Query: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300
           KGESSNQDSTVKSSRRR LLVSNNS EDHNKPDI NFDPE Y LGT NSL VPS  W AE
Sbjct: 241 KGESSNQDSTVKSSRRRHLLVSNNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360
           TD+EVVNIGGTSD E+LCDERGLAS+RFEG+EA ENQSTS DTNLLVDNAPRVL IT ED
Sbjct: 301 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIEL+ASLP TSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELNASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYLLSDERTLN 480

Query: 481 NVVQ 484
           NVVQ
Sbjct: 481 NVVQ 484

[Close]

BLAST of CsGy3G020240 vs. ExPASy TrEMBL
Match: A0A5D3DV52 (BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold86G00240 PE=4 SV=1)

HSP 1 Score: 866 bits (2237), Expect = 1.61e-312
Identity = 438/484 (90.50%), Postives = 450/484 (92.98%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHG AN ILSCPNRIPGCPIEGMESVVVTVSGY GTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120
           VGAMSRSITHLICWELQGRKFDLA+KFRTIIVNH WLEDCIKHGKRVPEGPYILQSGQS+
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHHWLEDCIKHGKRVPEGPYILQSGQSV 120

Query: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKG VSAKKYNLLSEKLHNYGNVEDQSI DICS  DSILPR SLLDKDLS
Sbjct: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKDLS 180

Query: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240
           SDFRKSDDTA+K K+KVRKRISK EDPS SSSRN FEEPTS+G  AI+ GS SSLARD+R
Sbjct: 181 SDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGFLAIKRGSSSSLARDKR 240

Query: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300
           KGESSNQDSTVKSSRRR LLVSNNS EDHNKPDI NFDPE Y LGT NSL VPS  W AE
Sbjct: 241 KGESSNQDSTVKSSRRRHLLVSNNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360
           TD+EVVNIGGTSD E+LCDERGLAS+RFEG+EA ENQSTS DTNLLVDNAPRVL IT ED
Sbjct: 301 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIEL+ASLP TSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELNASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYLLSDERTLN 480

Query: 481 NVVQ 484
           NVVQ
Sbjct: 481 NVVQ 484

[Close]

BLAST of CsGy3G020240 vs. TAIR 10
Match: AT1G67180.1 (zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein )

HSP 1 Score: 345.9 bits (886), Expect = 5.9e-95
Identity = 201/518 (38.80%), Postives = 292/518 (56.37%), Query Frame = 0


Query: 31  MESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAEKFRTI 90
           ME+VV TVSGYHG++RF LIK+IS++GASYVGAMSRSITHL+CW+ +G+K+DLA+KF T+
Sbjct: 1   MENVVATVSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTV 60

Query: 91  IVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMKLPLADKGYVSAKKYNLLSEKLHNY 150
           +VNHRW+E+C+K G+RV E PY+  SG+ +GPL ++LP   +     KK N  SE    Y
Sbjct: 61  VVNHRWVEECVKEGRRVSETPYMFDSGEEVGPLMIELPAVSEEAKVTKKVNKASETFDKY 120

Query: 151 ----GNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKSDDTAHKRKHKV--RKRISKL 210
               G     S  ++ ++          ++K++ ++ R S     KR   +   K  S +
Sbjct: 121 FSNGGENRSGSTSELATW----------MEKNVEAN-RHSVRLRTKRPSSILENKENSGV 180

Query: 211 EDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSNQDSTVKSSRRRRLLVSNN 270
            + S    +   ++ +   L  +E          + + ++++ D++ +         + N
Sbjct: 181 AESSRKGKKRVVKQRSYRNLIDLE---------SDEESDNNHHDNSDE---------NQN 240

Query: 271 SREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETDIEVVNIGGTSDREQLCDERGLA 330
             +DH +P   N    ++  G  ++L  P  L     D+                     
Sbjct: 241 ETQDHREPADENVRGFVFEQGETSALRHPGDLATPNWDV--------------------- 300

Query: 331 SVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIEDPVIELDASLP 390
               + +E  EN S S      V   PR  S     E+   +D +   E+   E     P
Sbjct: 301 ----DEIEESENWSHS-----AVFKRPRSFS----PEIKPQDDDESTREE--TEATEKAP 360

Query: 391 STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTCPLCKASFLSIT 450
           +   ++SC+ICWT+FSS+RG+LPCGHRFCYSCIQ WAD +   RK +TCPLCK++F++IT
Sbjct: 361 A---QVSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTCPLCKSNFITIT 420

Query: 451 KVEDAATSDQKIYSQTIPCGSSLLDI-YLLSDERTLNNVVQP-SVAAVCSACRCREPEDL 510
           K+EDA +SDQKIYSQT+P  SS  +I  +L +E      + P + A+ CS C   EPE+L
Sbjct: 421 KIEDADSSDQKIYSQTVPDLSSTNNILVVLPEEEEQRQTLNPLTRASGCSRCYLTEPEEL 450

Query: 511 LMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 541
           L+ CHLC  R+IHSYCLDP LLPWTC HC DLQ +YHR
Sbjct: 481 LIRCHLCNFRRIHSYCLDPYLLPWTCNHCNDLQMMYHR 450

[Close]

BLAST of CsGy3G020240 vs. TAIR 10
Match: AT4G02110.1 (transcription coactivators )

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-16
Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 5   EHEEDHGL---ANTILSCPNR-IPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 64
           +H  D G+   AN+IL  P R + G P  G +++VV ++GY G +R ++++M+   G  +
Sbjct: 81  DHSFDIGMLDNANSILYRPLRDLNGIP--GSKALVVCLTGYQGHDREDIMRMVELMGGQF 140

Query: 65  VGAM-SRSITHLICWELQGRKFDLAEKFRTI-IVNHRWLEDCIKHGKRVPEGPY 113
              + +  +THLIC++ +G K++LA++ + I +VNHRWLEDC+K+ K +PE  Y
Sbjct: 141 SKPLVANRVTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of CsGy3G020240 vs. TAIR 10
Match: AT1G77320.1 (transcription coactivators )

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-06
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 27  PIEGMESVVVTVSGYHGTERFNLIKMISYT-GASYVGAMSRSITHLICWELQGRKFDLAE 86
           P+ G ES+ +  S  H  +   L++ +S   GA +V  ++R +THLIC   +G K+  A 
Sbjct: 660 PLPGFESLCI-CSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRAS 719

Query: 87  KFRTIIVNHRWLEDCIKHGKRV 108
           K+  I V   WL +C++  + V
Sbjct: 720 KWGIISVTPDWLYECVRQNQVV 740

[Close]

BLAST of CsGy3G020240 vs. TAIR 10
Match: AT1G77320.2 (transcription coactivators )

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-06
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 27  PIEGMESVVVTVSGYHGTERFNLIKMISYT-GASYVGAMSRSITHLICWELQGRKFDLAE 86
           P+ G ES+ +  S  H  +   L++ +S   GA +V  ++R +THLIC   +G K+  A 
Sbjct: 643 PLPGFESLCI-CSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRAS 702

Query: 87  KFRTIIVNHRWLEDCIKHGKRV 108
           K+  I V   WL +C++  + V
Sbjct: 703 KWGIISVTPDWLYECVRQNQVV 723

The following BLAST results are available for this feature:

BLAST of CsGy3G020240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04251	2.6e-15	38.60	BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
Q6ZW49	4.2e-05	37.31	PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2	[more]
Q5XIY8	7.2e-05	37.31	PAX-interacting protein 1 OS=Danio rerio OX=7955 GN=paxip1 PE=2 SV=1	[more]
Q90WJ3	2.7e-04	37.31	PAX-interacting protein 1 OS=Xenopus laevis OX=8355 GN=paxip1 PE=1 SV=1	[more]

BLAST of CsGy3G020240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651366.1	0.0	99.82	uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharact...	[more]
XP_038887153.1	0.0	86.06	uncharacterized protein LOC120077302 [Benincasa hispida]	[more]
XP_022983591.1	0.0	81.16	E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1...	[more]
XP_022935568.1	0.0	80.78	uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 unchar...	[more]
KAG7017909.1	1.42e-315	80.00	BRCT domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsGy3G020240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7F3	0.0	99.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1	[more]
A0A6J1J2R6	0.0	81.16	E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FAW6	0.0	80.78	uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A5A7SZQ5	7.39e-313	90.50	BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DV52	1.61e-312	90.50	BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CsGy3G020240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67180.1	5.9e-95	38.80	zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing pro...	[more]
AT4G02110.1	1.9e-16	38.60	transcription coactivators	[more]
AT1G77320.1	1.3e-06	32.93	transcription coactivators	[more]
AT1G77320.2	1.3e-06	32.93	transcription coactivators	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 28..104 e-value: 2.1E-12 score: 57.2
IPR001357	BRCT domain	PFAM	PF12738	PTCB-BRCT	coord: 34..96 e-value: 2.0E-17 score: 62.9
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 31..114 score: 16.566721
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 392..436 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 391..437 e-value: 1.3E-9 score: 38.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 392..437 score: 13.344952
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 28..119 e-value: 7.0E-24 score: 86.0
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 28..115
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 352..462 e-value: 9.6E-15 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..276
None	No IPR available	PANTHER	PTHR47776	F5A8.9 PROTEIN	coord: 27..540
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 391..445
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 408..417
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 484..532

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G020240.2	CsGy3G020240.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0046872	metal ion binding