CsGy3G017230 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G017230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	rRNA 2'-O-methyltransferase fibrillarin
Location	Gy14Chr3: 13248462 .. 13252002 (+)
RNA-Seq Expression	CsGy3G017230
Synteny	CsGy3G017230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTGAAACCCTAGGTTACCGTCCCCCAAAACCTCGCGCCCCCTATATATTTAAAACCCTAAACCATCGTTCTTACTTCGTGCTACTTTTCCATTGTTCTAAAACCCTAGCCGGAACTATCCTTCGCCGTCCCCTCTCTCAGTCACTGAAATGAGACCTCCTCGAGGTAGATACCACAAACTAGCAGTTCATCTACTCTTTGCGCTTTCTATTTTTAAGTTCTTGAGAATTATCTGTTGACTATAATGGAGAATAATAGTTCTAGCGCAATGTATTGTTTATCTGCTTTGGTGAATGAGTATGATCGTTTCCCTTCTTACTTCCTACTAAATCTGTTCCTATGTAATATCGTTGGACCGGTTGTTTGATAGTTGAGTCATGCTGTTTAGTGTTATTTTTTTTCTTCTGCTTGTTTCATACAGTCTCTTTCACTTTGTGTGTGTTTGTAATCTGGATAAGTTGGATATGTGCAGGCCGCGGCGGTGGTGGTGGGTTTAGGGGCAGAGGTGATGGAGGAAGGGGAGGCAGAGGCAGAGGTGGCGGTGGAGGTAGAGGCGGCGGTGGTGGTAGAGGTATGTCAAGCCGTGGTGGTGGTCGTGGAGGTGGAGGTGGAAGAGGTCGTGGTGGAGGTAGAGGAGGGGGTATGAAAGGTGGAAGCAAAGTTGTTGTTGAACCTCATAGACATGAGGGTATTTTCATAGCTAAGGGTAAAGAAGATGCTCTTGTCACGAAGAATATGGTAACTGGAGAATCTGTCTACAACGAGAAGAGGGTATCCGTACAGGTGATTCTCGTTTAATAGTTATTTTCCAACAGAATGTGTTTTAGGTTTCAAATGACATTTATCAATGGGGGACTGTTATTTTGCAAAGTTTTCATGTGTTTTTGATGTATTGTTATTACTCACGAGAAATTCCGGTTAGTGTTGTGGCACAATAGTCGGTGATTGTTATTTTTTTGTTATTTGAATGATTTATTTAAGTCTATAGGTAGAACATCAACGCCTGTAGCTAATTATTGATATGTTATGCCATTCAGAATGAAGATGGAACAAAAATTGAGTACAGAGTTTGGAACCCATTTAGGTCTAAGTTGGCTGCTGCCGTTCTTGGTGGTGTTGATGACATATGGATTGTAAGTGCTTTTCACCTCCAACTGGATGTTTTAGTCGTTTAACTGTTTCACTCTGTAGTTTGTTCCCTTTTTTTCTTCCTAAATAGTTTGGTTACGTGTATATTGTAGAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACAGTATCTCACGTCTCAGATGTTGTTGGCCCTGTAAGTATTTATCTAAAGAGTATCTTTTGGAATTTTTCTTGACCTGATTATATGTTTACTTAATGATTGTTGTTGATTTTATTTTCAGTCCGGTATAGTGTATGCTGTTGAATTCTCCCATAGAAGTGGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATTATTGAAGATGCTAGACACCCAGCTAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGTTCACTCTTTTTCTTTTTAAATTCTTCTCATTTATCCTTATTATTCTCGTATGCAAACATGAATAAAATCGTAGCTCTTGTATTTTGTTTTCCCCCTTAATAACCCTTTCTAAGTTGTATTCAATGTAATTCTTTCTATATACTGTTTTCTTTCTCAACAATTGTGTTCATATTCACTCCATCTTTTTCGACACTAAACCCTTTTCTACCCGAATTATTTAGCATATGACGAATTACTCGGATTCCCCTTCAAGACTTCTTGAATGATGCACAACCCGAGTTTCTGATGCTTGAAGAAATACTTTTGAATTGGCTTGATAAATTATTTCTAAATTCCAGTCTTTTTGTCTGATCAGCAGTTTTTTTTTCCAATTTTTTCATTGTGTTTTCCCATTTCCGATTGTTCATCATCCTATTTTATTGTATCTCCTCTACTTGTGTGATTGAGTTGTCCCTTTGGGGTTTTTCGTCTATTCCTGATTATTTTTTTGTTATTATTTTTGCACGTCATTGATTTTTTTAAATCTATGCGTTGATACTAATCAACTTGTTTTCTAAGCACTTTTTGCAATAATTTGGCATTTTATCTTTTACCTGTTACTAGAATAGGTCATTTATATTTTGATCTGGACACTCCATCATGTAGTCTAGTGGTAAAAAGGGAAATGGTCTTGATAACTATAATGAAGTGGTCATACGTTCAATCCATCCATGACCGCATTCTTTCAAAATTAATATTTTTTGAGTTTTTTTACATTCAAATGTTGTAGAGTCAGAGTTGGTGTCTTTATATAAGTTGAGTTGTGTGTAAGTTGTGACTTGGACACTTGTGAATATAAAAAGATGGTAGGGTCTTTCTAGGTATTACCTTTCTTATCCCCACCCTCCCCTAGAAAAATAAGTAAATTAACGAACTTTTGCATATTTGAGTAGTTATGGTAATGATCGATTCTGGATCTGCAAAAAAAAAAAGATAATCTACCCTGTATCGTTCAATTTTGGAGGTTTATAATCTTTCTTCGAGTCTACTTGAATCAGAGTAGAGAAGTGAGAAAAATAAGGAAGGAGAACAGTTATCTACATTTTTTATATCATCTGTCTAGAAATGGGATTAATGGTATTGTCCTACAACTTTGTGAGCCGTAGGTCTGTCACCAACTCCGTTCAGATTATATTATTGTTTGATAATAGTTTTGTTCTCATTTTCTTTAATCATTCTGCACTTATAACTGCTATTGAACATAAAGCTATGTAGATATCTTTCTTATCACTATTTTTGCCTTTTGGGCTCTTCTCTTTTCTAAGCATGTGATGAATTACTCGGATTCCCCTTCAAGACATCTTGAATGATGCACAACCCGAGTTTCTGATGCGTCCAGGAATAATGTCTCATACATTGATGAAACTGAACACTTCATCAGTCACTCATTAATGTGTCATTGAACAATGTTTCAATTTCTTACATTTGGCATGGTTTTAACAACATCCCTTCAATGCAGGCAAGAATCTTAGCACTTAATGCGTCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCTATCAAGGCCAACTGCATTGACTCGACAGTTCCTGCAGAGGCTGTGTTTGCAAGTGAAGTTAATAAGCTCAAAGCAGATCAGTTCAAACCGACTGAGCAGGTGACCCTCGAACCATTCGAGCGAGATCATGCTTGTGTTGTTGGTATCTATAGGGCGCCAAAGAAACAGAAGGCTGCTGCAGCTTCTTAGACAGTCAAAACTGTGATCTGTAGTTTATCAATGTTTCTTATCAATAGCTTGTAGGGGCGTAGGTGAGGCCTTGACGTTAAAAGAAAACCAATATAACTCAGATTGTAAGATTTTTATCGTTCACAATTTTGGTGATTATTGAGGAAAGAACTTCTGCATCTTTTTTCTTCTTCTTACTGCATCTTTTATTTCTTATTAAACC

mRNA sequence

CAAATTGAAACCCTAGGTTACCGTCCCCCAAAACCTCGCGCCCCCTATATATTTAAAACCCTAAACCATCGTTCTTACTTCGTGCTACTTTTCCATTGTTCTAAAACCCTAGCCGGAACTATCCTTCGCCGTCCCCTCTCTCAGTCACTGAAATGAGACCTCCTCGAGGCCGCGGCGGTGGTGGTGGGTTTAGGGGCAGAGGTGATGGAGGAAGGGGAGGCAGAGGCAGAGGTGGCGGTGGAGGTAGAGGCGGCGGTGGTGGTAGAGGTATGTCAAGCCGTGGTGGTGGTCGTGGAGGTGGAGGTGGAAGAGGTCGTGGTGGAGGTAGAGGAGGGGGTATGAAAGGTGGAAGCAAAGTTGTTGTTGAACCTCATAGACATGAGGGTATTTTCATAGCTAAGGGTAAAGAAGATGCTCTTGTCACGAAGAATATGGTAACTGGAGAATCTGTCTACAACGAGAAGAGGGTATCCGTACAGAATGAAGATGGAACAAAAATTGAGTACAGAGTTTGGAACCCATTTAGGTCTAAGTTGGCTGCTGCCGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACAGTATCTCACGTCTCAGATGTTGTTGGCCCTTCCGGTATAGTGTATGCTGTTGAATTCTCCCATAGAAGTGGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATTATTGAAGATGCTAGACACCCAGCTAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGCAAGAATCTTAGCACTTAATGCGTCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCTATCAAGGCCAACTGCATTGACTCGACAGTTCCTGCAGAGGCTGTGTTTGCAAGTGAAGTTAATAAGCTCAAAGCAGATCAGTTCAAACCGACTGAGCAGGTGACCCTCGAACCATTCGAGCGAGATCATGCTTGTGTTGTTGGTATCTATAGGGCGCCAAAGAAACAGAAGGCTGCTGCAGCTTCTTAGACAGTCAAAACTGTGATCTGTAGTTTATCAATGTTTCTTATCAATAGCTTGTAGGGGCGTAGGTGAGGCCTTGACGTTAAAAGAAAACCAATATAACTCAGATTGTAAGATTTTTATCGTTCACAATTTTGGTGATTATTGAGGAAAGAACTTCTGCATCTTTTTTCTTCTTCTTACTGCATCTTTTATTTCTTATTAAACC

Coding sequence (CDS)

ATGAGACCTCCTCGAGGCCGCGGCGGTGGTGGTGGGTTTAGGGGCAGAGGTGATGGAGGAAGGGGAGGCAGAGGCAGAGGTGGCGGTGGAGGTAGAGGCGGCGGTGGTGGTAGAGGTATGTCAAGCCGTGGTGGTGGTCGTGGAGGTGGAGGTGGAAGAGGTCGTGGTGGAGGTAGAGGAGGGGGTATGAAAGGTGGAAGCAAAGTTGTTGTTGAACCTCATAGACATGAGGGTATTTTCATAGCTAAGGGTAAAGAAGATGCTCTTGTCACGAAGAATATGGTAACTGGAGAATCTGTCTACAACGAGAAGAGGGTATCCGTACAGAATGAAGATGGAACAAAAATTGAGTACAGAGTTTGGAACCCATTTAGGTCTAAGTTGGCTGCTGCCGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACAGTATCTCACGTCTCAGATGTTGTTGGCCCTTCCGGTATAGTGTATGCTGTTGAATTCTCCCATAGAAGTGGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATTATTGAAGATGCTAGACACCCAGCTAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGCAAGAATCTTAGCACTTAATGCGTCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCTATCAAGGCCAACTGCATTGACTCGACAGTTCCTGCAGAGGCTGTGTTTGCAAGTGAAGTTAATAAGCTCAAAGCAGATCAGTTCAAACCGACTGAGCAGGTGACCCTCGAACCATTCGAGCGAGATCATGCTTGTGTTGTTGGTATCTATAGGGCGCCAAAGAAACAGAAGGCTGCTGCAGCTTCTTAG

Protein sequence

MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAAAS*

Homology

[Close]

BLAST of CsGy3G017230 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 446.8 bits (1148), Expect = 2.0e-124
Identity = 263/321 (81.93%), Postives = 277/321 (86.29%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGG-RGGRGRGG-GGGRGG---GGGRGMSSRGGGRGGGGGRGR 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG S R GGRG G G  R
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDR-GGRGRGRGPPR 60

Query: 61  GGGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSV 120
           GG RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKR+SV
Sbjct: 61  GGARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISV 120

Query: 121 QNEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPS 180
           QNEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP 
Sbjct: 121 QNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPE 180

Query: 181 GIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR 240
           G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR
Sbjct: 181 GCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR 240

Query: 241 ILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFER 300
           ILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFER
Sbjct: 241 ILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFER 300

Query: 301 DHACVVGIYRAPKKQKAAAAS 310
           DHACVVG YR PKK KAA A+
Sbjct: 301 DHACVVGGYRMPKKPKAATAA 320

[Close]

BLAST of CsGy3G017230 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.7e-123
Identity = 258/312 (82.69%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGR-GMSSRGG--GRGGGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR G   R G  GRG G  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKI 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKR+SVQNEDGTK+
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 240
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASF 240

Query: 241 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI 300
           FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG 
Sbjct: 241 FLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGG 300

Query: 301 YRAPKKQKAAAA 309
           YR PKKQK  A+
Sbjct: 301 YRMPKKQKTPAS 308

[Close]

BLAST of CsGy3G017230 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.1e-109
Identity = 230/309 (74.43%), Postives = 255/309 (82.52%), Query Frame = 0


Query: 5   RGRGGGGGFRGRG--DGGRGGRGRGGG--------GGRGGGGGRGMSSRGGGRGGGGGRG 64
           RGRGGGG   GRG   GGRGG GRGGG        GGRGGGGGRG   RGGG  GGGGR 
Sbjct: 41  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGR- 100

Query: 65  RGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGT 124
             GG  GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKR+SV+N +G 
Sbjct: 101 --GGGAGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGE 160

Query: 125 KIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAV 184
           KIEYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAV
Sbjct: 161 KIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAV 220

Query: 185 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 244
           EFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA
Sbjct: 221 EFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNA 280

Query: 245 SYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 304
            +FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+ERDHA VV
Sbjct: 281 QHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVVV 340

[Close]

BLAST of CsGy3G017230 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 7.5e-108
Identity = 233/331 (70.39%), Postives = 259/331 (78.25%), Query Frame = 0


Query: 6   GRGGGGGFRGRGDGG-------RGGRGRGGGGGRGG----GGGRGMSSRGGGRGGG---- 65
           G GGGGGFRGRG GG        GGRGRGGGG RGG    GGGRG   RGGG GGG    
Sbjct: 15  GGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAF 74

Query: 66  GGRGRGGGRG------------------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTK 125
           GGRG GGGRG                  GG KGG  V +EPHRHEG+FIA+GKEDALVT+
Sbjct: 75  GGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTVTIEPHRHEGVFIARGKEDALVTR 134

Query: 126 NMVTGESVYNEKRVSVQNEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGA 185
           N V G  VY EKR+SV+  +G KIEYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGA
Sbjct: 135 NFVPGSEVYGEKRISVET-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGA 194

Query: 186 ASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG 245
           ASGTTVSHVSDVVGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVG
Sbjct: 195 ASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVG 254

Query: 246 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKA 304
           MVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFA+EV K++A
Sbjct: 255 MVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQA 314

[Close]

BLAST of CsGy3G017230 vs. ExPASy Swiss-Prot
Match: P22509 (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 8.3e-107
Identity = 229/304 (75.33%), Postives = 254/304 (83.55%), Query Frame = 0


Query: 6   GRGGGGGF-RGRGDGGRGGRGRGGGGG--RGGGGGRGMSSRGGGRGGGGGRGRGGGRGG- 65
           GRGG GGF  GRG  G GGRGRGGGGG  RG GGG G   RGGG   GGGRGRGGGRGG 
Sbjct: 27  GRGGRGGFGGGRGGFGGGGRGRGGGGGGFRGRGGGGG---RGGGFQSGGGRGRGGGRGGK 86

Query: 66  -GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 125
            G + G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKRVS+ +E   KIEYR 
Sbjct: 87  RGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSI-SEGDDKIEYRA 146

Query: 126 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 185
           WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRS
Sbjct: 147 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS 206

Query: 186 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 245
           GRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ 
Sbjct: 207 GRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRN 266

Query: 246 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 305
           GGHFVISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR P
Sbjct: 267 GGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPP 326

[Close]

BLAST of CsGy3G017230 vs. NCBI nr
Match: XP_004140765.1 (mediator of RNA polymerase II transcription subunit 36a [Cucumis sativus])

HSP 1 Score: 561 bits (1445), Expect = 1.60e-200
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAAAS 309
           KKQKAAAAS
Sbjct: 301 KKQKAAAAS 309

[Close]

BLAST of CsGy3G017230 vs. NCBI nr
Match: XP_008439295.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo])

HSP 1 Score: 550 bits (1418), Expect = 1.86e-196
Identity = 303/308 (98.38%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAAA 308
           KKQKAAAA
Sbjct: 301 KKQKAAAA 306

[Close]

BLAST of CsGy3G017230 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548 bits (1411), Expect = 2.09e-195
Identity = 300/307 (97.72%), Postives = 305/307 (99.35%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM+SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKR+SVQNEDGTK+EYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAA 307
           KKQKAAA
Sbjct: 301 KKQKAAA 305

[Close]

BLAST of CsGy3G017230 vs. NCBI nr
Match: XP_022141240.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 545 bits (1405), Expect = 1.71e-194
Identity = 298/307 (97.07%), Postives = 304/307 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM+SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKR+SVQNEDGTK+EYRV
Sbjct: 61  GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAA 307
           KKQK AA
Sbjct: 301 KKQKPAA 305

[Close]

BLAST of CsGy3G017230 vs. NCBI nr
Match: XP_022945875.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata] >XP_022968445.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG6574193.1 rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 544 bits (1401), Expect = 6.97e-194
Identity = 300/307 (97.72%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRG GGGRGM+SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGFGGGRGMASRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAA 307
           KKQK AA
Sbjct: 301 KKQKPAA 305

[Close]

BLAST of CsGy3G017230 vs. ExPASy TrEMBL
Match: A0A0A0L9V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1)

HSP 1 Score: 561 bits (1445), Expect = 7.72e-201
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAAAS 309
           KKQKAAAAS
Sbjct: 301 KKQKAAAAS 309

[Close]

BLAST of CsGy3G017230 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 9.00e-197
Identity = 303/308 (98.38%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAAA 308
           KKQKAAAA
Sbjct: 301 KKQKAAAA 306

[Close]

BLAST of CsGy3G017230 vs. ExPASy TrEMBL
Match: A0A6J1CHH3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charantia OX=3673 GN=LOC111011688 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 8.30e-195
Identity = 298/307 (97.07%), Postives = 304/307 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM+SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKR+SVQNEDGTK+EYRV
Sbjct: 61  GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAA 307
           KKQK AA
Sbjct: 301 KKQKPAA 305

[Close]

BLAST of CsGy3G017230 vs. ExPASy TrEMBL
Match: A0A6J1HX74 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111467690 PE=3 SV=1)

HSP 1 Score: 544 bits (1401), Expect = 3.38e-194
Identity = 300/307 (97.72%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRG GGGRGM+SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGFGGGRGMASRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAA 307
           KKQK AA
Sbjct: 301 KKQKPAA 305

[Close]

BLAST of CsGy3G017230 vs. ExPASy TrEMBL
Match: A0A6J1G280 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111449984 PE=3 SV=1)

HSP 1 Score: 544 bits (1401), Expect = 3.38e-194
Identity = 300/307 (97.72%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRG GGGRGM+SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGFGGGRGMASRGGGR--GGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAA 307
           KKQK AA
Sbjct: 301 KKQKPAA 305

[Close]

BLAST of CsGy3G017230 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-125
Identity = 263/321 (81.93%), Postives = 277/321 (86.29%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGG-RGGRGRGG-GGGRGG---GGGRGMSSRGGGRGGGGGRGR 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG S R GGRG G G  R
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDR-GGRGRGRGPPR 60

Query: 61  GGGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSV 120
           GG RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKR+SV
Sbjct: 61  GGARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISV 120

Query: 121 QNEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPS 180
           QNEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP 
Sbjct: 121 QNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPE 180

Query: 181 GIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR 240
           G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR
Sbjct: 181 GCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR 240

Query: 241 ILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFER 300
           ILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFER
Sbjct: 241 ILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFER 300

Query: 301 DHACVVGIYRAPKKQKAAAAS 310
           DHACVVG YR PKK KAA A+
Sbjct: 301 DHACVVGGYRMPKKPKAATAA 320

[Close]

BLAST of CsGy3G017230 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-124
Identity = 258/312 (82.69%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGR-GMSSRGG--GRGGGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR G   R G  GRG G  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKI 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKR+SVQNEDGTK+
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 240
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASF 240

Query: 241 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI 300
           FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG 
Sbjct: 241 FLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGG 300

Query: 301 YRAPKKQKAAAA 309
           YR PKKQK  A+
Sbjct: 301 YRMPKKQKTPAS 308

[Close]

BLAST of CsGy3G017230 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 344.7 bits (883), Expect = 7.5e-95
Identity = 198/307 (64.50%), Postives = 232/307 (75.57%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGR- 60
           M+PP+        RGRG G RGGRG          GG G + RG GRGG  GRGRG GR 
Sbjct: 1   MKPPQ--------RGRGGGVRGGRGL-------ARGGEGSAVRGSGRGGESGRGRGPGRV 60

Query: 61  ----GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTK 120
                GG+KGGSKV+V PHRH G+F+AK K DALVTKN+V GE +YNEKR+ VQNED + 
Sbjct: 61  KSESDGGIKGGSKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRST 120

Query: 121 IEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVE 180
           +EYRVWNP RSKLA A+  GVD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAVE
Sbjct: 121 VEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVE 180

Query: 181 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 240
            S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNAS
Sbjct: 181 HSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNAS 240

Query: 241 YFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVG 300
           YFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+  E  HACV G
Sbjct: 241 YFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVFG 292

Query: 301 IYRAPKK 303
            YR P+K
Sbjct: 301 GYRLPRK 292

[Close]

BLAST of CsGy3G017230 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 311.6 bits (797), Expect = 7.0e-85
Identity = 190/230 (82.61%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGR-GMSSRGG--GRGGGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR G   R G  GRG G  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKI 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKR+SVQNEDGTK+
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 227
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:

BLAST of CsGy3G017230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH9	2.0e-124	81.93	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q9FEF8	1.7e-123	82.69	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	3.1e-109	74.43	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	7.5e-108	70.39	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P22509	8.3e-107	75.33	rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=...	[more]

BLAST of CsGy3G017230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140765.1	1.60e-200	100.00	mediator of RNA polymerase II transcription subunit 36a [Cucumis sativus]	[more]
XP_008439295.1	1.86e-196	98.38	PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis...	[more]
XP_023552409.1	2.09e-195	97.72	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]
XP_022141240.1	1.71e-194	97.07	mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti...	[more]
XP_022945875.1	6.97e-194	97.72	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita mosc...	[more]

BLAST of CsGy3G017230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9V7	7.72e-201	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1	[more]
A0A1S3AY25	9.00e-197	98.38	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]
A0A6J1CHH3	8.30e-195	97.07	mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charan...	[more]
A0A6J1HX74	3.38e-194	97.72	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A6J1G280	3.38e-194	97.72	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo...	[more]

BLAST of CsGy3G017230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25630.1	1.4e-125	81.93	fibrillarin 2	[more]
AT5G52470.1	1.2e-124	82.69	fibrillarin 1	[more]
AT5G52490.1	7.5e-95	64.50	Fibrillarin family protein	[more]
AT5G52470.2	7.0e-85	82.61	fibrillarin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 117..136 score: 75.71 coord: 144..165 score: 79.22 coord: 194..223 score: 70.24 coord: 224..253 score: 67.62 coord: 169..186 score: 72.22 coord: 276..297 score: 61.36 coord: 89..108 score: 62.5
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 71..299 e-value: 4.1E-172 score: 587.8
IPR000692	Fibrillarin	PIRSF	PIRSF006540	Nop17p	coord: 19..301 e-value: 2.8E-121 score: 401.5
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 71..298 e-value: 2.0E-109 score: 364.0
IPR000692	Fibrillarin	HAMAP	MF_00351	RNA_methyltransf_FlpA	coord: 85..298 score: 36.939556
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 66..121 e-value: 3.4E-29 score: 102.5
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 122..299 e-value: 3.0E-88 score: 296.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 4..306
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 4..306
IPR020813	Fibrillarin, conserved site	PROSITE	PS00566	FIBRILLARIN	coord: 169..183
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 69..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G017230.1	CsGy3G017230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031428	box C/D RNP complex
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity