CsGy3G017440 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G017440
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
Location	Gy14Chr3: 13403849 .. 13405655 (+)
RNA-Seq Expression	CsGy3G017440
Synteny	CsGy3G017440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGAAGCGACTGGCTCGTTACCACTGAGAAGCGTGATCAAGAGGAAGAGACAAGAGTTTTCCGACGATGTTCCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTGAAGCAAACGACGGGGATCGTCGGTCTGGATGTTGTTCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTCCCCGAGGACGAAGGATACCGTAAGGCGGTTGAGAGCTTTACGCGGCACCGCTTGAAGGTCTGCCAGGAAGAAGAGGATTGGGAGAATATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCCCAGGACGAGCTCAAACTCATTGGTAAAATGATCGGTATGTGTTCAATTCATTGCCACCAAAATTTTAAGTTTACGAATTTGTGAAATTTTGTTGTCTGTAGATTTTCATTTCATTTTCTCGTCCTGTCTGTGTCTGGTTAGGATGGAATGTAAGAATTGGAAAAGGGAGGCATCAGGATTTGTAATCATATTTACATTTTTGCATTCCATTAGAATGACGAAAAAACATCTTCCCCCATGCCTTAGAGGATAAAAATTAACGACTTTCAAGGATTGAGAGTCAAGGAATGAAATTTGCATCTTGTTGCACTGAAAAACTTGGGCCACACCCATCAATTAGACCGTGTTTATCCTTCTTCCGTTCTACCCTTTTCTCATCTCGTCGAACCATTTTCCTTATCGCATAGCAGCAATATTTGATTTTCCTTTCGTCTTAACCTAAGATATTAGCTATCAAAATTGTCTAGGTATCTATTCATTTTACAGGAGTGGTATAAAGCTTCTTCAATGTATGAATCTCAGGTCCTTCGCTGGTCTTTAGCCACGATTTAGACTATTGGATCACCACTTGACCCATTAATATCTCTGAACTTTTTGAAGTTCGTCTTTTGTTCTCACTAAGGTGGATGAAAGTGCCATTTTGCAAAAGTCAACCTGGACTTATCAACTAGACAAGAAGCTTGAAATTCTTCACTAACGACAGAAATTATTTTCATACTGATTCACTGGCACTATATTTCTTTCTTTCCTCAATCTTAAGGAGGTTTGTTTGTTCAGCTTTTTAGTTTGATTGAGAGTGATTACTAGTTTGCCTAACTTGTCTGGTCTATTGCATTTGGAGAACACTTGAACTATTCCAGATATGGATCTTTGTAGAAATCTGTCAGTTCAACACAATTTGTTGGTGTTGTTTTAGTGATTAGTTTACTTCAACTATGCAGAGTGGGATCCCTGGGGTGTTCCTGATGACTACGAATGTGAAGTGATCGAGAATGATGCTCCAGTACCGAAGCACATTCCTTTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAGACGCTGGAGGCCATTAGTGGTGATAGTACTAAAAAAGTAGAGACACCCGAGAAAGCATCTCAGGTGACAGAATGACCTCTTTTTCATCATTTGAAGGATTCGAGTTTCGGATCCCGTTCTTTGTTTTTGGCTTTGATGTTATCTATTTTTGCTTGTTCCCCGATAGAGTGCCTGTATGCAGGGATTGTTCACAAAGTCATGTGTTTCAATAATCTCTATCCAATGTTGGAATTACATAAATTCACTTTTTCATTGCCTTGTTTACTTTTTACCGTGGACATCAAACCCCGTCATGGTTGGACTTTAGAATGAGCAATATTAAATTTAATTTTCCTACCATCTAAATACAAACTCTATAACTTTTTCCTGATTCGGAGGATAAATGATGATCAAATCAATAG

mRNA sequence

CCTGAAGCGACTGGCTCGTTACCACTGAGAAGCGTGATCAAGAGGAAGAGACAAGAGTTTTCCGACGATGTTCCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTGAAGCAAACGACGGGGATCGTCGGTCTGGATGTTGTTCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTCCCCGAGGACGAAGGATACCGTAAGGCGGTTGAGAGCTTTACGCGGCACCGCTTGAAGGTCTGCCAGGAAGAAGAGGATTGGGAGAATATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCCCAGGACGAGCTCAAACTCATTGGTAAAATGATCGAGTGGGATCCCTGGGGTGTTCCTGATGACTACGAATGTGAAGTGATCGAGAATGATGCTCCAGTACCGAAGCACATTCCTTTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAGACGCTGGAGGCCATTAGTGGTGATAGTACTAAAAAAGTAGAGACACCCGAGAAAGCATCTCAGGTGACAGAATGACCTCTTTTTCATCATTTGAAGGATTCGAGTTTCGGATCCCGTTCTTTGTTTTTGGCTTTGATGTTATCTATTTTTGCTTGTTCCCCGATAGAGTGCCTGTATGCAGGGATTGTTCACAAAGTCATGTGTTTCAATAATCTCTATCCAATGTTGGAATTACATAAATTCACTTTTTCATTGCCTTGTTTACTTTTTACCGTGGACATCAAACCCCGTCATGGTTGGACTTTAGAATGAGCAATATTAAATTTAATTTTCCTACCATCTAAATACAAACTCTATAACTTTTTCCTGATTCGGAGGATAAATGATGATCAAATCAATAG

Coding sequence (CDS)

ATGTTCCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTGAAGCAAACGACGGGGATCGTCGGTCTGGATGTTGTTCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTCCCCGAGGACGAAGGATACCGTAAGGCGGTTGAGAGCTTTACGCGGCACCGCTTGAAGGTCTGCCAGGAAGAAGAGGATTGGGAGAATATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCCCAGGACGAGCTCAAACTCATTGGTAAAATGATCGAGTGGGATCCCTGGGGTGTTCCTGATGACTACGAATGTGAAGTGATCGAGAATGATGCTCCAGTACCGAAGCACATTCCTTTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAGACGCTGGAGGCCATTAGTGGTGATAGTACTAAAAAAGTAGAGACACCCGAGAAAGCATCTCAGGTGACAGAATGA

Protein sequence

MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVIENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE*

Homology

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BLAST of CsGy3G017440 vs. ExPASy Swiss-Prot
Match: Q9FLX7 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.1e-76
Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAR VLI LYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TR RL VC+EEEDWE IEKRLGCGQVEELIEEA+DEL LIGKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETP 161
           ENDAP+PKH+P HRPGPLPE+FYKTLE +  +S  K E P
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAES--KTEIP 158

[Close]

BLAST of CsGy3G017440 vs. ExPASy Swiss-Prot
Match: Q559Z4 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyostelium discoideum OX=44689 GN=ndufa5 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.7e-18
Identity = 45/107 (42.06%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K++TGI GL V PNAR +L GLY++ LK+++ +P   GYRK+ E  T+ RL V + E D
Sbjct: 6   IKKSTGITGLKVEPNARHILAGLYNQLLKKLEILPPTAGYRKSAELETKFRLGVIENETD 65

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 121
              IE ++  GQ+EELI +A+++LK++  + E   W +PD  +  V+
Sbjct: 66  IVKIENKIYAGQIEELIVQAKNDLKVVDLVHESRAWELPDKNKPPVV 112

[Close]

BLAST of CsGy3G017440 vs. ExPASy Swiss-Prot
Match: P23935 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=9913 GN=NDUFA5 PE=1 SV=3)

HSP 1 Score: 82.0 bits (201), Expect = 7.0e-15
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCETPHERLKILYTKILDVLGHIPKNAAYRKYTEQITNEKLSMVKAEPD 64

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPW 110
            + +E+RL  GQ+EE+I +A++EL L  KMI+W PW
Sbjct: 65  VKKLEERLQGGQIEEVILQAENELSLARKMIQWKPW 100

[Close]

BLAST of CsGy3G017440 vs. ExPASy Swiss-Prot
Match: Q9CPP6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=10090 GN=Ndufa5 PE=1 SV=3)

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+KTL  ++  P+   YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCDTPHERLTILYTKTLDILKHFPKHAAYRKYTEQITNEKLDMVKAEPD 64

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPW 110
            + +E  L  G+VEE+I +A+ EL L  KM++W PW
Sbjct: 65  VKKLEALLQGGEVEEVILQAEKELSLARKMLKWKPW 100

[Close]

BLAST of CsGy3G017440 vs. ExPASy Swiss-Prot
Match: Q4R5J1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicularis OX=9541 GN=NDUFA5 PE=3 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-13
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCSTPHERLSILYTKILDVLAEIPKNAAYRKYTEQITNEKLAMVKAEPD 64

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPW 110
            + +E +L  GQ+EE+I +A+ EL L  KM +W PW
Sbjct: 65  VKKLEDQLQGGQLEEVILQAEHELSLARKMRDWKPW 100

[Close]

BLAST of CsGy3G017440 vs. NCBI nr
Match: XP_004140748.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis sativus] >KGN57450.2 hypothetical protein Csa_010484 [Cucumis sativus])

HSP 1 Score: 339 bits (869), Expect = 2.07e-117
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE
Sbjct: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168

[Close]

BLAST of CsGy3G017440 vs. NCBI nr
Match: XP_008439300.1 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 332 bits (851), Expect = 1.15e-114
Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQVTE 168

[Close]

BLAST of CsGy3G017440 vs. NCBI nr
Match: KAA0033708.1 (putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 [Cucumis melo var. makuwa] >TYK23001.1 putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 [Cucumis melo var. makuwa])

HSP 1 Score: 327 bits (838), Expect = 1.23e-112
Identity = 161/165 (97.58%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQ 165
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQ
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQ 165

[Close]

BLAST of CsGy3G017440 vs. NCBI nr
Match: XP_023553539.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321 bits (822), Expect = 3.05e-110
Identity = 158/168 (94.05%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           T HRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KVE+ EK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVESAEKTSQVTE 168

[Close]

BLAST of CsGy3G017440 vs. NCBI nr
Match: XP_022923143.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita moschata])

HSP 1 Score: 320 bits (821), Expect = 4.33e-110
Identity = 157/168 (93.45%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           T HRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KV++ +K SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAKKTSQVTE 168

[Close]

BLAST of CsGy3G017440 vs. ExPASy TrEMBL
Match: A0A1S3AZ47 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484126 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 5.58e-115
Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQVTE 168

[Close]

BLAST of CsGy3G017440 vs. ExPASy TrEMBL
Match: A0A5D3DH67 (Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001080 PE=3 SV=1)

HSP 1 Score: 327 bits (838), Expect = 5.95e-113
Identity = 161/165 (97.58%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQ 165
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQ
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQ 165

[Close]

BLAST of CsGy3G017440 vs. ExPASy TrEMBL
Match: A0A6J1E8S3 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430895 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 2.10e-110
Identity = 157/168 (93.45%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           T HRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KV++ +K SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAKKTSQVTE 168

[Close]

BLAST of CsGy3G017440 vs. ExPASy TrEMBL
Match: A0A6J1JA00 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482620 PE=3 SV=1)

HSP 1 Score: 320 bits (819), Expect = 4.23e-110
Identity = 157/168 (93.45%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           T HRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KV++ EK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAEKTSQVTE 168

[Close]

BLAST of CsGy3G017440 vs. ExPASy TrEMBL
Match: A0A6J1CII6 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011683 PE=3 SV=1)

HSP 1 Score: 317 bits (811), Expect = 7.02e-109
Identity = 157/168 (93.45%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGL+VVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLEVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEE+DWE IEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEDDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168
           ENDA VPKHIPLHRPGPLPEEFYKTLEAI G S++KVET EKASQVTE
Sbjct: 121 ENDASVPKHIPLHRPGPLPEEFYKTLEAIGGGSSQKVETAEKASQVTE 168

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BLAST of CsGy3G017440 vs. TAIR 10
Match: AT5G52840.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 285.4 bits (729), Expect = 2.9e-77
Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAR VLI LYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
           TR RL VC+EEEDWE IEKRLGCGQVEELIEEA+DEL LIGKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETP 161
           ENDAP+PKH+P HRPGPLPE+FYKTLE +  +S  K E P
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAES--KTEIP 158

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BLAST of CsGy3G017440 vs. TAIR 10
Match: AT4G28005.1 (BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-26
Identity = 71/157 (45.22%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MF R IGRPLLAKVKQTTGIV                                       
Sbjct: 1   MFQRVIGRPLLAKVKQTTGIV--------------------------------------- 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120
                +VC EEEDW  IEKRL CG+VEELIEEA DEL L+GKMI              +I
Sbjct: 61  -----EVCPEEEDWGVIEKRLACGKVEELIEEASDELTLVGKMI--------GSLHPNLI 103

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKV 158
              AP+PKH+P HRPGPLPEEFY+TL+A++ +S  ++
Sbjct: 121 L--APIPKHVPHHRPGPLPEEFYRTLQAVNSESKTEI 103

The following BLAST results are available for this feature:

BLAST of CsGy3G017440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX7	4.1e-76	86.88	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
Q559Z4	6.7e-18	42.06	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyos...	[more]
P23935	7.0e-15	42.71	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=99...	[more]
Q9CPP6	2.2e-13	41.67	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=...	[more]
Q4R5J1	3.8e-13	40.63	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicula...	[more]

BLAST of CsGy3G017440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140748.1	2.07e-117	100.00	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_008439300.1	1.15e-114	97.62	PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5...	[more]
KAA0033708.1	1.23e-112	97.58	putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 [Cucumis m...	[more]
XP_023553539.1	3.05e-110	94.05	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_022923143.1	4.33e-110	93.45	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]

BLAST of CsGy3G017440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZ47	5.58e-115	97.62	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A5D3DH67	5.95e-113	97.58	Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis...	[more]
A0A6J1E8S3	2.10e-110	93.45	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A6J1JA00	4.23e-110	93.45	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A6J1CII6	7.02e-109	93.45	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]

BLAST of CsGy3G017440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52840.1	2.9e-77	86.88	NADH-ubiquinone oxidoreductase-related	[more]
AT4G28005.1	2.4e-26	45.22	BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-relat...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	PFAM	PF04716	ETC_C1_NDUFA5	coord: 22..88 e-value: 1.9E-27 score: 94.9
IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	PANTHER	PTHR12653	NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT	coord: 1..161
None	No IPR available	PANTHER	PTHR12653:SF1	BNAA02G10640D PROTEIN	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G017440.1	CsGy3G017440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045271	respiratory chain complex I