CsGy3G017640 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G017640
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 13568501 .. 13568912 (-)
RNA-Seq ExpressionCsGy3G017640
SyntenyCsGy3G017640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATTATCGATTAAACCCAGTTTACTCCTCCAAATGCTTACCCAAAATTTTCACTTCACATCCTGGATGGAAAACCACAAATCGATTCAAGAACTTCTCCAAAGGGAACCTTCAGACCAAGGAAAAGCCCCAACTTTAACCCTCAAATTATCCTTACATTTAGTTCTGTAATGGGTGGTGAAACCCAAAACAAGACTTCACTAATTGCCGAAAAACTCACCCAAAACCCACCGGGGAGGAGATTGGACAGAGGGAAGATCGGCGCAGCGGGGCTCGGCGTTGGAGGAGAAGCTCGGCTCGCTCACGGCGTGCGGCCCGGAGAAAGAGATGGCGCGGCTCACAGCGTGCGGCCCGGAGAAAGAGATGGCGCGGCTCACAGCGTGGAGACGTCGTCGCTCACGGCTACTTGA

mRNA sequence

CAAAATTATCGATTAAACCCAGTTTACTCCTCCAAATGCTTACCCAAAATTTTCACTTCACATCCTGGATGGAAAACCACAAATCGATTCAAGAACTTCTCCAAAGGGAACCTTCAGACCAAGGAAAAGCCCCAACTTTAACCCTCAAATTATCCTTACATTTAGTTCTGTAATGGGTGGTGAAACCCAAAACAAGACTTCACTAATTGCCGAAAAACTCACCCAAAACCCACCGGGGAGGAGATTGGACAGAGGGAAGATCGGCGCAGCGGGGCTCGGCGTTGGAGGAGAAGCTCGGCTCGCTCACGGCGTGCGGCCCGGAGAAAGAGATGGCGCGGCTCACAGCGTGCGGCCCGGAGAAAGAGATGGCGCGGCTCACAGCGTGGAGACGTCGTCGCTCACGGCTACTTGA

Coding sequence (CDS)

ATGGGTGGTGAAACCCAAAACAAGACTTCACTAATTGCCGAAAAACTCACCCAAAACCCACCGGGGAGGAGATTGGACAGAGGGAAGATCGGCGCAGCGGGGCTCGGCGTTGGAGGAGAAGCTCGGCTCGCTCACGGCGTGCGGCCCGGAGAAAGAGATGGCGCGGCTCACAGCGTGCGGCCCGGAGAAAGAGATGGCGCGGCTCACAGCGTGGAGACGTCGTCGCTCACGGCTACTTGA

Protein sequence

MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRPGERDGAAHSVRPGERDGAAHSVETSSLTAT*
Homology
[Close]
BLAST of CsGy3G017640 vs. NCBI nr
Match: KGN57445.1 (hypothetical protein Csa_009817 [Cucumis sativus])

HSP 1 Score: 126 bits (316), Expect = 4.67e-36
Identity = 67/79 (84.81%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1  MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRPGERDGAAHSVR 60
          MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRP           
Sbjct: 1  MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRP----------- 60

Query: 61 PGERDGAAHSVETSSLTAT 79
           GERDGAAHSVETSSLTAT
Sbjct: 61 -GERDGAAHSVETSSLTAT 67

[Close]
BLAST of CsGy3G017640 vs. ExPASy TrEMBL
Match: A0A0A0L650 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186715 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 2.26e-36
Identity = 67/79 (84.81%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1  MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRPGERDGAAHSVR 60
          MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRP           
Sbjct: 1  MGGETQNKTSLIAEKLTQNPPGRRLDRGKIGAAGLGVGGEARLAHGVRP----------- 60

Query: 61 PGERDGAAHSVETSSLTAT 79
           GERDGAAHSVETSSLTAT
Sbjct: 61 -GERDGAAHSVETSSLTAT 67

The following BLAST results are available for this feature:
BLAST of CsGy3G017640 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G017640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57445.14.67e-3684.81hypothetical protein Csa_009817 [Cucumis sativus][more]
BLAST of CsGy3G017640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6502.26e-3684.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186715 PE=4 SV=1[more]
BLAST of CsGy3G017640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G017640.2CsGy3G017640.2mRNA