CsGy3G015425 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G015425
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DNA binding protein
Location	Gy14Chr3: 11420632 .. 11422105 (-)
RNA-Seq Expression	CsGy3G015425
Synteny	CsGy3G015425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCGTCGAAGATTAAATTGATCTTCTTCTCTTCTTCTCTTCTTCTTCTTCTTCGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTCTCAGATCCCCACCGGGCTTTCATTGGGTTCTCTCTCTCCGTCTCCCATTCTAGGGTTTCTGTTCCGGCGAATGCTACTGTTCCTCCGATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCTGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCGAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGAGGGGGAATCGAACTCCATAACGAAGGTAGTTGATTAAGGAAACTAACTGTAGAGGGTAGTCTTGTTCAACTGTCTCATTCAATTGAGTTCCTCGAAGATTCAGTAGAATACAAAGCGTTGAGGTACTATCAAACCATCCACAGAAACCTTCTGGATCAATGTAGTGATGAACAATCAATTGAGGGAAGTCTGAATGAATTTCTATGTACATTTCAAAATTTCATCACTGTTTGCTTAACCGTTTTGGAAGATTTTCGCCTAATTGAAGTTCTATTGAGAACGTTGCATTGCAGCAGCTTGTTCAGCTTCTCTATTGATTCCAATTCTTTATTTTATCACTTGTGTTTCTGTTTTATCTGATTCTCAGCTTCTTCTTCATTCTGCTCTCTTCTATCGACTATTTTTGTCAGAATCTCAAAGCTTTTATGGGTGAGAACGCCATTGTTGCCACCTTTGAGCTACTAGAATCGCCATTCGCCCATTGATATTCAAATGCCAGTTCTGGCGGAGCAGTGGTCATATCAAGAAGTGACGGCGATGGCGATGGCGATGGCGATGGCGATGACGATTGAGCTGGTATTTTGTTAAGTGAAATTGAC

mRNA sequence

TATGCGTCGAAGATTAAATTGATCTTCTTCTCTTCTTCTCTTCTTCTTCTTCTTCGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTCTCAGATCCCCACCGGGCTTTCATTGGGTTCTCTCTCTCCGTCTCCCATTCTAGGGTTTCTGTTCCGGCGAATGCTACTGTTCCTCCGATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCTGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCGAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGAGGGGGAATCGAACTCCATAACGAAGGTAGTTGATTAAGGAAACTAACTGTAGAGGGTAGTCTTGTTCAACTGTCTCATTCAATTGAGTTCCTCGAAGATTCAGTAGAATACAAAGCGTTGAGGTACTATCAAACCATCCACAGAAACCTTCTGGATCAATGTAGTGATGAACAATCAATTGAGGGAAGTCTGAATGAATTTCTATGTACATTTCAAAATTTCATCACTGTTTGCTTAACCGTTTTGGAAGATTTTCGCCTAATTGAAGTTCTATTGAGAACGTTGCATTGCAGCAGCTTGTTCAGCTTCTCTATTGATTCCAATTCTTTATTTTATCACTTGTGTTTCTGTTTTATCTGATTCTCAGCTTCTTCTTCATTCTGCTCTCTTCTATCGACTATTTTTGTCAGAATCTCAAAGCTTTTATGGGTGAGAACGCCATTGTTGCCACCTTTGAGCTACTAGAATCGCCATTCGCCCATTGATATTCAAATGCCAGTTCTGGCGGAGCAGTGGTCATATCAAGAAGTGACGGCGATGGCGATGGCGATGGCGATGGCGATGACGATTGAGCTGGTATTTTGTTAAGTGAAATTGAC

Coding sequence (CDS)

ATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCTGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCGAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGA

Protein sequence

MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL*

Homology

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BLAST of CsGy3G015425 vs. NCBI nr
Match: KAE8650412.1 (hypothetical protein Csa_010702 [Cucumis sativus])

HSP 1 Score: 454 bits (1167), Expect = 8.61e-161
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 230
           ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 230

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BLAST of CsGy3G015425 vs. NCBI nr
Match: XP_004147629.1 (uncharacterized protein LOC101204799 [Cucumis sativus])

HSP 1 Score: 440 bits (1131), Expect = 1.50e-154
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 223
           ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 223

[Close]

BLAST of CsGy3G015425 vs. NCBI nr
Match: KAA0052154.1 (DNA binding protein [Cucumis melo var. makuwa] >TYK05119.1 DNA binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 424 bits (1090), Expect = 4.55e-149
Identity = 219/230 (95.22%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 230
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+VTAIFDL
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKEVTAIFDL 229

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BLAST of CsGy3G015425 vs. NCBI nr
Match: XP_016899011.1 (PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo])

HSP 1 Score: 414 bits (1063), Expect = 8.50e-145
Identity = 213/229 (93.01%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 229
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+   +F+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKERVVLFN 228

[Close]

BLAST of CsGy3G015425 vs. NCBI nr
Match: ADN34038.1 (DNA binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 410 bits (1054), Expect = 7.24e-143
Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 223
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKE 222

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BLAST of CsGy3G015425 vs. ExPASy TrEMBL
Match: A0A0A0L5G4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 4.38e-160
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 186 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 245

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 230
           ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Sbjct: 246 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 295

[Close]

BLAST of CsGy3G015425 vs. ExPASy TrEMBL
Match: A0A5A7U9X0 (DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00230 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 2.20e-149
Identity = 219/230 (95.22%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 230
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+VTAIFDL
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKEVTAIFDL 229

[Close]

BLAST of CsGy3G015425 vs. ExPASy TrEMBL
Match: A0A1S4DSP5 (uncharacterized protein LOC103483924 OS=Cucumis melo OX=3656 GN=LOC103483924 PE=4 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 4.12e-145
Identity = 213/229 (93.01%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 229
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+   +F+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKERVVLFN 228

[Close]

BLAST of CsGy3G015425 vs. ExPASy TrEMBL
Match: E5GC39 (DNA binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 3.51e-143
Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 223
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKE 222

[Close]

BLAST of CsGy3G015425 vs. ExPASy TrEMBL
Match: A0A6J1IXP5 (uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.65e-113
Identity = 177/229 (77.29%), Postives = 196/229 (85.59%), Query Frame = 0


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNR H NHLQSNSIS+C +CGISQS CWILHNVR KA+FRRLCTNCVLK+NLSRFCPLCF
Sbjct: 1   MNRPHCNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           D+Y+DSTPP SH RVMCFRCPSISH+SC SFRFSSTFLCPLCSDP F FFDGFDSG SL 
Sbjct: 61  DIYDDSTPPSSHQRVMCFRCPSISHISCTSFRFSSTFLCPLCSDPCFAFFDGFDSG-SLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSE  V+ LAG+  D KS KAIVAAARV AQSMRRAA DARAVAEMK +NA FAKKQATL
Sbjct: 121 QSELAVSVLAGR--DGKSAKAIVAAARVVAQSMRRAAADARAVAEMKFRNAVFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 229
           ALE+LAYLVLQEKD+NGY+K+NG+A  +    EEEE +LQ + VTAI +
Sbjct: 181 ALERLAYLVLQEKDRNGYAKTNGNAA-AGAVEEEEETELQGEVVTAILE 225

[Close]

BLAST of CsGy3G015425 vs. TAIR 10
Match: AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 8.8e-24
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 0


Query: 11  SNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPP 70
           +NS   C  CG S +  W++H VR +A+ R  CT+C+L+++ + FCP CF +Y+ S  PP
Sbjct: 20  ANSTERCDDCGSSDA--WVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYDSS--PP 79

Query: 71  SHHRVMCF--RCPSISHLSCVSFRFSSTFLCPLCSDPR-FVFFDGF-DSGGSLCQSESTV 130
           S  RV C    C S++H+ C       ++LCP C DP  F FF    D  GS        
Sbjct: 80  SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFFRPIVDENGS-------- 139

Query: 131 AFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLA 190
                + VD    +A + AA+++A SM +A + A+   + + K AA AKK+A  ALEQ+ 
Sbjct: 140 -----RFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRAREALEQVV 199

Query: 191 YLVLQEKDKNGYSKSNGDAVDSERKV 213
            L  +EK ++   K     VD + K+
Sbjct: 200 MLDAKEKARSVVPKLKEAPVDQKPKL 208

[Close]

BLAST of CsGy3G015425 vs. TAIR 10
Match: AT3G17460.1 (PHD finger family protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15
Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 30  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCV 89
           +H V     FRRLCT+C+LK     FC +CF++++++ PP +  R++C  CPS +HLSC 
Sbjct: 21  IHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RIICVNCPSSTHLSCS 80

Query: 90  SFRFS--------------STFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNVD 149
           +   S              S+F C  CS+P F FF          +S           + 
Sbjct: 81  TQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFP---------KSRVNEDVPDETPLT 140

Query: 150 AKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDK 203
            KS  A+VAA  +S  +M +A    +  A  KI  A  AK +A  AL  L  +V+++   
Sbjct: 141 PKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTNLQDIVIRQSKV 196

The following BLAST results are available for this feature:

BLAST of CsGy3G015425 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G015425 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650412.1	8.61e-161	100.00	hypothetical protein Csa_010702 [Cucumis sativus]	[more]
XP_004147629.1	1.50e-154	100.00	uncharacterized protein LOC101204799 [Cucumis sativus]	[more]
KAA0052154.1	4.55e-149	95.22	DNA binding protein [Cucumis melo var. makuwa] >TYK05119.1 DNA binding protein [...	[more]
XP_016899011.1	8.50e-145	93.01	PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo]	[more]
ADN34038.1	7.24e-143	95.07	DNA binding protein [Cucumis melo subsp. melo]	[more]

BLAST of CsGy3G015425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5G4	4.38e-160	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1	[more]
A0A5A7U9X0	2.20e-149	95.22	DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769...	[more]
A0A1S4DSP5	4.12e-145	93.01	uncharacterized protein LOC103483924 OS=Cucumis melo OX=3656 GN=LOC103483924 PE=...	[more]
E5GC39	3.51e-143	95.07	DNA binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1IXP5	1.65e-113	77.29	uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468...	[more]

BLAST of CsGy3G015425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09520.1	8.8e-24	35.44	LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12...	[more]
AT3G17460.1	3.4e-15	31.55	PHD finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34451	PHD FINGER FAMILY PROTEIN	coord: 1..225
None	No IPR available	PANTHER	PTHR34451:SF7	PHD FINGER FAMILY PROTEIN	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G015425.1	CsGy3G015425.1	mRNA