CsGy3G020160 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G020160
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 16677326 .. 16681131 (+)
RNA-Seq ExpressionCsGy3G020160
SyntenyCsGy3G020160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACGAAGTCCTTTGCCTTTCTCCAGAATCCAAACTTCTAACCCCACTCCAATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAGGTGAGATGAGCTCAGCAAGAACAACTTAACTTGAAGTCAGAGACCAAGAAAAAAATGATGAAAGACTTTTCGATATATTAACTAATGTCATCATAAAGCCCATACAAGCGGCCTTTGACAATGTGTTGGAAGAGAATCTGGCATTGAAACAAACATATCGATTATCATACCCCACCCCAAGCATTTGCTTGCTTGACTCGAGATGCGGCGTGATGTCAGCTGAAGCTATTCACCTCTAAAACAACCTCAACTGACCCTTGACATAAAATCATGAAACATTCAACAGTGGAAGTCTTTAAACTTTGAAATACTTTAAAATCATAGTGTAACCTGTTTGAAATGCCTTTTATAAATGTCTAAAACATGAAGATATAAACTTTTAATAAATGCAGTAATACTTTTAACAAATCTATTCTTCCCATGATTGAAAATTTGATTGGCCTTGCAACAATAAGTTCATTACGCGGAGAGTTAGTATCTGTACCCAGAAAGAGGGAAAACATTTTGAAAGGGTAAGTCGAAAGACTTAGTGAGCAACAGTTTTAAAAAACAAGTTTTCATAAACAATTTAATATAAAACTAAAGCTTCAAATACATTTGTCAATAAACAATCATTTCAAAACATGTTACTTGAAACATTTGCATAGCTTTTCAAAGACAATGTTTCATAGCCACATGCAAAATTAAACCTCTTCATTCGAAGACGGAACAATCGAGTGGAAATAATTTTCACTGTAATCCTTCTCCTTTAAGGCATAAATACATACCTTTCCTGATGGCCCATAAACTATAGGCTTGTCAACCTTACTATTAGTTTGAAGTTAACCACATGTATACAATATGTCTCACGGAATATTCGAGCTAGGAGAAAACATTTGAAAACTTTGAAATATTTTCCAAGCCTTGATAATGAAATCATTCAAACACGGTATAACTTAAACATCAATTCATAAACATTTATCATGAATCATAACTTGAAAATCATGCTTTATAAATCATTTCACAAGCTATTGCTTGTGTAGCTTGAAACCATACTTAATAAATACTTTAGAAATCATTGTGTTACTCATTGCACTTGAATAGAGCTTTAATTTTGAGATTCCTCTGAAGCTTCCTTGATCTAACAAATTCATATTTTATCCTTCATTAATCCCTTGAACATGAAATATCCAAAATTTCCCTTAAATTTTCCCAAAATATCATAATAGCCCAAAACAACTCAATAACCCAACGGTGCCCATTGACATGGTTGTTGGGGCCAGCCACACATGTTCTAGGATCTTGTCGCATGCTAACCTCATTGAGGTGGGCCGTGCATTGTGTGCTAACCTCACAGTGAGGGATGCTGCACCCTGTGCACTAACCTCTTAACGCAAGGTCATGTGCGCAGCCTGAGCACATCCCTTGCGACTTGGCTGTGCCATGACCTTATCATGTGCATAAAAAATAGCCCAGAATAACCTCTAAGAACTAAAAGCACTCCCATAAACTCTAACATGCATCATACTGACCTACTGCCCATAACATCAATTTTCGTATAGAATACATGATACAACTTTGAAAAATCATAAAAATTCATAATTTTTTTTACAACACTTCATTTTTCAAGGTTTCTCTAAAATATCTTACTTTTGTTACCTCAAAATTTCAGAGAAAAACTCCAAAAGGCAGGCTTTGGAGCCCTCTGGGAAAGCATATTGCTCAGATTTTTCTTGAAAATGACATTCACACCTTTTTTGAACCAAAACACAAACCTTCTCACATCCAAATTGAGCAGTAACCCTCCTTAACAGTTGGAACCAAATTTGTTTTTTATCTTTTAAAACTAATTTGAGTGAATTTGCACGAGTGAGTTTTGAGAAACCTTTGATTGAAGGTCTCTATTTTATAGGGAGCCTTGCATGAAAATGAGTTGACACCTGATCTTTGATTAGACTCAGATCTTAAGCTCCTAATTACACCTCCTACTTGTCCTTCACACCGTCCTTGGCCGCAAAATGCATGAACTAGATTAAGACACTTGGATTTCACTTAAAATGATTGTTATAATCATGCCACATAATTGGCCTAATCTCATGGCTAACCTCCAATGCCCTCTCGCATTGCTTGGCAGCCTAACCTCTCAACACATAGTCCTTGGTCGCCTTGCTAACTTTTCAATGCATAGTCCTTTTTGTATAGTCTTGTCGACCAATGACAAGCTCTAGTTTGCATGTTAACCTCTAAAGCCATCTTGCAAAGCCTTGCTTCTCGTCGATGGCCTTCTCACAAAACCTCTCAAAGATAGCCTTCCTCATTGAAACTAACCTCTCAAGCCTTCTTGCCTAGCCATCAAAATGTCTAGACATCCCTTTAGAGGTTAGTTTTCATTATTTTGGCCTCTTAGTTCATGTCAAAACACCTAAGCTTGGAGGTTATTGAGCTTCATCTCGTCGCCCAACAAACATAATTTAGTTTGTCACCCAACAAACGCTCTAAACGCCCAATGTGTTTTTCTTTGACACTTACGCAAATTTTTCAAAATTTCCTAACTTTGACTTAACCATAAAATCTTTATGTATCTTCTAAGAATTTTTACCTTCTTTTTCTGACATCTTCCCTTTTCTCTTGTTTTTCACTAATCTTAACAAGTTCCAAATGTCTAAGAATTTTGGGGTTTCACATCGATAGCCTCGACACAACTGTAAAGGGGTTAAATGCCAAATTAAATGGGTTGGAAATGATAGTCTCTCAACTTCGTTCTTCTTTTTTGCAGGTTTCCTCAGCACTACAACACCTCACAGGTTTGATAGTTGCACATTTAAAGAATTGTTTACTCTCGAGCAACACTTAGATAGGATTTTCTCCTTTTAGATAGGATTAGAGCTTAAACACGACATATCCATGAGCAATTGTATGCACATAATGAAACAAGCAACTAGCATTGACGCTGACATGCTCAAAGGATAAGGACGAGTTGCGTAGCAGGGTATGAACATTTCCCACCTAAGCATGCTTATAAATACCCTTGAACTGCACTAGACATAGAGTAAGAGAAAAAATAGATACAACAAGTGCCCACACTCTGTAGAAGTTTATCCTTTCCCACCTCTTCTCTGATCAAATCTAAGTGAGAGCTTAGAGAAAGGTTAGAGAGAGAAGCCCAAAACCCATTCCCATAACTTGTAAAAGAGCCAAGGAATGCATAACAATGCATTTTACGACTTGACACCATTTCTTCATTTCTCAGTTTTTACCTTTGTGTATTGTTTGAAGTGGATGAATTTCATGGCCAAGAGGCCTATATTATTTATCAATACAATTCATGTTTAGTATCTTTATCATTCTCTTATGTCTTTACTCTACATACTCTTATCTTTGTGTTATAAATGATTTGAGTCTTTATGTTGTGTCATCAAAAGGTTTTACATATATAAAGATTACAACATTTAGTCTGAGCCTAATCCAAATGTCTAATTATACTATATATATATATATATATATATAAAGAATCAAGCAACGGTAG

mRNA sequence

ATGGGACGAAGTCCTTTGCCTTTCTCCAGAATCCAAACTTCTAACCCCACTCCAATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAGGTTTCCTCAGCACTACAACACCTCACAGAATCAAGCAACGGTAG

Coding sequence (CDS)

ATGGGACGAAGTCCTTTGCCTTTCTCCAGAATCCAAACTTCTAACCCCACTCCAATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAGGTTTCCTCAGCACTACAACACCTCACAGAATCAAGCAACGGTAG

Protein sequence

MGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLSTTTPHRIKQR*
Homology
[Close]
BLAST of CsGy3G020160 vs. NCBI nr
Match: KAE8650570.1 (hypothetical protein Csa_010819, partial [Cucumis sativus])

HSP 1 Score: 168 bits (425), Expect = 7.01e-52
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 19  MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP 78
           MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP
Sbjct: 1   MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP 60

Query: 79  DSRTSLIVYDPLFYNILMREDT 100
           DSRTSLIVYDPLFYNILMREDT
Sbjct: 61  DSRTSLIVYDPLFYNILMREDT 82

[Close]
BLAST of CsGy3G020160 vs. NCBI nr
Match: KAA0057618.1 (hypothetical protein E6C27_scaffold1312G00010 [Cucumis melo var. makuwa] >TYK14870.1 hypothetical protein E5676_scaffold1432G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 3.38e-06
Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0 

Query: 17  TPMRRSPLLPGHLPQS-LIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDE 76
           +P+RRS + P H P + LI N+D E   LNVP++   EGD   E + +          + 
Sbjct: 97  SPLRRSSVSPSHAPVNPLINNLDLEHIDLNVPIVNFVEGDVFAEKMVE----------EV 156

Query: 77  TLPDSRTSLIVYDPLFYNILMREDTGFLS 104
            + D +  LI+Y+PLF +I + ED G +S
Sbjct: 157 KIIDPKIPLIIYNPLFQDIPIEEDIGMIS 175

[Close]
BLAST of CsGy3G020160 vs. NCBI nr
Match: KAA0065578.1 (hypothetical protein E6C27_scaffold90G00160 [Cucumis melo var. makuwa] >TYK07144.1 hypothetical protein E5676_scaffold606G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 52.8 bits (125), Expect = 9.90e-06
Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 0 

Query: 6   LPFSRIQTSNPTPMRRSPLLPGHLPQ--SLIVNIDFERPHLNVPVITLSEGDAATEDVQD 65
           LP  +IQT + +P+ +  LL  H P   +LI+N+D ERP LNV V+ LSEG         
Sbjct: 23  LPPLKIQTPHSSPLCQKTLLLDHNPNFNTLIINLDPERPDLNVLVVNLSEG--------- 82

Query: 66  YGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLST 105
           Y  L +             +L VYDPLF  IL  ED    S+
Sbjct: 83  YTNLEN-------------ALTVYDPLFQGILAEEDVDETSS 102

[Close]
BLAST of CsGy3G020160 vs. NCBI nr
Match: KAA0040567.1 (hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK05610.1 hypothetical protein E5676_scaffold98G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 7.50e-04
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 34  IVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYN 93
           I+N+D E   LNVPV+ LSE +A+ E           A  +  + D    LIVYDP F +
Sbjct: 49  IINLDLEHIDLNVPVVNLSEWEASIE----------KAAEEVEIVDPNLPLIVYDPFFQD 108

Query: 94  ILMREDTGFLST 105
           I ++ED G  S+
Sbjct: 109 IPIKEDAGKTSS 110

[Close]
BLAST of CsGy3G020160 vs. NCBI nr
Match: KAA0054399.1 (hypothetical protein E6C27_scaffold24G001450 [Cucumis melo var. makuwa] >TYJ96826.1 hypothetical protein E5676_scaffold2750G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 8.34e-04
Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 0 

Query: 6   LPFSRIQTSNPTPMRRSPLLPGHLPQS-LIVNIDFERPHLNVPVITLSEGDAATEDVQDY 65
           LP  +IQT +  P+++  +L GH P +  I+N+D + P LNV ++ L EGD   E+    
Sbjct: 268 LPPPKIQTPHSFPLQQKTVLLGHAPSNPSIINLDSKYPDLNVSIVNLLEGDGDVENAAHN 327

Query: 66  GTLHDTAPHDET 76
            +  +TA +DET
Sbjct: 328 ASSLNTAANDET 339

[Close]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match: A0A0A0L6W4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263230 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 8.68e-68
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 1   MGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATED 60
           MGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATED
Sbjct: 16  MGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATED 75

Query: 61  VQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLST 105
           VQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTG +S+
Sbjct: 76  VQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGEMSS 120

[Close]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match: A0A5A7UR63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1432G00060 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.64e-06
Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0 

Query: 17  TPMRRSPLLPGHLPQS-LIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDE 76
           +P+RRS + P H P + LI N+D E   LNVP++   EGD   E + +          + 
Sbjct: 97  SPLRRSSVSPSHAPVNPLINNLDLEHIDLNVPIVNFVEGDVFAEKMVE----------EV 156

Query: 77  TLPDSRTSLIVYDPLFYNILMREDTGFLS 104
            + D +  LI+Y+PLF +I + ED G +S
Sbjct: 157 KIIDPKIPLIIYNPLFQDIPIEEDIGMIS 175

[Close]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match: A0A5D3C7C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00150 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.79e-06
Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 0 

Query: 6   LPFSRIQTSNPTPMRRSPLLPGHLPQ--SLIVNIDFERPHLNVPVITLSEGDAATEDVQD 65
           LP  +IQT + +P+ +  LL  H P   +LI+N+D ERP LNV V+ LSEG         
Sbjct: 23  LPPLKIQTPHSSPLCQKTLLLDHNPNFNTLIINLDPERPDLNVLVVNLSEG--------- 82

Query: 66  YGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLST 105
           Y  L +             +L VYDPLF  IL  ED    S+
Sbjct: 83  YTNLEN-------------ALTVYDPLFQGILAEEDVDETSS 102

[Close]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match: A0A5D3C2N8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00660 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.63e-04
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 34  IVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYN 93
           I+N+D E   LNVPV+ LSE +A+ E           A  +  + D    LIVYDP F +
Sbjct: 49  IINLDLEHIDLNVPVVNLSEWEASIE----------KAAEEVEIVDPNLPLIVYDPFFQD 108

Query: 94  ILMREDTGFLST 105
           I ++ED G  S+
Sbjct: 109 IPIKEDAGKTSS 110

[Close]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match: A0A5A7ULS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00200 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.04e-04
Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 0 

Query: 6   LPFSRIQTSNPTPMRRSPLLPGHLPQS-LIVNIDFERPHLNVPVITLSEGDAATEDVQDY 65
           LP  +IQT +  P+++  +L GH P +  I+N+D + P LNV ++ L EGD   E+    
Sbjct: 268 LPPPKIQTPHSFPLQQKTVLLGHAPSNPSIINLDSKYPDLNVSIVNLLEGDGDVENAAHN 327

Query: 66  GTLHDTAPHDET 76
            +  +TA +DET
Sbjct: 328 ASSLNTAANDET 339

The following BLAST results are available for this feature:
BLAST of CsGy3G020160 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G020160 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650570.17.01e-52100.00hypothetical protein Csa_010819, partial [Cucumis sativus][more]
KAA0057618.13.38e-0635.96hypothetical protein E6C27_scaffold1312G00010 [Cucumis melo var. makuwa] >TYK148... [more]
KAA0065578.19.90e-0638.24hypothetical protein E6C27_scaffold90G00160 [Cucumis melo var. makuwa] >TYK07144... [more]
KAA0040567.17.50e-0438.89hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK056... [more]
KAA0054399.18.34e-0437.50hypothetical protein E6C27_scaffold24G001450 [Cucumis melo var. makuwa] >TYJ9682... [more]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6W48.68e-6897.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263230 PE=4 SV=1[more]
A0A5A7UR631.64e-0635.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C7C34.79e-0638.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C2N83.63e-0438.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7ULS04.04e-0437.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CsGy3G020160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020160.2CsGy3G020160.2mRNA