CsGy3G020170 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G020170
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein rough sheath 2 homolog
Location	Gy14Chr3: 16735370 .. 16736872 (+)
RNA-Seq Expression	CsGy3G020170
Synteny	CsGy3G020170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCCCTGCCCTCCATTTCTCCCTCTTCAATTTATCCTCAAAATCCCCACAATACCCTTCACTTCCATCTTCATCTTCATCTCTTTTCACCCTCTTCCCCTCTCTCTCTCTCTCTACACCTCTCTCTCTCTCTCTCTCTGCACCAGCTATGGTGTCTATGAAATGAAGGACCGCCAACGCTGGCAGCCTGAAGAAGACGCCCTTCTCCGAGCTTACGTCAAACAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCAACCCTCTCCATCGCGACCCTAAATCCTGCCTCGAACGCTGGAAAAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCCCTCGTTATCTCTCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATTGCCGCCGAGGTCCCCGGCCGTACCCCCAAACGTCTCGGTAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAACAGTTACACAAGGCCAACAACTTAACACAATCCTCTCTCGACCCCAATCTTCCTATTTCTCTTGCTGTTTCCTCCCCCGAGAAAGCGCTTCAAGGCCCTTACGACCATATTTTGGAGACCTTCGCTGAGAAGTACGTTCAGCCTAAGCTTTATCCTCATCCAAATTCTATCCCTGACGCCGATCCCCTGCTTTCTCTTGGATCGGTTACCTCTACCACCTCCTCTTCCACTCTTCTTCCTCTCTGGATGAATGTTAACTCCACCAGCACTGCTTCTTCTTCCACTTGCTCAACTACGCCGTCTCCCTCCGTCAGTTTAACGCTATCTCCATCTGAACCTGGGTGTTTGGAGTCGGAAGTTAACCGGATCGGAGCCTTAGTTCAGTACTGTAAGGAGGTGGAAGAAGGGCGGCAGAGTTGGGTTCAACACAAGAAGGAAGCTAGCTGGAGATTGAATCGATTAGAGCAACAACTGGAATCGGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCCAAAATACAGAGGTTGAGAGAAGAAGAAAGGGTTTATTTAGGAGGAATCGAGAGGGATTACAGAGAACAGTTGAATGCTTTGCGAAGAGAAGCGGATTGTAAAGAGGCGAAGCTTGTGGAAGATTGGTGTAATAAGCATTCGAAATTGGCGAAGCTAGTGGAGAAATTTGGAGGTCATGGGTTGTTGGGTGTTTCCAAGGACATTGTTCATTGAAGCTCTGCTTCCATGGCGGTGTGAGTTCAAAATGCAGGTTGGTTTTTTCTCTCTGTACCTGTTTCTTTTTACATTACATAGACTCTGTTTTTTTGTTGGGAACAAATTCGATAATCAAAGGGAAGAAGAAGAAGAAGAAGATTAAAAAGTAAGTAATAAAACAAAAGATGGAAAATCTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCATTCCAATGGGATCTTATTATTAATTAAATAATAAAATTTAATTCTACGAGACTTTCA

mRNA sequence

CCCCCCCCTGCCCTCCATTTCTCCCTCTTCAATTTATCCTCAAAATCCCCACAATACCCTTCACTTCCATCTTCATCTTCATCTCTTTTCACCCTCTTCCCCTCTCTCTCTCTCTCTACACCTCTCTCTCTCTCTCTCTCTGCACCAGCTATGGTGTCTATGAAATGAAGGACCGCCAACGCTGGCAGCCTGAAGAAGACGCCCTTCTCCGAGCTTACGTCAAACAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCAACCCTCTCCATCGCGACCCTAAATCCTGCCTCGAACGCTGGAAAAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCCCTCGTTATCTCTCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATTGCCGCCGAGGTCCCCGGCCGTACCCCCAAACGTCTCGGTAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAACAGTTACACAAGGCCAACAACTTAACACAATCCTCTCTCGACCCCAATCTTCCTATTTCTCTTGCTGTTTCCTCCCCCGAGAAAGCGCTTCAAGGCCCTTACGACCATATTTTGGAGACCTTCGCTGAGAAGTACGTTCAGCCTAAGCTTTATCCTCATCCAAATTCTATCCCTGACGCCGATCCCCTGCTTTCTCTTGGATCGGTTACCTCTACCACCTCCTCTTCCACTCTTCTTCCTCTCTGGATGAATGTTAACTCCACCAGCACTGCTTCTTCTTCCACTTGCTCAACTACGCCGTCTCCCTCCGTCAGTTTAACGCTATCTCCATCTGAACCTGGGTGTTTGGAGTCGGAAGTTAACCGGATCGGAGCCTTAGTTCAGTACTGTAAGGAGGTGGAAGAAGGGCGGCAGAGTTGGGTTCAACACAAGAAGGAAGCTAGCTGGAGATTGAATCGATTAGAGCAACAACTGGAATCGGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCCAAAATACAGAGGTTGAGAGAAGAAGAAAGGGTTTATTTAGGAGGAATCGAGAGGGATTACAGAGAACAGTTGAATGCTTTGCGAAGAGAAGCGGATTGTAAAGAGGCGAAGCTTGTGGAAGATTGGTGTAATAAGCATTCGAAATTGGCGAAGCTAGTGGAGAAATTTGGAGGTCATGGGTTGTTGGGTGTTTCCAAGGACATTGTTCATTGAAGCTCTGCTTCCATGGCGGTGTGAGTTCAAAATGCAGGTTGGTTTTTTCTCTCTGTACCTGTTTCTTTTTACATTACATAGACTCTGTTTTTTTGTTGGGAACAAATTCGATAATCAAAGGGAAGAAGAAGAAGAAGAAGATTAAAAAGTAAGTAATAAAACAAAAGATGGAAAATCTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCATTCCAATGGGATCTTATTATTAATTAAATAATAAAATTTAATTCTACGAGACTTTCA

Coding sequence (CDS)

ATGAAGGACCGCCAACGCTGGCAGCCTGAAGAAGACGCCCTTCTCCGAGCTTACGTCAAACAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCAACCCTCTCCATCGCGACCCTAAATCCTGCCTCGAACGCTGGAAAAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCCCTCGTTATCTCTCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATTGCCGCCGAGGTCCCCGGCCGTACCCCCAAACGTCTCGGTAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAACAGTTACACAAGGCCAACAACTTAACACAATCCTCTCTCGACCCCAATCTTCCTATTTCTCTTGCTGTTTCCTCCCCCGAGAAAGCGCTTCAAGGCCCTTACGACCATATTTTGGAGACCTTCGCTGAGAAGTACGTTCAGCCTAAGCTTTATCCTCATCCAAATTCTATCCCTGACGCCGATCCCCTGCTTTCTCTTGGATCGGTTACCTCTACCACCTCCTCTTCCACTCTTCTTCCTCTCTGGATGAATGTTAACTCCACCAGCACTGCTTCTTCTTCCACTTGCTCAACTACGCCGTCTCCCTCCGTCAGTTTAACGCTATCTCCATCTGAACCTGGGTGTTTGGAGTCGGAAGTTAACCGGATCGGAGCCTTAGTTCAGTACTGTAAGGAGGTGGAAGAAGGGCGGCAGAGTTGGGTTCAACACAAGAAGGAAGCTAGCTGGAGATTGAATCGATTAGAGCAACAACTGGAATCGGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCCAAAATACAGAGGTTGAGAGAAGAAGAAAGGGTTTATTTAGGAGGAATCGAGAGGGATTACAGAGAACAGTTGAATGCTTTGCGAAGAGAAGCGGATTGTAAAGAGGCGAAGCTTGTGGAAGATTGGTGTAATAAGCATTCGAAATTGGCGAAGCTAGTGGAGAAATTTGGAGGTCATGGGTTGTTGGGTGTTTCCAAGGACATTGTTCATTGA

Protein sequence

MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQSSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH*

Homology

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BLAST of CsGy3G020170 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 9.3e-78
Identity = 176/380 (46.32%), Postives = 233/380 (61.32%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++  ++N   + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVE- 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLS------ 180
                 PI           +  YD ILE+FAEK V+ +    P +   A  +++      
Sbjct: 121 ------PID----------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMANSNGGF 180

Query: 181 LGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSE------------- 240
           L S       + ++P W+     +T+++        PSV+LTLSPS              
Sbjct: 181 LHSEQQVQPPNPVIPPWL-----ATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWL 240

Query: 241 ---------------------PGCL-ESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWR 300
                                P C   SE   +  LV+ C+E+EEG ++W  HKKEA+WR
Sbjct: 241 QQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEAAWR 300

Query: 301 LNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKE 340
           L RLE QLESEK  ++REKMEE+EAK++ LREE++  +  IE +YREQL  LRR+A+ K+
Sbjct: 301 LRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAEAKD 358

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BLAST of CsGy3G020170 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.9e-75
Identity = 171/383 (44.65%), Postives = 233/383 (60.84%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW+PEEDA+LRAYV+QYGP+EW+L+S RM   L RD KSCLERWKNYL+PG+KKG
Sbjct: 1   MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ EEQ LVI LQAK+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++L        S
Sbjct: 61  SLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELR------DS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
              P  P      SP++  +G Y+ +LE FAEK V  +            P  +  + + 
Sbjct: 121 RRPPPEP------SPDE--RGRYEWLLENFAEKLVGER------------PQQAAAAPSP 180

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTC-----STTPSPSVSLTL------------------ 240
              ++ +LP W++ N+   A+++          PSPSV+L+L                  
Sbjct: 181 LLMAAPVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWMPD 240

Query: 241 ------------SPSE------PGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWR 300
                       SPS+      PG    +   +  L + C+E+EEGR++W  H++EA+WR
Sbjct: 241 RAAADAAPYGFPSPSQHGGAAPPGMAVVDGQALAELAECCRELEEGRRAWAAHRREAAWR 300

Query: 301 LNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKE 343
           L R+EQQLE E+  ++RE  EE EAK++ +R E+      +ERD+RE++  LRR+A  KE
Sbjct: 301 LKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKE 357

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BLAST of CsGy3G020170 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-75
Identity = 163/344 (47.38%), Postives = 226/344 (65.70%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           M++RQRW+PEEDA+L AYV+QYGP+EW+L+S RM  PLHRD KSCLERWKNYL+PG+KKG
Sbjct: 6   MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKG 65

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ +EQ LVI LQAK+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++L   +   + 
Sbjct: 66  SLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRD---RR 125

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
            L P L              G YD +LE FA+K V      H   +              
Sbjct: 126 RLPPPLD-----GDERGCAGGRYDWLLEDFADKLVN----DHHRRM-------------- 185

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEP-----GCLESEVNRIGAL 240
              ++ +LP WM  +S+ ++SSS   T    S ++  +P+ P     G    EV  +  L
Sbjct: 186 --MAAPILPPWM--SSSPSSSSSPSVTLSLASAAVAPAPAAPPPTWGGGGGGEV-VVAEL 245

Query: 241 VQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERV 300
           ++ C+E+EEG+++W  H+KEA+WR+ R+E QLE+E+A ++RE  EE EAK++ LREE+  
Sbjct: 246 MECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREATEEFEAKMRALREEQAA 305

Query: 301 YLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEK 340
            +  +E +YRE++  LRR+A+ KE K+ E W  KH++LAK +++
Sbjct: 306 AVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQ 318

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BLAST of CsGy3G020170 vs. ExPASy Swiss-Prot
Match: Q24JK1 (Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.7e-19
Identity = 72/242 (29.75%), Postives = 119/242 (49.17%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  +       L R  KSC  RW NYL+PG+K+G+ +  E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRSVPTH--TGLRRCSKSCRLRWTNYLRPGIKRGNFTEHE 76

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQSSLDPNL 126
           +  ++ LQA  GN+W  IA+ +P RT   +  +W    +K+LK+++++            
Sbjct: 77  EKTIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKINESGEEDND------ 136

Query: 127 PISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTSTTSSST 186
                VSS   + Q  +    +   E+ +Q  +     ++ +A   LSL   +ST SSS+
Sbjct: 137 ----GVSSSNTSSQKNHQSTNKGQWERRLQTDINMAKQALCEA---LSLDKPSSTLSSSS 196

Query: 187 LLP----LWMNVNSTSTA-------SSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGAL 238
            LP       N+ + S+A        SS+ S+T + + S T +P   G   S    I  L
Sbjct: 197 SLPTPVITQQNIRNFSSALLDRCYDPSSSSSSTTTTTTSNTTNPYPSGVYASSAENIARL 243

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BLAST of CsGy3G020170 vs. ExPASy Swiss-Prot
Match: P81392 (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 9.8e-19
Identity = 79/235 (33.62%), Postives = 115/235 (48.94%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  I       L R  KSC  RW NYL+PG+K+G  +  E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRAIPSN--TGLLRCSKSCRLRWTNYLRPGIKRGDFTEHE 76

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQSSLDPNL 126
           + ++I LQA  GN+W  IA+ +P RT   +  +W    +K+L++L    N      D N 
Sbjct: 77  EKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPEN--GKCQDGN- 136

Query: 127 PISLAVSSPEKALQGPYDHILET---FAEKYVQPKLYPHPNSIPDADPLLSLGSVT---- 186
               +V S +   +G ++  L+T    A++ +   L     S    DP LS    T    
Sbjct: 137 ---SSVDSDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLSTVQTTQPRP 196

Query: 187 ---STTSS----STLLPLW-----MNVNSTSTASSSTCSTTPSPSVSLTLSPSEP 223
              ST SS    + LL  W     +N +STS A SS  +TT     S+ LS S P
Sbjct: 197 FQASTYSSAENIARLLENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLSTSSP 243

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BLAST of CsGy3G020170 vs. NCBI nr
Match: XP_011651362.1 (transcription factor AS1 [Cucumis sativus] >KGN57728.1 hypothetical protein Csa_010301 [Cucumis sativus])

HSP 1 Score: 696 bits (1797), Expect = 1.17e-252
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240
           TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK
Sbjct: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354
           ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354

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BLAST of CsGy3G020170 vs. NCBI nr
Match: XP_008461573.1 (PREDICTED: LOW QUALITY PROTEIN: transcription factor AS1-like [Cucumis melo] >KAA0036142.1 transcription factor AS1-like [Cucumis melo var. makuwa] >TYK13501.1 transcription factor AS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 687 bits (1772), Expect = 7.58e-249
Identity = 349/354 (98.59%), Postives = 351/354 (99.15%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHP  IPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPIPIPDADPLLSLGSVTS 180

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240
           TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK
Sbjct: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354
           ERDY+EQLNAL+READCKEAKLVEDWCNKHSKL KLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsGy3G020170 vs. NCBI nr
Match: XP_038907190.1 (protein rough sheath 2 homolog [Benincasa hispida])

HSP 1 Score: 584 bits (1505), Expect = 1.31e-207
Identity = 317/389 (81.49%), Postives = 334/389 (85.86%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQL KA NLTQ 
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLQKAQNLTQR 120

Query: 121 -----SSLDPNL-PISLAVSSPEKALQGPYDHILETFAEKYVQPKLY----------PHP 180
                S++D N+ PI+  VSSPEKALQGPYDHILETFAEKYVQPKLY          PHP
Sbjct: 121 RDYQTSAVDGNIIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAATAAAFQSPHP 180

Query: 181 NS-------------IPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPS 240
                          IPDADP+LSLGSV+STTS+ST+LPLWMNVNSTSTASSST STTPS
Sbjct: 181 PPPPSPLANVMPRLPIPDADPVLSLGSVSSTTSTSTVLPLWMNVNSTSTASSSTSSTTPS 240

Query: 241 PSVSLTLSPSEPGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESE 300
           PSVSLTLSPSEP  L+ EVNRIGALVQYCKE+EEGRQSWVQHKKEA+WRLNRLEQQLESE
Sbjct: 241 PSVSLTLSPSEPASLDLEVNRIGALVQYCKEMEEGRQSWVQHKKEATWRLNRLEQQLESE 300

Query: 301 KARKKREKMEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKH 354
           KARKKREKMEEMEAKIQRLREEER YLG IE DYREQLNAL+R+ADCKEAKL+E WC+KH
Sbjct: 301 KARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKH 360

[Close]

BLAST of CsGy3G020170 vs. NCBI nr
Match: KAG6581166.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 559 bits (1441), Expect = 5.23e-198
Identity = 303/381 (79.53%), Postives = 328/381 (86.09%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLR YVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRDYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVF+EKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY-----------PHPN- 180
               + D N+P+ + VSSPEKA+QGPYDHILETFAEKYVQPK+Y           P P  
Sbjct: 121 RDYQNSDGNIPV-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPPPPRL 180

Query: 181 SIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGC 240
           S+P+ADP+LSLGSV+STTSS T+LPLWMNVNSTSTASSST STTPSPSVSLTLSPSEP  
Sbjct: 181 SVPEADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTLSPSEPAI 240

Query: 241 LESEVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREK 300
           LESEVNRI      GALVQYCK++EEGRQ+WVQHKKEA+WRLNRLEQQLESEKARKKREK
Sbjct: 241 LESEVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEKARKKREK 300

Query: 301 MEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVE 354
           MEEMEAKIQRLREEE  YLG IE DYREQL+AL+R+AD KEAKLVE WC+KH+KLAKLVE
Sbjct: 301 MEEMEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAKLVE 360

[Close]

BLAST of CsGy3G020170 vs. NCBI nr
Match: XP_022935393.1 (protein rough sheath 2 homolog [Cucurbita moschata])

HSP 1 Score: 558 bits (1438), Expect = 1.34e-197
Identity = 302/378 (79.89%), Postives = 327/378 (86.51%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVF+EKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY--------PHPN-SIP 180
               + D N+P+ + VSSPEKA+QGPYDHILETFAEKYVQPK+Y        P P  S+P
Sbjct: 121 RDYQNSDGNIPV-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPRLSVP 180

Query: 181 DADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLES 240
           +ADP+LSLGSV+STTSS T+LPLWMNVNSTSTASSST STTPSPSVSLTLSPSEP  LES
Sbjct: 181 EADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTLSPSEPAILES 240

Query: 241 EVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEE 300
           EVNRI      GALVQYCK++EEGRQ+WVQHKKEA+WRLNRLEQQLESEKARKKREKMEE
Sbjct: 241 EVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEKARKKREKMEE 300

Query: 301 MEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFG 354
           MEAKIQRLREEE  YLG IE DYREQL+AL+R+AD KEAKLVE WC+KH+KLAKLVEK+G
Sbjct: 301 MEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAKLVEKYG 360

[Close]

BLAST of CsGy3G020170 vs. ExPASy TrEMBL
Match: A0A0A0L7E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G264750 PE=4 SV=1)

HSP 1 Score: 696 bits (1797), Expect = 5.68e-253
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240
           TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK
Sbjct: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354
           ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsGy3G020170 vs. ExPASy TrEMBL
Match: A0A5D3CNU9 (Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00170 PE=4 SV=1)

HSP 1 Score: 687 bits (1772), Expect = 3.67e-249
Identity = 349/354 (98.59%), Postives = 351/354 (99.15%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHP  IPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPIPIPDADPLLSLGSVTS 180

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240
           TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK
Sbjct: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354
           ERDY+EQLNAL+READCKEAKLVEDWCNKHSKL KLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsGy3G020170 vs. ExPASy TrEMBL
Match: A0A1S3CEX4 (LOW QUALITY PROTEIN: transcription factor AS1-like OS=Cucumis melo OX=3656 GN=LOC103500142 PE=4 SV=1)

HSP 1 Score: 687 bits (1772), Expect = 3.67e-249
Identity = 349/354 (98.59%), Postives = 351/354 (99.15%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHP  IPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPIPIPDADPLLSLGSVTS 180

Query: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240
           TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK
Sbjct: 181 TTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354
           ERDY+EQLNAL+READCKEAKLVEDWCNKHSKL KLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsGy3G020170 vs. ExPASy TrEMBL
Match: A0A6J1FAF4 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=4 SV=1)

HSP 1 Score: 558 bits (1438), Expect = 6.50e-198
Identity = 302/378 (79.89%), Postives = 327/378 (86.51%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVF+EKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY--------PHPN-SIP 180
               + D N+P+ + VSSPEKA+QGPYDHILETFAEKYVQPK+Y        P P  S+P
Sbjct: 121 RDYQNSDGNIPV-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPRLSVP 180

Query: 181 DADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLES 240
           +ADP+LSLGSV+STTSS T+LPLWMNVNSTSTASSST STTPSPSVSLTLSPSEP  LES
Sbjct: 181 EADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTLSPSEPAILES 240

Query: 241 EVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEE 300
           EVNRI      GALVQYCK++EEGRQ+WVQHKKEA+WRLNRLEQQLESEKARKKREKMEE
Sbjct: 241 EVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEKARKKREKMEE 300

Query: 301 MEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFG 354
           MEAKIQRLREEE  YLG IE DYREQL+AL+R+AD KEAKLVE WC+KH+KLAKLVEK+G
Sbjct: 301 MEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAKLVEKYG 360

[Close]

BLAST of CsGy3G020170 vs. ExPASy TrEMBL
Match: A0A6J1IZB3 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 SV=1)

HSP 1 Score: 557 bits (1435), Expect = 2.07e-197
Identity = 303/381 (79.53%), Postives = 327/381 (85.83%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY-----------PHPN- 180
               + D N+PI + VSSPEKA+QGPYDHILETFAEKYVQPK+Y           P P  
Sbjct: 121 HDYQNSDGNIPI-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPPPPRL 180

Query: 181 SIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGC 240
           S+P+ADP+LSLGSV+STTSS T+LPLWMN NSTSTASSST STTPSPSVSLTLSPSEP  
Sbjct: 181 SVPEADPVLSLGSVSSTTSSPTVLPLWMNANSTSTASSSTVSTTPSPSVSLTLSPSEPAI 240

Query: 241 LESEVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREK 300
            E+EVNRI      GALVQYCK++EEGRQSWVQHKKEA+WRLNRLE+QLESEKARKKREK
Sbjct: 241 NETEVNRILPVQQMGALVQYCKDLEEGRQSWVQHKKEATWRLNRLEKQLESEKARKKREK 300

Query: 301 MEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVE 354
           MEEMEAKIQRLREEE  YLG IE DYREQL+AL+R+AD KEAKLVE WC+KH+KLAKLVE
Sbjct: 301 MEEMEAKIQRLREEESAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAKLVE 360

[Close]

BLAST of CsGy3G020170 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 292.0 bits (746), Expect = 6.6e-79
Identity = 176/380 (46.32%), Postives = 233/380 (61.32%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++  ++N   + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVE- 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLS------ 180
                 PI           +  YD ILE+FAEK V+ +    P +   A  +++      
Sbjct: 121 ------PID----------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMANSNGGF 180

Query: 181 LGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSE------------- 240
           L S       + ++P W+     +T+++        PSV+LTLSPS              
Sbjct: 181 LHSEQQVQPPNPVIPPWL-----ATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWL 240

Query: 241 ---------------------PGCL-ESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWR 300
                                P C   SE   +  LV+ C+E+EEG ++W  HKKEA+WR
Sbjct: 241 QQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEAAWR 300

Query: 301 LNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKE 340
           L RLE QLESEK  ++REKMEE+EAK++ LREE++  +  IE +YREQL  LRR+A+ K+
Sbjct: 301 LRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAEAKD 358

[Close]

BLAST of CsGy3G020170 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-21
Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  Y+   G   WNL++    + L R  KSC  RW NYLKP +K+G+L+P+E
Sbjct: 23  WTLEEDTLLTNYISHNGEGRWNLLA--KSSGLKRAGKSCRLRWLNYLKPDIKRGNLTPQE 82

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANN 117
           Q L++ L +K+GN+W KI+  +PGRT   +  +W    +KQ +QL+  +N
Sbjct: 83  QLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSN 130

[Close]

BLAST of CsGy3G020170 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 99.4 bits (246), Expect = 6.3e-21
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of CsGy3G020170 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 99.0 bits (245), Expect = 8.2e-21
Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  +ED LL  +V  +G + W+ ++    + L+R  KSC  RW NYL PGLK+G ++P+E
Sbjct: 13  WTEQEDILLVNFVHLFGDRRWDFVA--KVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQE 72

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQSS 122
           + LV+ L AK+GN+W KIA ++PGRT   +  +W     K+ ++  +  + T SS
Sbjct: 73  ERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSS 125

[Close]

BLAST of CsGy3G020170 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-20
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  +ED LL  +V  +G + W+ I+    + L+R  KSC  RW NYL PGLK+G ++P+E
Sbjct: 12  WTEQEDILLVNFVHLFGDRRWDFIA--KVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQE 71

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 121
           + LV+ L AK+GN+W KIA ++PGRT   +  +W     K+ ++  +  + T S
Sbjct: 72  ERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSS 123

The following BLAST results are available for this feature:

BLAST of CsGy3G020170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	9.3e-78	46.32	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q9S7B2	1.9e-75	44.65	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]
Q94IB1	2.5e-75	47.38	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q24JK1	5.7e-19	29.75	Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1	[more]
P81392	9.8e-19	33.62	Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1	[more]

BLAST of CsGy3G020170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651362.1	1.17e-252	100.00	transcription factor AS1 [Cucumis sativus] >KGN57728.1 hypothetical protein Csa_...	[more]
XP_008461573.1	7.58e-249	98.59	PREDICTED: LOW QUALITY PROTEIN: transcription factor AS1-like [Cucumis melo] >KA...	[more]
XP_038907190.1	1.31e-207	81.49	protein rough sheath 2 homolog [Benincasa hispida]	[more]
KAG6581166.1	5.23e-198	79.53	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935393.1	1.34e-197	79.89	protein rough sheath 2 homolog [Cucurbita moschata]	[more]

BLAST of CsGy3G020170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7E6	5.68e-253	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G264750 PE=4 SV=1	[more]
A0A5D3CNU9	3.67e-249	98.59	Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CEX4	3.67e-249	98.59	LOW QUALITY PROTEIN: transcription factor AS1-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1FAF4	6.50e-198	79.89	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=...	[more]
A0A6J1IZB3	2.07e-197	79.53	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 ...	[more]

BLAST of CsGy3G020170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	6.6e-79	46.32	myb-like HTH transcriptional regulator family protein	[more]
AT1G25340.1	2.8e-21	42.73	myb domain protein 116	[more]
AT5G52600.1	6.3e-21	44.23	myb domain protein 82	[more]
AT5G59780.3	8.2e-21	39.13	myb domain protein 59	[more]
AT3G46130.1	2.4e-20	39.47	myb domain protein 48	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..295
None	No IPR available	COILS	Coil	Coil	coord: 301..321
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..69 e-value: 3.9E-15 score: 55.8
None	No IPR available	GENE3D	1.10.10.60		coord: 4..58 e-value: 1.8E-18 score: 68.2
None	No IPR available	GENE3D	1.10.10.60		coord: 62..121 e-value: 3.8E-11 score: 44.7
None	No IPR available	PANTHER	PTHR47214:SF1	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..345
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..345
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..55 e-value: 4.6E-15 score: 66.0 coord: 58..106 e-value: 8.5E-10 score: 48.6
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 7.735266
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..53 score: 10.162258
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 63..104 e-value: 2.18423E-6 score: 42.1774
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..53 e-value: 5.36881E-10 score: 52.1926
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..108 score: 19.425716
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..57 score: 24.502167
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G020170.1	CsGy3G020170.1	mRNA