CsGy3G015985 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G015985
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 11868286 .. 11868792 (-)
RNA-Seq ExpressionCsGy3G015985
SyntenyCsGy3G015985
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATTCCATTTCTCCAAAAGACTACTCGCCGATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAACTAACTCTCTTGATTCTCTCTTATTTTTCCTCTTTGTGGATCGAATCAAATGATTCCTGATCCTTTTCTTGTGCTTCCCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATATTTTGTAATTAGAAATTAATTAGAAATTTTGATTCCTGTATATACTTGAATTGCTTAGAAAGCTTCAGAATGTATATAAAATATCTTCTTGTTATTATTGTTGC

mRNA sequence

TCCATTCCATTTCTCCAAAAGACTACTCGCCGATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAACTAACTCTCTTGATTCTCTCTTATTTTTCCTCTTTGTGGATCGAATCAAATGATTCCTGATCCTTTTCTTGTGCTTCCCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATATTTTGTAATTAGAAATTAATTAGAAATTTTGATTCCTGTATATACTTGAATTGCTTAGAAAGCTTCAGAATGTATATAAAATATCTTCTTGTTATTATTGTTGC

Coding sequence (CDS)

ATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAA

Protein sequence

MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFKF*
Homology
BLAST of CsGy3G015985 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus])

HSP 1 Score: 174 bits (441), Expect = 6.81e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFLKIVWCFKF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 3.67e-50
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGG GESERGGD+FFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGGGESERGGDVFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFL+IV  FKF
Sbjct: 61 SRRKLEPFNCFEFLRIVCSFKF 82

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122 bits (306), Expect = 3.31e-34
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGES-------ERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESA 60
          MARD LP+EFG GG G+S       +  GDIFFGKDDMK Y WD V+TEETVRF+ETESA
Sbjct: 1  MARDTLPYEFGVGGGGKSCSSPSKYDVVGDIFFGKDDMKGYVWDEVFTEETVRFLETESA 60

Query: 61 KKALRKRSRRKLEPFNCFEFLKIVWCFKF 82
           + LRKRS+R+LE F CFEFLK +WCF F
Sbjct: 61 VEVLRKRSKRRLETFKCFEFLKFLWCFNF 89

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.9 bits (180), Expect = 2.60e-13
Identity = 43/97 (44.33%), Postives = 53/97 (54.64%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGESERG------------GDIFFGKDDMKEYAWDGVYTEETVRFI 60
          MA D  PFEFGG G G    G            GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60

Query: 61 ETESAKKALRKRSRRKLEPFN-------CFEFLKIVW 78
          ET   ++      +R  EP +       C +F + ++
Sbjct: 61 ET--VRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIY 95

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 2.75e-13
Identity = 41/81 (50.62%), Postives = 47/81 (58.02%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGESERG------------GDIFFGKDDMKEYAWDGVYTEETVRFI 60
          MA D  PFEFGG G G    G            GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60

Query: 61 ETESAKKALRKRSRRKLEPFN 69
          ET   ++      +R  EP +
Sbjct: 61 ET--VRRFSTVNVKRSSEPLS 79

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 3.30e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFLKIVWCFKF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.78e-50
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0

Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGG GESERGGD+FFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGGGESERGGDVFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFL+IV  FKF
Sbjct: 61 SRRKLEPFNCFEFLRIVCSFKF 82

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A0D2PLY0 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G048900 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.37e-05
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0

Query: 22  GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSR-RKLEPFNCFEFLKIV 77
           GD+FFG DD+++   D +Y E+ +   + E+A+K LR+RS+ R +  F C EFLK++
Sbjct: 55  GDVFFGTDDIRDTR-DLLYKEDVLESYQKETAQKYLRQRSKKRSISNFGCVEFLKLL 110

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A5J5QM51 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D07G048300v1 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.37e-05
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0

Query: 22  GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSR-RKLEPFNCFEFLKIV 77
           GD+FFG DD+++   D +Y E+ +   + E+A+K LR+RS+ R +  F C EFLK++
Sbjct: 55  GDVFFGTDDIRDTR-DLLYKEDVLESYQKETAQKYLRQRSKKRSISNFGCVEFLKLL 110

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A7J7DBE1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.61e-05
Identity = 21/60 (35.00%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 22  GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFK 81
           GD+FFG DD+ +   D +Y E+ +     + A K +++R +R      CFEFLK++ C +
Sbjct: 46  GDVFFGTDDLADTR-DFLYKEDVIESYRRDRALKLVKRRDKRSSSIAECFEFLKLILCIR 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN57263.16.81e-55100.00hypothetical protein Csa_009618 [Cucumis sativus][more]
KAA0067665.13.67e-5093.90hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669... [more]
KAG6576802.13.31e-3466.29hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7030840.12.60e-1344.33hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600176.12.75e-1350.62hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0L6583.30e-55100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1[more]
A0A5D3DK721.78e-5093.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0D2PLY04.37e-0542.11Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G048900 PE=4 ... [more]
A0A5J5QM514.37e-0542.11Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D07G048300v1 PE... [more]
A0A7J7DBE14.61e-0535.00Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G015985.1CsGy3G015985.1mRNA