CsGy3G016920 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G016920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Methyl-CpG-binding domain-containing protein 13 isoform X1
Location	Gy14Chr3: 13000485 .. 13005298 (-)
RNA-Seq Expression	CsGy3G016920
Synteny	CsGy3G016920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGACGTTACCGGAACCTCTAGCGCTTTCAATCCTCTGCTTTACTTCCAATTACTTAACATACTCCTCCACCTTAACCGTTGGTAACATTTGAATTCACCTCCTTTTTCGGGTCCAAAGAACCAATCCAAGATCCTCAAAGATGGGTTGTACAGAATTTTGAAGGGAAGACTTGTAGAGGATAATCCATGGGGTTCCGACACGTTTATATGACTCGCAGGGTATTTCTCAGAACACGTGGTTTTGAAAGAATATTTTGTCGGAATCCTCCATTTCTAACGTCCTCTTCAAGAGATTTGACTCTAAAATCAGAAACTTGGGTGCCTGAAAGAGAGAAAAATAGAGAGGGTTATTGAGATTGACCGGTGGGTGAACGGAAAGTCTGAGTTTTCCGGGTGAATGATGAACCAAAATTCAAAAGACTTGCTACCACCTGGCTGGACTGTGAAAGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGGTACTGATTTTTCTTGTCAATGGGTTTTCTTTCCCTTTGATTTCTTTTTACTTGCATTTCGTAGATCTTTAGCTGTTTTGTAAGTTTTATGTTCTACGTTGCTGTTACAACTAGCTCTTGATTTGATTTCACTCTCCTGCTCAACTTGTGTGCTGTTGGTGTATACGGAAAATGTGTTCTTTTTGCCTTGTTAGTTAGTGGTGGGAATGCAACCGAAGTCCCATAGATAAGGCCTAAGGGACGATAATGAGTATATCTTCGTTATTATGAGGAGGCCTTTTGATTTCATTAGTACGAGGCCTTTGGAGTGTTGCTCACCTAGGTGTTAGAAACTATGACTTCTGATGGGAAATTTTGGCTGTGTAGACAGTTAAAAGAAAGGAGATAGATGACTAATATTTGGGGAGAAAGTGTGTTGTCTTGTGTATGCTTCTGATATTGGACCTATTAGCTAAAACTTTCCTATGACTTTCTGATCTGAGTAAATGACTTGCCTTCTTCAGCTCCTATGGCTATGATTCCCTCATATAATTTTTGGCCAAGTTTTCCCATCAGTTTAAAGTTTCTATTTGCATTGTGAATGAACTATTTTTTATCTCTTGTTAGGCCCTTTCTGTTTAGGCTTGTGTGAAACAGCAAACTGTAATGTCATTTTTCATTCAAAAGATGCAAGATGCAACTAAAGCTTGCGTTAGTGTAACTTCCATTAACATCTTAACAAAAGAACATGTTTCTTCCTCCTAATGTCTTCTGGTTATTTGCTTTTGGTATTCAAATATGTTTTTTTTTTTTTTTTTTGATAAGAGAAAAAGAAAAAGGTATTCAAATATGTATTTGATAACCATGAATCCTATTATCATGTGGAACGTTAATACGAAAAGGAAGTCTGTATAAAGATCAGATAACTGATGGTGGCCAATAATGTTCTGTTCATTTTAAGATAAATAATTAGTTGGATCTTTGTGACTGATTCTAATGTTGCAGTATTATTTTGAACCCTCAAGTCAAATGAGATTTAATTCTAGGGCAGAGGTGTTTAGATACCTCAAAACTGCAGCTATCTGTCATCCTGAATCTGAAGAGAGCAGAACCGTCAAGGAACCAGGGAACAATGTCTGTCAAAAAAATCTACCCTCTACTCTATTTTTTGTGTTCCAATTCGCTGGTCTTTTGGATTATGAACTTTATTGATTTTTCTTTAAAAACTTCTATTATTCAAGCAATCTAGGTGGAAGTTAAGAAGACTATAGCAAAAGATTTACCTACTGGATGGATCGGAGAAATCAGAGAAACGAAGACTGCTAACAGAATAAGAAGAGATTCAGTAATTTATCATCTATTTCTATTTGTTGTGTCCTTTGGAATTTGGATATACTATCTAACCATGCACTCTGTTTCATTTATATATTTAGTGCCTTAAAGCTAGTGACATGCTAAACAACATGAATGTTAACAAATGAACTTCTGTTTGCAGTCTTACATTGATCCAGTAAATGGAAATGCACTTCGTTCAATAAGGGATGTACATCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAACACATAAATCAAGGAACCAGAGAGACAACAACATTGAGTTTCAACATGATGAAATCTCTGTAAGTGTTCTTGAGGTACTCAAAGTTAAAAATGATTAGGGTCTCAAGAGTTTTCATCAGTTGGTTCAACTATCACTTAATGAAATAAGTGTAGTATTTTGGAGTGATGCCCCTCGTCGGTTCTCTCTCTCCAATGTGGGTCCTTGCTATTCACATAATTCAATATTTATGCCCTCATCGATTCTCTCTATGTATCAACGGCTGAAATTTGGGTGAATTCATCTCATCTAAAATATGTACATAAATTTTGGACTTCAATCAGGGATCTCAAATTGATGGAACCCATAAATAATATTCTAGTAACTACTTGGCAATCAAGGACAATTTGAGAGACTGAAATGTCATCAAGATTACACTGAAATGTTAAAACCAATATTGAATTAGGATCGTAAAACATGATAACAGTGGAGAATAGGGTTGGGGGGTTGGTTTGAAAAGGGTGGGAAGGAAATGTAATAGGGATTACACACCGGGCCCAAAGCCCTCATTCCAAATGCAGGTTTGAAATTACAAACCATTACAAACTCATTATATTTCAGCCTCCCAAACAGACCCTAAGTATGGTTGTATTACAATAGCGCAAGGTTTCTTTCTCTCTCGAGAATTAGACTGTAGAGTTGAGATTGGAAACAACTTGGTTACTTGCTTGTCCCTAAACATGGATAGATAAGTAAATAACATCATTTCCTTCTTAATTATTCTGTTTCTTTGACTAGTTGCACTAAACATTCCTGCTTCTGAAGTATTTTAAACCGGAAGTGCAAAAAGAAAACTGTTTCAAACTTAAGTTGATTATTCTTACCTTAGCACTAAATTTCTTATTTCCTTCTCTATTAGTCACCTGTTGTCTCCAAGAAAGAGGTGCTAACTATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAACACATCAGAACCCAGTGAAATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGTAGTGTTCTGAACATGCAGCTTTAGTGTGACATACTTAATTTGACAAACACCCCATTCTTTCCTATCTTCATCACTTATCTCTGTGTAAAGTAGAGGTTTGTTTAGAGTGGAAGGTTCATGCTTTTTAAACAATCTAGCTAAAGATTTCAGTTTCTGTTCTAGAAAAGGGTTTTTTCTTCCTTTCCTTAATTTTTCTGAAAAAATTGAAATGAAAATGTTGAGTGCTTCTGCCAATTGAAGATTATATCTAATGTGAATTTTTAAATTACCGCAGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAATACCAACTTCATAAAATGTACAGTTTTGGTTGGCAGCATAGAAAAGAAAAAAAAAAAGTTTTTCTTCTTGTGTACCTTTCCCTTTTTCATGTTATATTTACTAGTTTTTCATGTTATATTTACTAGTTTTGTTAGTTGTGGTCAGGCAACCCTCTTTTGCCCAAGTTTTGTACCTTATCACATGGGCAACTTAATGTGCTGTATGCTACAAACAGGACTTGATTTTGACTTAGTTCTAACTTACCTTCTGTTAGCTGAC

mRNA sequence

GTAGACGTTACCGGAACCTCTAGCGCTTTCAATCCTCTGCTTTACTTCCAATTACTTAACATACTCCTCCACCTTAACCGTTGGTAACATTTGAATTCACCTCCTTTTTCGGGTCCAAAGAACCAATCCAAGATCCTCAAAGATGGGTTGTACAGAATTTTGAAGGGAAGACTTGTAGAGGATAATCCATGGGGTTCCGACACGTTTATATGACTCGCAGGGTATTTCTCAGAACACGTGGTTTTGAAAGAATATTTTGTCGGAATCCTCCATTTCTAACGTCCTCTTCAAGAGATTTGACTCTAAAATCAGAAACTTGGGTGCCTGAAAGAGAGAAAAATAGAGAGGGTTATTGAGATTGACCGGTGGGTGAACGGAAAGTCTGAGTTTTCCGGGTGAATGATGAACCAAAATTCAAAAGACTTGCTACCACCTGGCTGGACTGTGAAAGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGTCTTACATTGATCCAGTAAATGGAAATGCACTTCGTTCAATAAGGGATGTACATCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAACACATAAATCAAGGAACCAGAGAGACAACAACATTGAGTTTCAACATGATGAAATCTCTTCACCTGTTGTCTCCAAGAAAGAGGTGCTAACTATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAACACATCAGAACCCAGTGAAATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAATACCAACTTCATAAAATGTACAGTTTTGGTTGGCAGCATAGAAAAGAAAAAAAAAAAGTTTTTCTTCTTGTGTACCTTTCCCTTTTTCATGTTATATTTACTAGTTTTTCATGTTATATTTACTAGTTTTGTTAGTTGTGGTCAGGCAACCCTCTTTTGCCCAAGTTTTGTACCTTATCACATGGGCAACTTAATGTGCTGTATGCTACAAACAGGACTTGATTTTGACTTAGTTCTAACTTACCTTCTGTTAGCTGAC

Coding sequence (CDS)

ATGATGAACCAAAATTCAAAAGACTTGCTACCACCTGGCTGGACTGTGAAAGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGTCTTACATTGATCCAGTAAATGGAAATGCACTTCGTTCAATAAGGGATGTACATCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAACACATAAATCAAGGAACCAGAGAGACAACAACATTGAGTTTCAACATGATGAAATCTCTTCACCTGTTGTCTCCAAGAAAGAGGTGCTAACTATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAACACATCAGAACCCAGTGAAATGGTGGATGGTGAAGCTATGTTTCCAAATGCTAGTGTTGGAGAAACCGTGCTGTTTCCAATACCTGACTCAAGCCTTGGAGGGATAAGTGCTAAGCCACATTGCTCAACTCCAACAGATGCAAAAGGTCTCAACCAATCAGATGGAAAGAATGATATTTCTGAAATTGTGTTGACACCTAAAGAATTTATCCAACACAAGTGCCCAATCGAAAATGGAGCAACAAAGGGTGAGAGTAGAAAGAGACAAAGGAAAACTAACGACATAAACTTGCCACGCCGTGCTTCAAAACGACTTGCAGGTCTCCAAGCTGAGCCAGTGCTTCAAGTTAAGACAGGTCGCCGAGCACGTTCAGTTGCATGTGAGGAGTCTGATAAGCAAGTAGCCAGCACAACGAAGTTGGTGGCATTTCAATGTCCTGAGAATCCCGATGTAAAGCATAAAACAAACAGCACAGCTGACCCTTCTAAAATTAACACAAGTCCAGATTCAGGTGGAAAAGCACATATTTGTGTCGACTTGTCCATCGTTATGAAGATGAAATCTGCGGATGCATATGAACAGCAACCAAAACCTGAATCCTCTCTGCCTCCAGAGGACGTTCTGGAAAAGCATGTAGGCATGGTGGAAATTGAAGATAAGGCCAATGTTAAAAAACAAGGCCCTCTTCTTAAACTGCCGATGGAGGACTTATTGACTGATCCTTGCATTGCATTCGCAGTTAAAACACTTACTGGGGACGTTTTGGATGCATCCATAAGCTCAGATGCATCACTCACGCCAAACCATGTTGATCCTTTCACTCCCTTTACTCCAAATGAGAGGTGTAACTCAGGACCAGAAAACAAGCTTAATGAGAAAGTGGCATGTCCAGAACTTCCTGTTGCTCGAGTTGGGAAAGTCGAAAATAATGTTGAGAAGCTAAAATCAACTCTGGAGTTGCCAGTTGGTGAAATATTTTCAGACCCTTGTATAGAATTTGCCATTAAAACTCTAACCGGTGAAATCCCACTCGACAACAATCGGGATATTGAGGATTACTTTTACCAATTTAGCACGTCAAAAACAGAAAAAACTAATGAAAATGCCTCAGATCAGCCTGGTTTGGATTATTTCTGCAAGACTAATGTTAGCCAGAAGCAGCAGGCTATCCAAGCACTGGGTGCATCTCCTAAGATTAACTTCCAAACCTGTGGAACAGGTTTGCACCACCAAGAAAGGAACAGAAACGAGTTCCAAAGGCACTAA

Protein sequence

MMNQNSKDLLPPGWTVKVKVRKSGKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH*

Homology

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BLAST of CsGy3G016920 vs. ExPASy Swiss-Prot
Match: Q9LTJ8 (Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=MBD13 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.5e-11
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 335 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 394
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 395 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 454
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 455 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 487
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

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BLAST of CsGy3G016920 vs. NCBI nr
Match: XP_004140849.1 (methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus])

HSP 1 Score: 1037 bits (2681), Expect = 0.0
Identity = 520/522 (99.62%), Postives = 520/522 (99.62%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHK 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHK
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHK 60

Query: 61  SRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASV 120
           SRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASV
Sbjct: 61  SRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASV 120

Query: 121 GETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPIENG 180
           GETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTPKEFIQHKCPIENG
Sbjct: 121 GETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTPKEFIQHKCPIENG 180

Query: 181 ATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTK 240
           ATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTK
Sbjct: 181 ATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTK 240

Query: 241 LVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPE 300
           LVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPE
Sbjct: 241 LVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPE 300

Query: 301 SSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASI 360
           SSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASI
Sbjct: 301 SSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASI 360

Query: 361 SSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLE 420
           SSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLE
Sbjct: 361 SSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLE 420

Query: 421 LPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFC 480
           LPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFC
Sbjct: 421 LPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFC 480

Query: 481 KTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 522
           KTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 481 KTNVSQKQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 522

[Close]

BLAST of CsGy3G016920 vs. NCBI nr
Match: XP_011651145.1 (methyl-CpG-binding domain-containing protein 13 isoform X3 [Cucumis sativus])

HSP 1 Score: 1020 bits (2638), Expect = 0.0
Identity = 520/554 (93.86%), Postives = 520/554 (93.86%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKVEVKKTIAKDLPTGWIGEIRETKTANRIRRDS 60

Query: 61  SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT 120
           SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT
Sbjct: 61  SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLT 120

Query: 121 IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDA 180
           IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDA
Sbjct: 121 IGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDA 180

Query: 181 KGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG 240
           KGL QSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG
Sbjct: 181 KGLKQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAG 240

Query: 241 LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS 300
           LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS
Sbjct: 241 LQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTS 300

Query: 301 PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG 360
           PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG
Sbjct: 301 PDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQG 360

Query: 361 PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE 420
           PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE
Sbjct: 361 PLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPE 420

Query: 421 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 480
           NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN
Sbjct: 421 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 480

Query: 481 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 522
           RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG
Sbjct: 481 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQKQQAIQALGASPKINFQTCGTG 540

[Close]

BLAST of CsGy3G016920 vs. NCBI nr
Match: XP_011651143.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus] >KGN57399.2 hypothetical protein Csa_010431 [Cucumis sativus])

HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 520/597 (87.10%), Postives = 520/597 (87.10%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  -------------------------------------------SYIDPVNGNALRSIRDV 120
                                                      SYIDPVNGNALRSIRDV
Sbjct: 61  ESRTVKEPGNNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180
           HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP
Sbjct: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180

Query: 181 SEMVDGEAMFPNASVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVL 240
           SEMVDGEAMFPNASVGETVLFPIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVL
Sbjct: 181 SEMVDGEAMFPNASVGETVLFPIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVL 240

Query: 241 TPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARS 300
           TPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARS
Sbjct: 241 TPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARS 300

Query: 301 VACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVM 360
           VACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVM
Sbjct: 301 VACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVM 360

Query: 361 KMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIA 420
           KMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIA
Sbjct: 361 KMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIA 420

Query: 421 FAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARV 480
           FAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARV
Sbjct: 421 FAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARV 480

Query: 481 GKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEK 522
           GKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEK
Sbjct: 481 GKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEK 540

[Close]

BLAST of CsGy3G016920 vs. NCBI nr
Match: XP_011651144.1 (methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 991 bits (2561), Expect = 0.0
Identity = 498/516 (96.51%), Postives = 504/516 (97.67%), Query Frame = 0


Query: 10  LPPGWTVKVKVRKSG---KKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRD 69
           LP GW  +++  K+    ++D SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRD
Sbjct: 46  LPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRD 105

Query: 70  NNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLF 129
           NNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLF
Sbjct: 106 NNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLF 165

Query: 130 PIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGES 189
           PIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTPKEFIQHKCPIENGATKGES
Sbjct: 166 PIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTPKEFIQHKCPIENGATKGES 225

Query: 190 RKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQC 249
           RKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQC
Sbjct: 226 RKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQC 285

Query: 250 PENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPE 309
           PENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPE
Sbjct: 286 PENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPE 345

Query: 310 DVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASL 369
           DVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASL
Sbjct: 346 DVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASL 405

Query: 370 TPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEI 429
           TPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEI
Sbjct: 406 TPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEI 465

Query: 430 FSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 489
           FSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ
Sbjct: 466 FSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 525

Query: 490 KQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 522
           KQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 526 KQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 561

[Close]

BLAST of CsGy3G016920 vs. NCBI nr
Match: TYK22932.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 876 bits (2263), Expect = 0.0
Identity = 469/603 (77.78%), Postives = 488/603 (80.93%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  -------------------------------------------SYIDPVNGNALRSIRDV 120
                                                      SYIDP+NG+ALRSIRDV
Sbjct: 61  ESRTIKEPGNNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPINGHALRSIRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180
           HRYLTSGKVSRL HKSRNQRD+ I+ QHDEISSPVVSKKEVLTIGKARRQIIWSEN+SEP
Sbjct: 121 HRYLTSGKVSRLAHKSRNQRDSTIDLQHDEISSPVVSKKEVLTIGKARRQIIWSENSSEP 180

Query: 181 SEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIV 240
           SE+VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV
Sbjct: 181 SEIVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIV 240

Query: 241 LTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRAR 300
            T  +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRAR
Sbjct: 241 STTDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRAR 300

Query: 301 SVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI- 360
           SVACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI 
Sbjct: 301 SVACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSIL 360

Query: 361 ---VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLT 420
              VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLT
Sbjct: 361 PKNVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLT 420

Query: 421 DPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPEL 480
           DPCIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PEL
Sbjct: 421 DPCIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPEL 480

Query: 481 PVARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFS 522
           PV RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFS
Sbjct: 481 PVTRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFS 540

[Close]

BLAST of CsGy3G016920 vs. ExPASy TrEMBL
Match: A0A0A0L6H4 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV=1)

HSP 1 Score: 991 bits (2561), Expect = 0.0
Identity = 498/516 (96.51%), Postives = 504/516 (97.67%), Query Frame = 0


Query: 10  LPPGWTVKVKVRKSG---KKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRD 69
           LP GW  +++  K+    ++D SYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRD
Sbjct: 46  LPTGWIGEIRETKTANRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRD 105

Query: 70  NNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLF 129
           NNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLF
Sbjct: 106 NNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNASVGETVLF 165

Query: 130 PIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPIENGATKGES 189
           PIPD SLGGISAKPHCSTPTDAKGL QSDGKNDISEIVLTPKEFIQHKCPIENGATKGES
Sbjct: 166 PIPDPSLGGISAKPHCSTPTDAKGLKQSDGKNDISEIVLTPKEFIQHKCPIENGATKGES 225

Query: 190 RKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQC 249
           RKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQC
Sbjct: 226 RKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQC 285

Query: 250 PENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPE 309
           PENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPE
Sbjct: 286 PENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPE 345

Query: 310 DVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASL 369
           DVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASL
Sbjct: 346 DVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASL 405

Query: 370 TPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEI 429
           TPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEI
Sbjct: 406 TPNHVDPFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEI 465

Query: 430 FSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 489
           FSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ
Sbjct: 466 FSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 525

Query: 490 KQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 522
           KQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH
Sbjct: 526 KQQAIQALGASPKINFQTCGTGLHHQERNRNEFQRH 561

[Close]

BLAST of CsGy3G016920 vs. ExPASy TrEMBL
Match: A0A5D3DH45 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00100 PE=4 SV=1)

HSP 1 Score: 876 bits (2263), Expect = 0.0
Identity = 469/603 (77.78%), Postives = 488/603 (80.93%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  -------------------------------------------SYIDPVNGNALRSIRDV 120
                                                      SYIDP+NG+ALRSIRDV
Sbjct: 61  ESRTIKEPGNNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPINGHALRSIRDV 120

Query: 121 HRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEP 180
           HRYLTSGKVSRL HKSRNQRD+ I+ QHDEISSPVVSKKEVLTIGKARRQIIWSEN+SEP
Sbjct: 121 HRYLTSGKVSRLAHKSRNQRDSTIDLQHDEISSPVVSKKEVLTIGKARRQIIWSENSSEP 180

Query: 181 SEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIV 240
           SE+VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL QSDGKNDISEIV
Sbjct: 181 SEIVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQSDGKNDISEIV 240

Query: 241 LTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRAR 300
            T  +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEPVL+VKTGRRAR
Sbjct: 241 STTDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEPVLEVKTGRRAR 300

Query: 301 SVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI- 360
           SVACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG K H+CVDLSI 
Sbjct: 301 SVACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGEKEHLCVDLSIL 360

Query: 361 ---VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLT 420
              VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGPLLKLPMEDLLT
Sbjct: 361 PKNVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGPLLKLPMEDLLT 420

Query: 421 DPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPENKLNEKVACPEL 480
           DPCIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPENKLNEKVA PEL
Sbjct: 421 DPCIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPENKLNEKVARPEL 480

Query: 481 PVARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFS 522
           PV RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N DIEDYF+QFS
Sbjct: 481 PVTRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDNPDIEDYFHQFS 540

[Close]

BLAST of CsGy3G016920 vs. ExPASy TrEMBL
Match: A0A5A7ST33 (Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00730 PE=4 SV=1)

HSP 1 Score: 872 bits (2252), Expect = 3.63e-315
Identity = 469/614 (76.38%), Postives = 488/614 (79.48%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDK-------------------------------- 60
           MMNQNSKDLLPPGWTVKVKVRKSGKKDK                                
Sbjct: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKYYFEPSSQMRFNSRAEVFRYLKTAAICHPESE 60

Query: 61  ------------------------------------------------------SYIDPV 120
                                                                 SYIDP+
Sbjct: 61  ESRTIKEPGNNVCQKNLPSTYNVEVKKTIAKDLPTGWIGEIRETKTANRIRRDSSYIDPI 120

Query: 121 NGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVVSKKEVLTIGKARR 180
           NG+ALRSIRDVHRYLTSGKVSRL HKSRNQRD+ I+ QHDEISSPVVSKKEVLTIGKARR
Sbjct: 121 NGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDSTIDLQHDEISSPVVSKKEVLTIGKARR 180

Query: 181 QIIWSENTSEPSEMVDGEAMFPNA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQ 240
           QIIWSEN+SEPSE+VD EAMFP+A SVGE V F  PD+SL GISAK HCS PTDAKGL Q
Sbjct: 181 QIIWSENSSEPSEIVDDEAMFPSATSVGEIVPFQKPDASLEGISAKAHCSIPTDAKGLKQ 240

Query: 241 SDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEP 300
           SDGKNDISEIV T  +FIQHKCPIENGATK ESRKRQRK NDINLPRRASKRLAGLQAEP
Sbjct: 241 SDGKNDISEIVSTTDKFIQHKCPIENGATKSESRKRQRKINDINLPRRASKRLAGLQAEP 300

Query: 301 VLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGG 360
           VL+VKTGRRARSVACEESDKQVASTTKL A +CPE+PDVKHKTNST DP KINTSP SG 
Sbjct: 301 VLEVKTGRRARSVACEESDKQVASTTKLAASRCPEDPDVKHKTNSTVDPPKINTSPASGE 360

Query: 361 KAHICVDLSI----VMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGP 420
           K H+CVDLSI    VMKMKS DAYEQQPKPESSLPPEDVLEKHVG VEIEDKA++KKQGP
Sbjct: 361 KEHLCVDLSILPKNVMKMKSEDAYEQQPKPESSLPPEDVLEKHVGTVEIEDKADIKKQGP 420

Query: 421 LLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTPNERCNSGPEN 480
           LLKLPMEDLLTDPCIAFAVKTLTG VLDASISS ASLTPN+VDPFT FTPNER NSGPEN
Sbjct: 421 LLKLPMEDLLTDPCIAFAVKTLTGGVLDASISSAASLTPNYVDPFTSFTPNERRNSGPEN 480

Query: 481 KLNEKVACPELPVARVGKVENNV-EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 522
           KLNEKVA PELPV RVGKVENNV EKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLD+N
Sbjct: 481 KLNEKVARPELPVTRVGKVENNVVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDDN 540

[Close]

BLAST of CsGy3G016920 vs. ExPASy TrEMBL
Match: A0A6J1J920 (methyl-CpG-binding domain-containing protein 13-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482847 PE=4 SV=1)

HSP 1 Score: 637 bits (1642), Expect = 2.37e-224
Identity = 354/489 (72.39%), Postives = 395/489 (80.78%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHK 60
           MMNQNS++ LP GWTVKVKVRKSGKKDK YI+PVNGNALRS+RDVHRYLTSGKVSRL +K
Sbjct: 1   MMNQNSENWLPLGWTVKVKVRKSGKKDKFYINPVNGNALRSLRDVHRYLTSGKVSRLAYK 60

Query: 61  SRNQRDNN--IEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNA 120
           SR+Q ++N  IEFQHD+ISS  VSKKE+L IGKA+RQIIWS+N+ EPSE+ D EA+FP A
Sbjct: 61  SRSQSNSNSNIEFQHDDISSSSVSKKEMLAIGKAKRQIIWSDNSPEPSEIADDEAIFPKA 120

Query: 121 -SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKCPI 180
            SVGE + F  P+ + G I AK  CSTP +AK   QS+GKN  SE V TP + I+HKC  
Sbjct: 121 ASVGERMPFLKPNLTHGRIGAKLRCSTPEEAKEREQSEGKNSFSEFVSTPDKSIRHKCTS 180

Query: 181 ENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVAS 240
           ENGATK ESRKRQRK+ DINLP RASKRLAGLQAEPVL+ KT RRA SVACEESDKQVAS
Sbjct: 181 ENGATKIESRKRQRKSKDINLPCRASKRLAGLQAEPVLEAKTDRRACSVACEESDKQVAS 240

Query: 241 TTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI----VMKMKSADAY 300
           TTK  + QCPENPDVKH+T S  DP KI+T+ DS  K H  VDLSI    V KMKS DAY
Sbjct: 241 TTKWPS-QCPENPDVKHETRSIIDPPKIDTNLDSSRKEHSAVDLSILPEKVKKMKSEDAY 300

Query: 301 EQQ-PKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLT 360
           EQQ PK  S LP EDVLEKHVG VE ED+A VKKQGPLLKLPMEDLLTDPCIAFAVKTLT
Sbjct: 301 EQQQPKCNSFLPSEDVLEKHVGQVESEDEAGVKKQGPLLKLPMEDLLTDPCIAFAVKTLT 360

Query: 361 GDVLDASISSDAS---LTPNHVD-PFTPFTPNERCNSGPENKLNEKVACPELPVARVGKV 420
           GDV DASISS+AS   L PN++D PF  FTP+ER N G ENKLNEK   PELPV RVGKV
Sbjct: 361 GDVFDASISSEASEASLMPNNIDRPFVAFTPSERRNLGSENKLNEKSPSPELPVTRVGKV 420

Query: 421 ENN--VEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKT 475
           ENN  VEKL+STLELPVGE+++DPCIEFAIKTLTGEIPL NN DIEDYF+QF+ SKT+ T
Sbjct: 421 ENNNIVEKLESTLELPVGEMWADPCIEFAIKTLTGEIPLVNNPDIEDYFHQFAPSKTKGT 480

[Close]

BLAST of CsGy3G016920 vs. ExPASy TrEMBL
Match: A0A6J1E8R5 (methyl-CpG-binding domain-containing protein 13-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111430888 PE=4 SV=1)

HSP 1 Score: 625 bits (1613), Expect = 4.85e-220
Identity = 348/488 (71.31%), Postives = 392/488 (80.33%), Query Frame = 0


Query: 1   MMNQNSKDLLPPGWTVKVKVRKSGKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHK 60
           MMNQNS++ LPPGWTVKVKVRKSGKKDK YI+PVNGNALRS+RDVHRYLTSGKVSRL +K
Sbjct: 1   MMNQNSENWLPPGWTVKVKVRKSGKKDKFYINPVNGNALRSLRDVHRYLTSGKVSRLAYK 60

Query: 61  SRNQRDNN----IEFQHDEISSPVVSKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFP 120
           SR+Q ++N    IEFQHD+ISSP VS+KE+L IGKA+RQIIWS+N+ EPSE+VD EA+FP
Sbjct: 61  SRSQSNSNSNSNIEFQHDDISSPSVSEKEMLAIGKAKRQIIWSDNSPEPSEIVDDEAIFP 120

Query: 121 NA-SVGETVLFPIPDSSLGGISAKPHCSTPTDAKGLNQSDGKNDISEIVLTPKEFIQHKC 180
            A SVGE + F  P+ + G I AK HCSTP +AK   QS+GKN+ S+ V TP +  QHKC
Sbjct: 121 KAASVGERMPFLKPNLTHGRIGAKLHCSTPEEAKEREQSEGKNNFSDFVPTPDKSFQHKC 180

Query: 181 PIENGATKGESRKRQRKTNDINLPRRASKRLAGLQAEPVLQVKTGRRARSVACEESDKQV 240
             ENGATK ESRKRQRK+ DINL  RASKRLAGLQAEPVL+ KTG +A S+ACEESDKQV
Sbjct: 181 TSENGATKIESRKRQRKSKDINLRCRASKRLAGLQAEPVLEAKTGHQACSIACEESDKQV 240

Query: 241 ASTTKLVAFQCPENPDVKHKTNSTADPSKINTSPDSGGKAHICVDLSI----VMKMKSAD 300
           ASTTK  + Q PENPDVKH+T S  DP KI+T+ DS  K H  VDLSI    V KMKS D
Sbjct: 241 ASTTKWPS-QSPENPDVKHETKSIIDPPKIDTNLDSSRKEHSAVDLSILPEKVKKMKSED 300

Query: 301 AYE-QQPKPESSLPPEDVLEKHVGMVEIEDKANVKKQGPLLKLPMEDLLTDPCIAFAVKT 360
           AYE QQPK  S LP EDVLEKHVG VE +DKA+VKKQG LLKLPMEDLLTDPCIAFAVKT
Sbjct: 301 AYELQQPKCNSFLPSEDVLEKHVGQVESDDKADVKKQGTLLKLPMEDLLTDPCIAFAVKT 360

Query: 361 LTGDVLDASISSDASLTPNHVD-PFTPFTPNERCNSGPENKLNEKVACPELPVARVGKVE 420
           LTGDV DASISS+ASL PN++D PF  FT  E      ENKLNEK+  PELPV RVGKVE
Sbjct: 361 LTGDVFDASISSEASLMPNNIDRPFVAFTHLES-----ENKLNEKLPSPELPVTRVGKVE 420

Query: 421 NN--VEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNNRDIEDYFYQFSTSKTEKTN 475
           NN  VEKL STL+LPVGEI++DPCIEFAIKTLTGEIPL NN DIEDYF+QF+ SKTE TN
Sbjct: 421 NNNIVEKLDSTLKLPVGEIWADPCIEFAIKTLTGEIPLVNNPDIEDYFHQFAPSKTEGTN 480

[Close]

BLAST of CsGy3G016920 vs. TAIR 10
Match: AT5G52230.1 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-12
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 335 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 394
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 395 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 454
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 455 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 487
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

[Close]

BLAST of CsGy3G016920 vs. TAIR 10
Match: AT5G52230.2 (methyl-CPG-binding domain protein 13 )

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-12
Identity = 56/158 (35.44%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 335 MEDLLTDPCIAFAVKTLTGDVLDASISSDASLTP--NHVD----PFTPFTPNERCNSGPE 394
           + DL  DPCIAFA+KTLTG+ L    +   S  P  NH       FTP TP      G  
Sbjct: 602 LADLCKDPCIAFAIKTLTGESLCLLNTPAISSNPINNHTKQKGVSFTPETP------GNV 661

Query: 395 NKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTLTGEIPLDNN 454
           N  +EK+  P  P                    P   I+ DPCI+FAIKTLTG IP+  +
Sbjct: 662 NTCSEKLVFPSPP--------------------PGANIWQDPCIDFAIKTLTGAIPIGLD 721

Query: 455 RDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNVSQ 487
                   Q  TS T  T E    Q   DY     V +
Sbjct: 722 EPDTKSKSQGMTSTTAATQEAKGRQNNCDYMTNKTVGK 733

[Close]

BLAST of CsGy3G016920 vs. TAIR 10
Match: AT5G59800.1 (methyl-CPG-binding domain 7 )

HSP 1 Score: 46.2 bits (108), Expect = 9.3e-05
Identity = 38/95 (40.00%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 5   NSKDL-LPPGWTVKVKVRKSGKK-DKSYIDPVNGNALRSIRDVHRYLTS-GKVS----RL 64
           +SKD  LP GW V+ K R+S    D+SYI+P  GN  RS+  V RYL S G ++     +
Sbjct: 176 HSKDFRLPDGWIVEEKPRRSSSHIDRSYIEPGTGNKFRSMAAVERYLISVGNITLDSVSM 235

Query: 65  THKSR---NQRDNNIEFQHDEIS-SPVVSKKEVLT 89
            H  R       N I FQ + I  +P    K VLT
Sbjct: 236 VHSERLPLLMNRNGIRFQSEVIDPNPPKKVKWVLT 270

[Close]

BLAST of CsGy3G016920 vs. TAIR 10
Match: AT5G59380.1 (methyl-CPG-binding domain 6 )

HSP 1 Score: 43.9 bits (102), Expect = 4.6e-04
Identity = 27/67 (40.30%), Postives = 33/67 (49.25%), Query Frame = 0


Query: 10  LPPGWTVKVKVRKS----GKKDKSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQR 69
           LPPGW V+ K+R S    G  DK Y +P  G   RS  +V  YL  G   R T K+ N  
Sbjct: 81  LPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKKAENTY 140

Query: 70  DNNIEFQ 73
            N   F+
Sbjct: 141 FNPDHFE 147

The following BLAST results are available for this feature:

BLAST of CsGy3G016920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTJ8	8.5e-11	35.44	Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsGy3G016920 vs. NCBI nr


Match Name	Identity	Description
XP_004140849.1	99.62	methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus]	[more]
XP_011651145.1	93.86	methyl-CpG-binding domain-containing protein 13 isoform X3 [Cucumis sativus]	[more]
XP_011651143.1	87.10	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus] >KG...	[more]
XP_011651144.1	96.51	methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus]	[more]
TYK22932.1	77.78	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. ma...	[more]

BLAST of CsGy3G016920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6H4	0.0	96.51	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV...	[more]
A0A5D3DH45	0.0	77.78	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A5A7ST33	3.63e-315	76.38	Methyl-CpG-binding domain-containing protein 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A6J1J920	2.37e-224	72.39	methyl-CpG-binding domain-containing protein 13-like isoform X4 OS=Cucurbita max...	[more]
A0A6J1E8R5	4.85e-220	71.31	methyl-CpG-binding domain-containing protein 13-like isoform X4 OS=Cucurbita mos...	[more]

BLAST of CsGy3G016920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52230.1	6.0e-12	35.44	methyl-CPG-binding domain protein 13	[more]
AT5G52230.2	6.0e-12	35.44	methyl-CPG-binding domain protein 13	[more]
AT5G59800.1	9.3e-05	40.00	methyl-CPG-binding domain 7	[more]
AT5G59380.1	4.6e-04	40.30	methyl-CPG-binding domain 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.890.10		coord: 2..95 e-value: 9.8E-14 score: 53.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..199
None	No IPR available	PANTHER	PTHR34067:SF15	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13	coord: 5..516
None	No IPR available	CDD	cd00122	MBD	coord: 7..58 e-value: 3.28927E-11 score: 56.9489
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 9..53 e-value: 1.3E-8 score: 34.4
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 1..76 score: 13.738594
IPR038945	Methyl-CpG-binding domain-containing protein 13-like	PANTHER	PTHR34067	OS04G0193200 PROTEIN	coord: 5..516
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 9..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G016920.2	CsGy3G016920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding