CsGy3G015985 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G015985
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 11868286 .. 11868792 (-)
RNA-Seq Expression	CsGy3G015985
Synteny	CsGy3G015985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATTCCATTTCTCCAAAAGACTACTCGCCGATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAACTAACTCTCTTGATTCTCTCTTATTTTTCCTCTTTGTGGATCGAATCAAATGATTCCTGATCCTTTTCTTGTGCTTCCCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATATTTTGTAATTAGAAATTAATTAGAAATTTTGATTCCTGTATATACTTGAATTGCTTAGAAAGCTTCAGAATGTATATAAAATATCTTCTTGTTATTATTGTTGC

mRNA sequence

TCCATTCCATTTCTCCAAAAGACTACTCGCCGATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAACTAACTCTCTTGATTCTCTCTTATTTTTCCTCTTTGTGGATCGAATCAAATGATTCCTGATCCTTTTCTTGTGCTTCCCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATATTTTGTAATTAGAAATTAATTAGAAATTTTGATTCCTGTATATACTTGAATTGCTTAGAAAGCTTCAGAATGTATATAAAATATCTTCTTGTTATTATTGTTGC

Coding sequence (CDS)

ATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAA

Protein sequence

MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFKF*

Homology

[Close]

BLAST of CsGy3G015985 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus])

HSP 1 Score: 174 bits (441), Expect = 6.81e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFLKIVWCFKF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

[Close]

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 3.67e-50
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGG GESERGGD+FFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGGGESERGGDVFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFL+IV  FKF
Sbjct: 61 SRRKLEPFNCFEFLRIVCSFKF 82

[Close]

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122 bits (306), Expect = 3.31e-34
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGES-------ERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESA 60
          MARD LP+EFG GG G+S       +  GDIFFGKDDMK Y WD V+TEETVRF+ETESA
Sbjct: 1  MARDTLPYEFGVGGGGKSCSSPSKYDVVGDIFFGKDDMKGYVWDEVFTEETVRFLETESA 60

Query: 61 KKALRKRSRRKLEPFNCFEFLKIVWCFKF 82
           + LRKRS+R+LE F CFEFLK +WCF F
Sbjct: 61 VEVLRKRSKRRLETFKCFEFLKFLWCFNF 89

[Close]

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.9 bits (180), Expect = 2.60e-13
Identity = 43/97 (44.33%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGESERG------------GDIFFGKDDMKEYAWDGVYTEETVRFI 60
          MA D  PFEFGG G G    G            GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60

Query: 61 ETESAKKALRKRSRRKLEPFN-------CFEFLKIVW 78
          ET   ++      +R  EP +       C +F + ++
Sbjct: 61 ET--VRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIY 95

[Close]

BLAST of CsGy3G015985 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 2.75e-13
Identity = 41/81 (50.62%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGESERG------------GDIFFGKDDMKEYAWDGVYTEETVRFI 60
          MA D  PFEFGG G G    G            GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60

Query: 61 ETESAKKALRKRSRRKLEPFN 69
          ET   ++      +R  EP +
Sbjct: 61 ET--VRRFSTVNVKRSSEPLS 79

[Close]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 3.30e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFLKIVWCFKF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

[Close]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.78e-50
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGG GESERGGD+FFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGGGESERGGDVFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 82
          SRRKLEPFNCFEFL+IV  FKF
Sbjct: 61 SRRKLEPFNCFEFLRIVCSFKF 82

[Close]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A0D2PLY0 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G048900 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.37e-05
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 22  GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSR-RKLEPFNCFEFLKIV 77
           GD+FFG DD+++   D +Y E+ +   + E+A+K LR+RS+ R +  F C EFLK++
Sbjct: 55  GDVFFGTDDIRDTR-DLLYKEDVLESYQKETAQKYLRQRSKKRSISNFGCVEFLKLL 110

[Close]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A5J5QM51 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D07G048300v1 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.37e-05
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 22  GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSR-RKLEPFNCFEFLKIV 77
           GD+FFG DD+++   D +Y E+ +   + E+A+K LR+RS+ R +  F C EFLK++
Sbjct: 55  GDVFFGTDDIRDTR-DLLYKEDVLESYQKETAQKYLRQRSKKRSISNFGCVEFLKLL 110

[Close]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL
Match: A0A7J7DBE1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.61e-05
Identity = 21/60 (35.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 22  GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFK 81
           GD+FFG DD+ +   D +Y E+ +     + A K +++R +R      CFEFLK++ C +
Sbjct: 46  GDVFFGTDDLADTR-DFLYKEDVIESYRRDRALKLVKRRDKRSSSIAECFEFLKLILCIR 104

The following BLAST results are available for this feature:

BLAST of CsGy3G015985 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G015985 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57263.1	6.81e-55	100.00	hypothetical protein Csa_009618 [Cucumis sativus]	[more]
KAA0067665.1	3.67e-50	93.90	hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669...	[more]
KAG6576802.1	3.31e-34	66.29	hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030840.1	2.60e-13	44.33	hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600176.1	2.75e-13	50.62	hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L658	3.30e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1	[more]
A0A5D3DK72	1.78e-50	93.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0D2PLY0	4.37e-05	42.11	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G048900 PE=4 ...	[more]
A0A5J5QM51	4.37e-05	42.11	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D07G048300v1 PE...	[more]
A0A7J7DBE1	4.61e-05	35.00	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 ...	[more]

BLAST of CsGy3G015985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G015985.1	CsGy3G015985.1	mRNA