CsGy3G015740 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G015740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	U11/U12 small nuclear ribonucleoprotein 35 kDa protein
Location	Gy14Chr3: 11611806 .. 11617141 (-)
RNA-Seq Expression	CsGy3G015740
Synteny	CsGy3G015740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATAATTTCCTCTTTACCTATAAATTTGCTCTTTCTTTTATATTTGGGTGATGAGCAACTTTCATTTATGGAGGGAGACGAGAAGTAGGCTTTGTGCGGCAATGAGTGGGAGCAACGTAAACAAGGTCTTTTACGCCGATAACTACCATCCCATTCAGGCCGGCAGCATCGACGGCACCGACATTCTTTCCCACGACAACGCCGTCTACCGAGCTTTACTCTGTTCTTCTGCTGGCCTCTGTAATTCTCTCCCCTCTAATTTTTCAACTCCCACTTTGTATTTGCTGATGTTTTTCGCCGTCTTTTTTATTCTAATCTACTGGTGTGATCTTTTCTGGCAGATGACCCCCATGGCGATCCCAAGGTCTTCGGTGACCCTTATTGCACCCTCTTCGTTGGTCGCCTTTCACATCTCACTACTGAAGACACTCTTCGCAGGGTATTTTCTATTCATTAATCAGTTTTTCTTGTGGTTTATTGATTTCTGATGAGAATTGAGATGAATTAATACTACTTCGGAACTTGGGTGTTGGTTTATTTGGCTGGATGTGAGAATTTTGTGGTTGGTGTTAATGGCTATTATGTGTTGATTGCTTTTACTGCTATACTGTTTTACTTTGTCTCAGATGATCTGTATATTAGGCCCTAGGAAGATGGACACTAAGAGAGAGTGGATTATCAGTTATATAGTTCAACTGGCACCTCGATTTGTTGGAGGTGCAGCTAAAACTATAATTAAAACTAGAAGAGAGAGCTTTAGTTTTTTGTTTTTTGGATGCAACCGTTGAAGGAACTTTACGACTGGATTTTCGTAGGGTCATGATTGCTGCAATGTAGAACGATTGCTAATAATATTTTGCCCGAAGAAAAGGGTTATCGACTTATGCCTGTGATCATTGAAACCTTCGGTGGGCCAGGAACAGAATGGCTTGGAGAAGTGGGTCTTCTGGTTAGATCCAAGGGGACATCTCTCCACGTTTCTAATCAGCTCTTGCATGCATGCTTGTGTGCTAGACTTATGCCCGTGACCCGTGTCTTGAATGTCACAAAGGATAGGGCTCAACCACAGGTGGTCTTGGAATGTCTTTGATCACCTAACTCAGTCATAAAGTCGGGGTGGAGATAGGTCTGAAAGAGGAAATGACATTTCCAAAATCTGCTTTGAATAGGTTATCGATTGCCGCATTTCGTAGGCATATTGATGGTGAGGGTCAACAAGAGGATCCTGAAAGCAAAGGTCAGGAGGAGGAGGATGGAGACGAGGAACCTAGTTTGGCATCCCTTGTTGCTTAGATGGGGGAAATGCAGGAAGATATTTCCCAAATCCAATCGGCCTCGATCAAACACGAAGGAACTGAGATAGACTAAGTGTTCGTTGCAGTATCATTTTCACTGCTTTAAGTCTCCTCATTCATGTGGAAATTTCCGACCGGTCCCATCTTGAGGAGTTCGTTTGGGTCAGATGAAGACTAGCCCCTGACTTAGATAGGTGTGGTGCTCTCAGCTTAGGATTTTTAGTTTTTTTTTTCGTTTTCTAGTTTTTCTTTTCTAGTTTATTTTTTAGGTTAGTTATTTTATTAGCTTCCTTAAGGTTAGCTTAGGTTTTCGTTGGGATCTAGTACAAATTGTTGGTGTAAACCAAGTGGGGCATTTATTAAATGATTAAAAAATCTTCCACATCCTAAATCTAAATCTAACTACTTAAATTAAGAGCACAACTGAAAACCAGAATTGACTTATCAAATAAACAGAAAATTGTTTGTAGCTTCATAAACTAAGCTCTAACAGCTATTTCCTAAAACTGTAAATAATAGATTACATCAAGAGGACTGAGGAGAAAACCAGCCCTTGTCTTGACCTTTTAAAACTTTTCCTAGAAAGAAATTGAGCTGAGCATACAAGAAGCTTTCTCAAGCTCTGGATTCTCAATACCTTGCTTTCCTTTTTTAATTACTTGCAATGTTGCATTTGATATTTCATTTAAAATTTACAGCTTTTGTTTCTATTTCCATTTCTACACCGCATCAGCTGAAAAAGGAATTTCATCTCTCAGGCAATGAGCAAGTATGGACAGGTTAAAAATCTACGCTTAGTCAGACACATTGGTGATTTCCTTATCTAGTTCTCATTTTATCTCTTATTTGGCTCAAGGTGTTTTCTGTTTAGTGATTAGGTGCCCAAAATTCTATTCATATATCCAATATTTATGATATTCATACCATAAACATGTTTTACATTTATCAAATTACTCTGTTCATAGAAGTTCAACGAATGGAAGAGACCACAATGTTTCTGACCAAAACTGCATGATATTTTGCAGTAACTGGTTCTTCACGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCAACGTGCATATAAGGTGGTATAACTTTTTTAATCTTTTAGGTTTCATCTGAGCTGACACTTTTGTCTTGTTTTTGGTTTACATATTTATTTATTTACTTTGCTGTAAGGTGCTTAATATTAAACAAATTTGTGTGGGAGGGGATGTTATATTGCATTCTCTTCCAAGGTTACTAGGTTTTCTTATTAACTATTGGATCTTTGGAAGCTCTTAGTTGAGTGATTCTTGTTGCTTGTCCTACCTTTACTATCTCTTTCATTCATGAAATTTTTTCGTTCTTATAATTCTTTTGTAATTACAGCTTTCTTGTGATTCTTAACAATTAGAGGGCTCTTCTTGTTTAGTTTTGTGGGAGGGGGTTACCCCTTCCCTTAGTGTTCTTTTGGCTTTCTTGATGAATATGTTCCTTTGTTTCTCATAAAAAAATATATAGTTAATTAGTTAAAAAGAGCATCCAATCGTTTCACTTTTCAGTGTAAATACATTAATAAGTTTGTTTTGATGGTGAATGATATTGATTGATATTAAGTTCCTTTATTCATCAGGATGCTCATCATTCAATGATAGATGATTGTGAAATTATAGTTGATTACAATCGACAACGGCTTATGTCTGGATGGATTCCTCGGAGATTAGGTAAGTGGAAGTCATAGTTTGGCATAATAGTACTCCTTACTAAAGTCTATTTGATTTTTTCTGTGCTATTTGTAATAGGAGGGGGTCTTGGAGGTAAGAAGGAATCTGGACAACTTCGATTTGGAGGAAGAGAAAGACCATTCCGCGCTCCACTGTATGCTCTACTTTCCTCATTATGTAATGCTGGTTGGATATTAAACTCACACTTTATTTTCAGATGGATTTTGTTAGAAATAGTGGGCTTGGGTAGTTGAGATTTACTTTGCCCTAATTTTTAATTATTTTAATTAGTCTCATGTCGCCTATAAATATTTCCCTTTTGTGCCCTTATAATCAGAAAATAATAAGAAACATCTATACCGTGGTTTTCCTCATAGTGGGGTTTCCACGTAGACCTTGTGTTCTTTTTTCATCTCTATTTTTTTTATAGATTTTAATTCTGCTTCCTGGGTTCTCGTGTTATGCCAAAGAGTGTTTTGTTAGCATATAACTCTGGCTTGGAGCTAGTTGATTACCGCTACCCACGGTTGCATCTAAAGTAGCTAGGTCAGAAAGTAAATGTAATCCCTGTTCACTTGACGTTGAACTACCATTCCTCGCTATAATTTCCCTGCCCAATTAATAATCTGCTAATTCCAGTTATTCTCCAAGCTTATAGCAAGTACTTCAATGATGAGGTGGCTTCTTTCATTTTTGATGCATTTGTTTGCTAATTCAGTTTTTCGTTTGCATGCACTTATGTCATTCATTGAGTCAACACCTCTAATCCATACCCTTTTGGGCAGACGTCCGATCCCTTACGACGATTTGAAAAGGCTTGGGATTACTCCTCCTCCTGAAGGAAGATACAAGTCTCGGTTTCAGGTATTCTTTCACAAATATTATTGATCTCTCTTAAAACAAGGAATATATAAGCTTCATAATCGGTCTCTCAATTTAATCGCAGGAACGTCTTTGATGTTCATGCATACTGTAGAACCTTAACGTTGTTTCCACAGTACCATTCTTCTGCTTTTCCACTTGACATTTTGTAATGCAATTTGTTGTGGGAACGTCTATGATGTTCATACATCTTGTAGAACCTTAACGTGTTCTCCCAGTGTCACTCCTCTTCTCTTCCACTTGATATTTTGTAATGCAATGGATGATCACTTGAGTTGAACTGAGGTTTGTACATTATCGCACTAGAAGTAATATATTTTTTTTGTTGGTTTCTTGTTCGTTTTAGATACCTTCTCCTCCCAGAAGAGAAACGGATTCTGAACGTAGAGAAGAAGGCTCCAATAAGAATGAACCTACGGAGAAGGATGGACACAGTCATAGAAATAGTTCGATAGATGAAGATGATTGGTCACATACGAGGGGCTCAAATGACTACAGAGTGGGGCACTCACACAAGGGAAACCATGAGAAGATGAAACATGAATCTAGGAGGACCTCAAACGACAGGGATGATTATTCCCCCCACAAGAGATTTTCCGAGAAGGAAGACTATTATCAAAGCAGATCTGCTGAGAAGGAAGATCTTTATCGGAGGAGCTCTTCAGATAAGGACCGATCTCGCAGAAGAGATTCTAAAGATCGGGATGACCACTCAAGGAAGCATCACAAATCTCATAGATAGTGACTCCATTACCCATCTTAATAGGAATGAAGCCGATCTTGTTCACGTGTTGATCTTCATTTATGACGAACAAAAAAGTTAATCCATGTTAAATTAAATGAAGTTAAGTGACATTAAAGTTGAAGTTATGGAAGCCCTTTAGTTGCATTAAATGAATTCAAGTATATCTCAAGCTTCATGCTGTACAAGTCGAGCATCCATTCAGGAAACTACCGTTCAAATTGAGATTCATTTATACATGGGAGGTTCAGAGACTTTCAAGTCTGACAAAAAGGCTTCAATCTCAAATTTATGGTTCATCATTTTACTGTAACTATATAGTAAACCTTTATGTTTTTCAGATTACTTTGGAGTGAGTATCATGACACTCGTGTACTTCGAAGTTACAACCCATGAGAGTTTTGTTTTTATGGGTTAGGAAGTTACAACCCTTAAGTTGATATTTGGTTACTTAGCTAATTTTTATGTAAAATCACTTGAAGGATATAATAGAGTAAAAAGAGCTTTGAGCTTCTTTCTAGTTTAGAGGTTTTTTCTTTTAAAAATTAATTTTAATGTCAGTTCAAGTTGCATGATTAGAATTATTCAAGTTTTACATGATCAATCTTGCCGTGGAGTGTTTCAGATCTCAAACAATGAGTGATCCTCCTTGTAAGATATCAATTTTTTTTCTCAGTTGCAACCTTTGAAAACATATGA

mRNA sequence

CCATAATTTCCTCTTTACCTATAAATTTGCTCTTTCTTTTATATTTGGGTGATGAGCAACTTTCATTTATGGAGGGAGACGAGAAGTAGGCTTTGTGCGGCAATGAGTGGGAGCAACGTAAACAAGGTCTTTTACGCCGATAACTACCATCCCATTCAGGCCGGCAGCATCGACGGCACCGACATTCTTTCCCACGACAACGCCGTCTACCGAGCTTTACTCTGTTCTTCTGCTGGCCTCTATGACCCCCATGGCGATCCCAAGGTCTTCGGTGACCCTTATTGCACCCTCTTCGTTGGTCGCCTTTCACATCTCACTACTGAAGACACTCTTCGCAGGGCAATGAGCAAGTATGGACAGGTTAAAAATCTACGCTTAGTCAGACACATTGTAACTGGTTCTTCACGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCAACGTGCATATAAGGATGCTCATCATTCAATGATAGATGATTGTGAAATTATAGTTGATTACAATCGACAACGGCTTATGTCTGGATGGATTCCTCGGAGATTAGGAGGGGGTCTTGGAGGTAAGAAGGAATCTGGACAACTTCGATTTGGAGGAAGAGAAAGACCATTCCGCGCTCCACTACGTCCGATCCCTTACGACGATTTGAAAAGGCTTGGGATTACTCCTCCTCCTGAAGGAAGATACAAGTCTCGGTTTCAGATACCTTCTCCTCCCAGAAGAGAAACGGATTCTGAACGTAGAGAAGAAGGCTCCAATAAGAATGAACCTACGGAGAAGGATGGACACAGTCATAGAAATAGTTCGATAGATGAAGATGATTGGTCACATACGAGGGGCTCAAATGACTACAGAGTGGGGCACTCACACAAGGGAAACCATGAGAAGATGAAACATGAATCTAGGAGGACCTCAAACGACAGGGATGATTATTCCCCCCACAAGAGATTTTCCGAGAAGGAAGACTATTATCAAAGCAGATCTGCTGAGAAGGAAGATCTTTATCGGAGGAGCTCTTCAGATAAGGACCGATCTCGCAGAAGAGATTCTAAAGATCGGGATGACCACTCAAGGAAGCATCACAAATCTCATAGATAGTGACTCCATTACCCATCTTAATAGGAATGAAGCCGATCTTGTTCACGTGTTGATCTTCATTTATGACGAACAAAAAAGTTAATCCATGTTAAATTAAATGAAGTTAAGTGACATTAAAGTTGAAGTTATGGAAGCCCTTTAGTTGCATTAAATGAATTCAAGTATATCTCAAGCTTCATGCTGTACAAGTCGAGCATCCATTCAGGAAACTACCGTTCAAATTGAGATTCATTTATACATGGGAGGTTCAGAGACTTTCAAGTCTGACAAAAAGGCTTCAATCTCAAATTTATGGTTCATCATTTTACTGTAACTATATAGTAAACCTTTATGTTTTTCAGATTACTTTGGAGTGAGTATCATGACACTCGTGTACTTCGAAGTTACAACCCATGAGAGTTTTGTTTTTATGGGTTAGGAAGTTACAACCCTTAAGTTGATATTTGGTTACTTAGCTAATTTTTATGTAAAATCACTTGAAGGATATAATAGAGTAAAAAGAGCTTTGAGCTTCTTTCTAGTTTAGAGGTTTTTTCTTTTAAAAATTAATTTTAATGTCAGTTCAAGTTGCATGATTAGAATTATTCAAGTTTTACATGATCAATCTTGCCGTGGAGTGTTTCAGATCTCAAACAATGAGTGATCCTCCTTGTAAGATATCAATTTTTTTTCTCAGTTGCAACCTTTGAAAACATATGA

Coding sequence (CDS)

ATGAGCAACTTTCATTTATGGAGGGAGACGAGAAGTAGGCTTTGTGCGGCAATGAGTGGGAGCAACGTAAACAAGGTCTTTTACGCCGATAACTACCATCCCATTCAGGCCGGCAGCATCGACGGCACCGACATTCTTTCCCACGACAACGCCGTCTACCGAGCTTTACTCTGTTCTTCTGCTGGCCTCTATGACCCCCATGGCGATCCCAAGGTCTTCGGTGACCCTTATTGCACCCTCTTCGTTGGTCGCCTTTCACATCTCACTACTGAAGACACTCTTCGCAGGGCAATGAGCAAGTATGGACAGGTTAAAAATCTACGCTTAGTCAGACACATTGTAACTGGTTCTTCACGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCAACGTGCATATAAGGATGCTCATCATTCAATGATAGATGATTGTGAAATTATAGTTGATTACAATCGACAACGGCTTATGTCTGGATGGATTCCTCGGAGATTAGGAGGGGGTCTTGGAGGTAAGAAGGAATCTGGACAACTTCGATTTGGAGGAAGAGAAAGACCATTCCGCGCTCCACTACGTCCGATCCCTTACGACGATTTGAAAAGGCTTGGGATTACTCCTCCTCCTGAAGGAAGATACAAGTCTCGGTTTCAGATACCTTCTCCTCCCAGAAGAGAAACGGATTCTGAACGTAGAGAAGAAGGCTCCAATAAGAATGAACCTACGGAGAAGGATGGACACAGTCATAGAAATAGTTCGATAGATGAAGATGATTGGTCACATACGAGGGGCTCAAATGACTACAGAGTGGGGCACTCACACAAGGGAAACCATGAGAAGATGAAACATGAATCTAGGAGGACCTCAAACGACAGGGATGATTATTCCCCCCACAAGAGATTTTCCGAGAAGGAAGACTATTATCAAAGCAGATCTGCTGAGAAGGAAGATCTTTATCGGAGGAGCTCTTCAGATAAGGACCGATCTCGCAGAAGAGATTCTAAAGATCGGGATGACCACTCAAGGAAGCATCACAAATCTCATAGATAG

Protein sequence

MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR*

Homology

[Close]

BLAST of CsGy3G015740 vs. ExPASy Swiss-Prot
Match: Q8VY74 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP35 PE=1 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-96
Identity = 206/344 (59.88%), Postives = 240/344 (69.77%), Query Frame = 0


Query: 20  GSN-VNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYC 79
           G+N VNKVFYA +YHPIQAGSIDGTD+  HDN V RALLC +AGLYDP GD K  GDPYC
Sbjct: 5   GNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYC 64

Query: 80  TLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKD 139
           TLFVGRLSH TTEDTLR  MSKYG++KNLRLVRHIVTG+SRGY FVEYETEKEM RAY+D
Sbjct: 65  TLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYED 124

Query: 140 AHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPY 199
           AHHS+ID  EIIVDYNRQ+LM GWIPRRLGGGLGG+KESGQLRFGGR+RPFRAPLRPIP+
Sbjct: 125 AHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAPLRPIPH 184

Query: 200 DDLKRLGITPPPEGRYKSRFQIPSPPRRE-TDSERREEGSNKNEPTEKDGHSHRNSSIDE 259
           +DLK+LGI  PPEGRY SR QIPSPPRR+ + S+R EE   +    E++      SS+  
Sbjct: 185 EDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSDREEEYYREKSSVEREEEFKERSSL-- 244

Query: 260 DDWSHTRGSNDYRVGHSHKGN-HEKMKHESRRTSNDRDDYSPHKRFSEK-------EDYY 319
                       R  HSH+ + H    H  RR S DR++ S  +  S++       ED Y
Sbjct: 245 ------------RSYHSHRSSAHTHSSH--RRRSKDREECSREESRSDRKERARGMEDRY 304

Query: 320 QSRSAEKEDLYRRSSSDKDRSRRR-----DSKDRDDHSRKHHKS 349
                E     R   S++DRSR+R         R  +S+ HH S
Sbjct: 305 GDNKGEVSGSKRSKRSEEDRSRKRHKHLPSHHHRRSYSQDHHSS 332

[Close]

BLAST of CsGy3G015740 vs. ExPASy Swiss-Prot
Match: Q16560 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP35 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.2e-47
Identity = 120/255 (47.06%), Postives = 155/255 (60.78%), Query Frame = 0


Query: 29  ADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSHL 88
           A  Y P++AGSIDGTD   HD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 67

Query: 89  TTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCE 148
           T ED L+   S+YG ++ LRLVR +VTG S+GYAF+EY+ E+ + +AY+DA   +ID  E
Sbjct: 68  TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHE 127

Query: 149 IIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLR-PIPYDDLKRLGIT 208
           I VDY  +R + GWIPRRLGGGLGGKKESGQLRFGGR+RPFR P+  P+  +DL R G  
Sbjct: 128 IFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVKNDLYREGKR 187

Query: 209 PPPEGRYKSRFQIPSPPRRETDSER-REEGSNKNEPTEKDGHSHRNSSIDEDDWSHTRGS 268
              E R +SR +      R+ D +R RE+   + EPT             ++DW   R  
Sbjct: 188 ERRE-RSRSRERHWDSRTRDRDHDRGREKRWQEREPTR---------VWPDNDWERERDF 242

Query: 269 NDYRVGHSHKGNHEK 282
            D R+    KG  +K
Sbjct: 248 RDDRI----KGREKK 242

[Close]

BLAST of CsGy3G015740 vs. ExPASy Swiss-Prot
Match: Q1LZH0 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus OX=9913 GN=SNRNP35 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 117/254 (46.06%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 29  ADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSHL 88
           A  Y P++AGSIDGTD   HD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 67

Query: 89  TTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCE 148
           T E+ L+   S+YG ++ LRLVR +VTG S+GYAF+EY+ E+ + +AY+DA   +ID  E
Sbjct: 68  TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHE 127

Query: 149 IIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLR-PIPYDDLKRLGIT 208
           I VDY  +R + GWIPRRLGGGLGGKKESGQLRFGGR+RPFR P+  P+  +D  R G  
Sbjct: 128 IFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVKNDQFREG-- 187

Query: 209 PPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDEDDWSHTRGSN 268
              E R +SR +      R  DS  R+      E   ++    R  +  E DW   R   
Sbjct: 188 -KRERRERSRSR-----ERHWDSRMRDHHDRGREKRWQEREPAR--AWPEGDWERERDFR 245

Query: 269 DYRVGHSHKGNHEK 282
           D RV    K +  K
Sbjct: 248 DDRVKGREKRDRSK 245

[Close]

BLAST of CsGy3G015740 vs. ExPASy Swiss-Prot
Match: Q9D384 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus OX=10090 GN=Snrnp35 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 116/255 (45.49%), Postives = 151/255 (59.22%), Query Frame = 0


Query: 29  ADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSHL 88
           A  Y P++AGSIDGTD   HD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 67

Query: 89  TTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCE 148
           T E+ L+   S+YG ++ LRLVR +VTG S+GYAF+EY+ E+ + +AY+DA   +ID  E
Sbjct: 68  TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHE 127

Query: 149 IIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLR-PIPYDDLKRLGIT 208
           I VDY  +R + GWIPRRLGGGLGGKKESGQLRFGGR+RPFR P+  P+  ++  R G  
Sbjct: 128 IFVDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVKNEPHREGKR 187

Query: 209 PPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSI-DEDDWSHTRGS 268
              E R +SR +   P  RE D +R  E            H    + +  E+DW   R  
Sbjct: 188 ERRE-RSRSRDRHWDPRPRERDHDRGRE-----------KHWQERARVWPENDWEREREF 244

Query: 269 NDYRVGHSHKGNHEK 282
            + RV    K +  K
Sbjct: 248 REERVKSRDKRDRSK 244

[Close]

BLAST of CsGy3G015740 vs. ExPASy Swiss-Prot
Match: Q5U1W5 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus OX=10116 GN=Snrnp35 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-45
Identity = 116/254 (45.67%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 29  ADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSHL 88
           A  Y P++AGSIDGTD   HD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNSQ 67

Query: 89  TTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCE 148
           T E+ L+   S+YG ++ LRLVR +VTG S+GYAF+EY+ E+ + +AY+DA   +ID  E
Sbjct: 68  TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHE 127

Query: 149 IIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLR-PIPYDDLKRLGIT 208
           I VDY  +R + GWIPRRLGGGLGGKKESGQLRFGGR+RPFR P+  P+  ++  R G  
Sbjct: 128 IFVDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVKNEPHREGKR 187

Query: 209 PPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDEDDWSHTRGSN 268
              E R +SR +   P  RE D +R  E   ++          R     E+DW   R   
Sbjct: 188 ERRE-RSRSRDRHWDPRPRERDHDRGREKHWQD----------RARVWPENDWEREREFR 244

Query: 269 DYRVGHSHKGNHEK 282
           D R     K +  K
Sbjct: 248 DERAKTRDKRDRSK 244

[Close]

BLAST of CsGy3G015740 vs. NCBI nr
Match: XP_004147652.2 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis sativus])

HSP 1 Score: 700 bits (1806), Expect = 3.64e-254
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSS 60
           MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSS
Sbjct: 1   MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSS 60

Query: 61  AGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRG 120
           AGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRG
Sbjct: 61  AGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRG 120

Query: 121 YAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQL 180
           YAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQL
Sbjct: 121 YAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQL 180

Query: 181 RFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKN 240
           RFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKN
Sbjct: 181 RFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKN 240

Query: 241 EPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHK 300
           EPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHK
Sbjct: 241 EPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHK 300

Query: 301 RFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           RFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR
Sbjct: 301 RFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350

[Close]

BLAST of CsGy3G015740 vs. NCBI nr
Match: XP_031739123.1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X2 [Cucumis sativus] >KAE8650421.1 hypothetical protein Csa_011707 [Cucumis sativus])

HSP 1 Score: 660 bits (1704), Expect = 1.19e-238
Identity = 334/350 (95.43%), Postives = 338/350 (96.57%), Query Frame = 0


Query: 1   MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSS 60
           MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSS
Sbjct: 1   MSNFHLWRETRSRLCAAMSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSS 60

Query: 61  AGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRG 120
           AGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRR   ++    N ++    VTGSSRG
Sbjct: 61  AGLYDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRLKKEFHLSGNEQV--WTVTGSSRG 120

Query: 121 YAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQL 180
           YAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQL
Sbjct: 121 YAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQL 180

Query: 181 RFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKN 240
           RFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKN
Sbjct: 181 RFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKN 240

Query: 241 EPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHK 300
           EPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHK
Sbjct: 241 EPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHK 300

Query: 301 RFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           RFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR
Sbjct: 301 RFSEKEDYYQSRSAEKEDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 348

[Close]

BLAST of CsGy3G015740 vs. NCBI nr
Match: XP_008439055.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis melo])

HSP 1 Score: 644 bits (1662), Expect = 1.71e-232
Identity = 324/333 (97.30%), Postives = 328/333 (98.50%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNVNKVFYADNYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDPHGDPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTEDTLRRAMSKYGQVK+LRLVRHIVTGSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKDLRLVRHIVTGSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           YDDLKRLGITPPPEGRY SRFQIPSPPRRETDSERREEGSNKNEPTEKDGH+HRNSSIDE
Sbjct: 181 YDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHNHRNSSIDE 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTRGSNDYR GHSHKGN+EKMKHESRRTSNDRDDYSPHKRFS KEDYYQ RSAEKE
Sbjct: 241 DDWSHTRGSNDYRGGHSHKGNNEKMKHESRRTSNDRDDYSPHKRFSGKEDYYQRRSAEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR
Sbjct: 301 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 333

[Close]

BLAST of CsGy3G015740 vs. NCBI nr
Match: KAA0067647.1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis melo var. makuwa] >TYK23649.1 U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 640 bits (1652), Expect = 5.73e-231
Identity = 322/333 (96.70%), Postives = 327/333 (98.20%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNVNKVFYADNYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDPHGDPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTEDTLRRAMSKYGQVK+LRLVRHIVTGSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKDLRLVRHIVTGSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           YDDLKRLGITPPPEGRY SRFQIPSPPRR TDSERREEGSNKNEPTEKDGH+HRNSSIDE
Sbjct: 181 YDDLKRLGITPPPEGRYMSRFQIPSPPRRGTDSERREEGSNKNEPTEKDGHNHRNSSIDE 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTRGSNDYR GHSHKGN+EKMKHESRRTS DRDDYSPHKRFSEKEDYYQ RSAEKE
Sbjct: 241 DDWSHTRGSNDYRGGHSHKGNNEKMKHESRRTSKDRDDYSPHKRFSEKEDYYQRRSAEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           DLYRRSSSDKDRSRRRDS+DRDDHSRKHHKSHR
Sbjct: 301 DLYRRSSSDKDRSRRRDSEDRDDHSRKHHKSHR 333

[Close]

BLAST of CsGy3G015740 vs. NCBI nr
Match: XP_016899124.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X2 [Cucumis melo])

HSP 1 Score: 636 bits (1640), Expect = 3.59e-229
Identity = 322/333 (96.70%), Postives = 326/333 (97.90%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNVNKVFYADNYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDPHGDPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTEDTLRRAMSKYGQVK+LRLVRHI  GSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKDLRLVRHI--GSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           YDDLKRLGITPPPEGRY SRFQIPSPPRRETDSERREEGSNKNEPTEKDGH+HRNSSIDE
Sbjct: 181 YDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHNHRNSSIDE 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTRGSNDYR GHSHKGN+EKMKHESRRTSNDRDDYSPHKRFS KEDYYQ RSAEKE
Sbjct: 241 DDWSHTRGSNDYRGGHSHKGNNEKMKHESRRTSNDRDDYSPHKRFSGKEDYYQRRSAEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR
Sbjct: 301 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 331

[Close]

BLAST of CsGy3G015740 vs. ExPASy TrEMBL
Match: A0A1S3AXF1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucumis melo OX=3656 GN=LOC103483955 PE=4 SV=1)

HSP 1 Score: 644 bits (1662), Expect = 8.30e-233
Identity = 324/333 (97.30%), Postives = 328/333 (98.50%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNVNKVFYADNYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDPHGDPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTEDTLRRAMSKYGQVK+LRLVRHIVTGSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKDLRLVRHIVTGSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           YDDLKRLGITPPPEGRY SRFQIPSPPRRETDSERREEGSNKNEPTEKDGH+HRNSSIDE
Sbjct: 181 YDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHNHRNSSIDE 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTRGSNDYR GHSHKGN+EKMKHESRRTSNDRDDYSPHKRFS KEDYYQ RSAEKE
Sbjct: 241 DDWSHTRGSNDYRGGHSHKGNNEKMKHESRRTSNDRDDYSPHKRFSGKEDYYQRRSAEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR
Sbjct: 301 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 333

[Close]

BLAST of CsGy3G015740 vs. ExPASy TrEMBL
Match: A0A5A7VKF1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00140 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 2.77e-231
Identity = 322/333 (96.70%), Postives = 327/333 (98.20%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNVNKVFYADNYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDPHGDPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTEDTLRRAMSKYGQVK+LRLVRHIVTGSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKDLRLVRHIVTGSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           YDDLKRLGITPPPEGRY SRFQIPSPPRR TDSERREEGSNKNEPTEKDGH+HRNSSIDE
Sbjct: 181 YDDLKRLGITPPPEGRYMSRFQIPSPPRRGTDSERREEGSNKNEPTEKDGHNHRNSSIDE 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTRGSNDYR GHSHKGN+EKMKHESRRTS DRDDYSPHKRFSEKEDYYQ RSAEKE
Sbjct: 241 DDWSHTRGSNDYRGGHSHKGNNEKMKHESRRTSKDRDDYSPHKRFSEKEDYYQRRSAEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           DLYRRSSSDKDRSRRRDS+DRDDHSRKHHKSHR
Sbjct: 301 DLYRRSSSDKDRSRRRDSEDRDDHSRKHHKSHR 333

[Close]

BLAST of CsGy3G015740 vs. ExPASy TrEMBL
Match: A0A1S4DT11 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucumis melo OX=3656 GN=LOC103483955 PE=4 SV=1)

HSP 1 Score: 636 bits (1640), Expect = 1.74e-229
Identity = 322/333 (96.70%), Postives = 326/333 (97.90%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNVNKVFYADNYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDPHGDPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTEDTLRRAMSKYGQVK+LRLVRHI  GSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKDLRLVRHI--GSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           YDDLKRLGITPPPEGRY SRFQIPSPPRRETDSERREEGSNKNEPTEKDGH+HRNSSIDE
Sbjct: 181 YDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHNHRNSSIDE 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTRGSNDYR GHSHKGN+EKMKHESRRTSNDRDDYSPHKRFS KEDYYQ RSAEKE
Sbjct: 241 DDWSHTRGSNDYRGGHSHKGNNEKMKHESRRTSNDRDDYSPHKRFSGKEDYYQRRSAEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR
Sbjct: 301 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 331

[Close]

BLAST of CsGy3G015740 vs. ExPASy TrEMBL
Match: A0A6J1C9C6 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Momordica charantia OX=3673 GN=LOC111009418 PE=4 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 4.12e-194
Identity = 281/334 (84.13%), Postives = 305/334 (91.32%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           M+GSNVNKVF+A+NYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDP GDPKV GDPY
Sbjct: 1   MNGSNVNKVFFAENYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPKVSGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLT EDTLRRAMSKYG+VKNLRLVRHIVTGSSRGYAFVEYETEKEM+RAYK
Sbjct: 61  CTLFVGRLSHLTDEDTLRRAMSKYGRVKNLRLVRHIVTGSSRGYAFVEYETEKEMRRAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQ+LM GW+PRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQQLMPGWVPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           +DDLKRLGITPPPEGRY SRFQ+PSPPRRETDS  REEGS++ +  EKDGH+ R+SSIDE
Sbjct: 181 FDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVCREEGSSERDSLEKDGHTRRSSSIDE 240

Query: 258 DD-WSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEK 317
           DD WS TRGS+DYR GHSHKGN+EK KHESRR SN++D++SP   + E ED YQ RS+EK
Sbjct: 241 DDDWSRTRGSSDYR-GHSHKGNYEKTKHESRRFSNEKDEHSPRMSYYENEDRYQRRSSEK 300

Query: 318 EDLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           ED Y RSS DKDRSRRRDS DRDDH+RK +KSHR
Sbjct: 301 EDRYWRSSLDKDRSRRRDSNDRDDHTRKRYKSHR 333

[Close]

BLAST of CsGy3G015740 vs. ExPASy TrEMBL
Match: A0A6J1IB25 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111470870 PE=4 SV=1)

HSP 1 Score: 540 bits (1390), Expect = 1.41e-191
Identity = 281/333 (84.38%), Postives = 295/333 (88.59%), Query Frame = 0


Query: 18  MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 77
           MSGSNV+KVFYA+NYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDP  DPKVFGDPY
Sbjct: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLRDPKVFGDPY 60

Query: 78  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 137
           CTLFVGRLSHLTTED+LRRAMSKYG+VKNLRLVRHIVTGSSRGYAFVEYETEKEM+ AYK
Sbjct: 61  CTLFVGRLSHLTTEDSLRRAMSKYGRVKNLRLVRHIVTGSSRGYAFVEYETEKEMRHAYK 120

Query: 138 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 197
           DAHHSMIDDCEIIVDYNRQ+LM GWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 198 YDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNEPTEKDGHSHRNSSIDE 257
           +DDLKRLGITPPPEGRY SRFQ+PSPPRRETDS  REEGS+  +  EKDGHS R+SS D 
Sbjct: 181 HDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVCREEGSSVKDSVEKDGHS-RSSSTDG 240

Query: 258 DDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRDDYSPHKRFSEKEDYYQSRSAEKE 317
           DDWSHTR  NDYR GHSHKGN+EKMKHESRR SND            KEDYYQ  S+EKE
Sbjct: 241 DDWSHTRSPNDYRGGHSHKGNYEKMKHESRRGSND------------KEDYYQRSSSEKE 300

Query: 318 DLYRRSSSDKDRSRRRDSKDRDDHSRKHHKSHR 350
           D Y+R SSDKDRSRRRDS DRDDHSRK HKS R
Sbjct: 301 DRYQRRSSDKDRSRRRDSNDRDDHSRKRHKSRR 320

[Close]

BLAST of CsGy3G015740 vs. TAIR 10
Match: AT2G43370.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-97
Identity = 206/344 (59.88%), Postives = 240/344 (69.77%), Query Frame = 0


Query: 20  GSN-VNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYC 79
           G+N VNKVFYA +YHPIQAGSIDGTD+  HDN V RALLC +AGLYDP GD K  GDPYC
Sbjct: 5   GNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYC 64

Query: 80  TLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKD 139
           TLFVGRLSH TTEDTLR  MSKYG++KNLRLVRHIVTG+SRGY FVEYETEKEM RAY+D
Sbjct: 65  TLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYED 124

Query: 140 AHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPY 199
           AHHS+ID  EIIVDYNRQ+LM GWIPRRLGGGLGG+KESGQLRFGGR+RPFRAPLRPIP+
Sbjct: 125 AHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAPLRPIPH 184

Query: 200 DDLKRLGITPPPEGRYKSRFQIPSPPRRE-TDSERREEGSNKNEPTEKDGHSHRNSSIDE 259
           +DLK+LGI  PPEGRY SR QIPSPPRR+ + S+R EE   +    E++      SS+  
Sbjct: 185 EDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSDREEEYYREKSSVEREEEFKERSSL-- 244

Query: 260 DDWSHTRGSNDYRVGHSHKGN-HEKMKHESRRTSNDRDDYSPHKRFSEK-------EDYY 319
                       R  HSH+ + H    H  RR S DR++ S  +  S++       ED Y
Sbjct: 245 ------------RSYHSHRSSAHTHSSH--RRRSKDREECSREESRSDRKERARGMEDRY 304

Query: 320 QSRSAEKEDLYRRSSSDKDRSRRR-----DSKDRDDHSRKHHKS 349
                E     R   S++DRSR+R         R  +S+ HH S
Sbjct: 305 GDNKGEVSGSKRSKRSEEDRSRKRHKHLPSHHHRRSYSQDHHSS 332

[Close]

BLAST of CsGy3G015740 vs. TAIR 10
Match: AT3G50670.1 (U1 small nuclear ribonucleoprotein-70K )

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-20
Identity = 91/302 (30.13%), Postives = 138/302 (45.70%), Query Frame = 0


Query: 64  YDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAF 123
           YDP+ DP   GDPY TLFV RL++ ++E  ++R    YG +K + LV   +T   +GYAF
Sbjct: 124 YDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAF 183

Query: 124 VEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGL------GGKKES 183
           +EY   ++M+ AYK A    ID   ++VD  R R +  W PRRLGGGL      GG++  
Sbjct: 184 IEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIV 243

Query: 184 GQLRFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGS 243
           G+ +  GR      P RP    +  R       + R +SR      PR  +    RE+  
Sbjct: 244 GEQQPQGRTSQSEEPSRPREEREKSR----EKGKERERSRELSHEQPRERSRDRPREDKH 303

Query: 244 NKNEPTEKDGHSHRNSSIDEDDWSHTRGSNDYRVGHSHKGNHEKMKHESRRTSNDRD--- 303
           +++   ++ G      S  + D +  RG  D R     +    +     R    +RD   
Sbjct: 304 HRDR--DQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEG 363

Query: 304 ---DYSPHKRFSEKEDYYQSRSAEKEDLYRRSSSDKDR-SRRRDSKDRDD--HSRKHHKS 351
              ++    R  E++  Y+    E    Y     D DR S R D  + DD  + R++ +S
Sbjct: 364 GEYEHEGGGRSRERDAEYRGEPEETRGYYEDDQGDTDRYSHRYDKMEEDDFRYEREYKRS 419

[Close]

BLAST of CsGy3G015740 vs. TAIR 10
Match: AT1G73530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-10
Identity = 42/136 (30.88%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 35  IQAGSID-GTDILS--HDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSHLTTE 94
           +  G I+ GT ++S      +   L+ S          P     P   L+V  LS  TTE
Sbjct: 31  VSCGRINVGTGVISARRRRDIGGVLISSCLSTDSSSSPPSSSSGPKTKLYVSGLSFRTTE 90

Query: 95  DTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCEIIV 154
           DTLR    ++G + ++ +V   V    +G+AF+ YETE+E  +A +  H   +D   I V
Sbjct: 91  DTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFV 150

Query: 155 DYNRQRL-MSGWIPRR 167
           +  + R  MS   PRR
Sbjct: 151 EEAKTRSDMSRAKPRR 166

[Close]

BLAST of CsGy3G015740 vs. TAIR 10
Match: AT3G50670.2 (U1 small nuclear ribonucleoprotein-70K )

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-08
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 64  YDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSR 120
           YDP+ DP   GDPY TLFV RL++ ++E  ++R    YG +K +    H + GS R
Sbjct: 124 YDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVGYSEHSLAGSVR 179

[Close]

BLAST of CsGy3G015740 vs. TAIR 10
Match: AT5G54580.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-08
Identity = 34/114 (29.82%), Postives = 55/114 (48.25%), Query Frame = 0


Query: 54  RALLCSSAGLY---DPHGDPKV----FGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKN 113
           R L CS+A  +    P  + +       +P   LFV  LS  TT + LR A +++G+V +
Sbjct: 25  RRLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVAD 84

Query: 114 LRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMS 161
            ++V   V+G S+G+ FV Y T ++  +         +D   I  +Y R R  S
Sbjct: 85  AKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYARPREQS 138

The following BLAST results are available for this feature:

BLAST of CsGy3G015740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY74	1.5e-96	59.88	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Arabidopsis thaliana O...	[more]
Q16560	2.2e-47	47.06	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q1LZH0	1.2e-45	46.06	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus OX=9913 GN=...	[more]
Q9D384	1.2e-45	45.49	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q5U1W5	2.7e-45	45.67	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus OX=1...	[more]

BLAST of CsGy3G015740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147652.2	3.64e-254	100.00	U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis sativ...	[more]
XP_031739123.1	1.19e-238	95.43	U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X2 [Cucumis sativ...	[more]
XP_008439055.1	1.71e-232	97.30	PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cu...	[more]
KAA0067647.1	5.73e-231	96.70	U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis melo ...	[more]
XP_016899124.1	3.59e-229	96.70	PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X2 [Cu...	[more]

BLAST of CsGy3G015740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXF1	8.30e-233	97.30	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucumis melo OX=3656 G...	[more]
A0A5A7VKF1	2.77e-231	96.70	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucumis melo var. maku...	[more]
A0A1S4DT11	1.74e-229	96.70	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucumis melo OX=3656 G...	[more]
A0A6J1C9C6	4.12e-194	84.13	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Momordica charantia OX...	[more]
A0A6J1IB25	1.41e-191	84.38	U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Cucurbita maxima OX=36...	[more]

BLAST of CsGy3G015740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43370.1	1.1e-97	59.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G50670.1	2.4e-20	30.13	U1 small nuclear ribonucleoprotein-70K	[more]
AT1G73530.1	3.8e-10	30.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G50670.2	2.1e-08	42.86	U1 small nuclear ribonucleoprotein-70K	[more]
AT5G54580.1	2.7e-08	29.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 79..152 e-value: 2.5E-21 score: 86.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 80..149 e-value: 1.4E-18 score: 66.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 78..156 score: 16.261356
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 65..185 e-value: 1.7E-31 score: 110.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..341
None	No IPR available	PANTHER	PTHR13952:SF6	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN	coord: 22..270
None	No IPR available	PANTHER	PTHR13952	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD	coord: 22..270
IPR034146	snRNP35, RNA recognition motif	CDD	cd12237	RRM_snRNP35	coord: 75..164 e-value: 8.44062E-51 score: 162.428
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 66..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G015740.2	CsGy3G015740.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding