CsGy3G015300 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G015300
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description30S ribosomal protein S1
LocationGy14Chr3: 11271117 .. 11275734 (+)
RNA-Seq ExpressionCsGy3G015300
SyntenyCsGy3G015300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATATTGTGGATGGAAATATTGGGGGAGATAAAAAGGTTAATGCTATATTGAATTCGATGATAGTAAAATACAATAACAGAAAGAGTGGGTAAGATTATATATTTGCGAAAAGCTATCTTCACTACCTTATCCAACCCAAACACCACATCAACTGTCGGAAGAAGGGAGATGGCTTCCATGGCTCAGCAATTTACTGGGTTGCGATGTGCTCCTCTTTCTTCATCGCGTCTCTCCAAGCCATTTTCTTCTAAGCATTTTCTGAACAAATCCCGTTCGCTTCCTGTTCAAGCTGCAGTCATTTCGGGCCCTATTCCCAGTCCTCAGACCAGGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAGGAGGCTTATGAACGTTGCCGTAATGCCCCTGTAGAAGGCATATCTTTCACTCTCGAGGACTTCCATGCCGCTCTTGAAAAATACGACTTCGATTCTGAATTGGGAACTAAGGTTATTTCTGGGTTGTCGTTTTTTTTTTCCTTTTCAATTGTGTATTTTTGTGGGGGCGTTTAGTTGATTATACTGGATGGGATGTCGTGAAGTTTAAAGGGTTGTTGGTTTGATGTTTGGGAATTGGGATTTTTTTATTTATTTTTTAATAGTGGTGGGTTTTAGTTTGTTTATGTAGTTCGATGATTTTTCTTGTTAATTACATTGGATTCTGGATTCTGTAACGTTGAATGTTTTGCTTATTTGATGTTATGGGAATTGGGAAGTAACAGCAATGAGATGCTTGAGGTGCATTTGAAGGAGATTGGGTTGTAATTTATGCAGTGTCTCTTTTCAGGTGAAAGGTACTGTGTTTTGTACGGATAATAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATATTTGCCATTGCAAGAGGCTTGCATTCACAGAATCAAGCATGTAGAAGAAGCAGGAGTATTTCCTGGCTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAATCTGATGATAGCTTGATTTTGAGCTTGAGATCCATTCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGACGTTGTTGTCAAGGGTAAGGTGGGTATTTCTACTCCAATTTTTGGTGCTTTTGTTTGTATACGTCGTCTGAAATGTGGGTGTGAGATCGTTGTCTAGTTGGGTAATAGGAAACTAAGATGTGTTATAGCATTTGCAGCATCATTTACCGAGAGGGGGATGGTTGTTCTATGCCATTTATCACTTGTTGTGCTTTTTTTATACTCGTGTGTTTTTCCATAGGTCATTCATTTTAAATAACCACGAGACTCAAAGGCTTAAGGTTATGATTTCTTGTGAATGTTGTTCTATGCTTGTTATCGTTTGTTGTGCTTTTGTCGTACTCATGTTTTTTTTCCATAGGTCATTCATTTTAAATAACCACTAGACCCAAAGGCTTAAGGTTATGATTTATTATAAATTTAATTTGTGGAGTTGGACATTTGCGCAAGGCTCAATAAGTGATTACGAATTAAGACTAGAAAATGGCATTTCGCAATGCCATACTAAATCACCCTTAAATATTAAAAAAAAGAAAGGTGCTAGGTTACTGTAAATTTTATATTGTATTAGTACTTAACAATTCATATGTGGCCATTTCTTCTGTGTTCAATGTTCAGGTGGTCGATGCTAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTTGTCCCTTTCTCACAGATATCAACGGTAATTTCTCGTAGCTATTGAGGACACTCACATTTTGAGAGTTCTTCTGGTTTTACTTATATATAATATATAACATACTATAGTTACTGCTGGAGTAAAGCTTATTAGTTTCTCACAATTGTTAATCAATGAATGGTTGGTTGTACGTGGTGTTATTTGCAAAGGTCATGCTGATTTTCCACTTCCTTCCCCCACAATTATCAATTGGATACATTGGTACTATTTTAGTTTTGTTGATGTTAGTTATATACTGCTGATTAACGCCATGCCTGTTTTGTCTTTTTATCCCTGCAATGTTTCAGAAATCAAATGCTGAAGAGCTTCTCAGCAAGGAGCTTCCTCTAAAGTTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAACTTGGAATTGGATCAGTGGTCACCGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGATATTGGTGGAATCAATGGTCTTCTTCATGTTAGTCAAATCAGTCATGACCGGATATCGGATATTGCAACAGTCCTTCAGCCTGGGGACTCTCTCAAGGTAATTTAATGCCTTTCAAGTGATTTTAAGGTGCTTCTTACTCTCATGATTTCAAGTTTTACAATGAGCTCTTTTGGCATAGGTCATGATATTGAGCCACGATCGTGAGAGAGGCCGAGTTAGTCTCTCTACCAAGAAGTTAGAGCCCACTCCTGGGGACATGATTCGCAATCCAAAGCTTGTTTTTGAGAAGGTATCCTCTTTGCTAGCTAGAGTTATCTATTTCTGTTATTTTTGTACCGATGCTGCTTTTTCTTGTTATACGTGGATTTACTTGCACAGGCTAACGTGCTTTGGTCTTTCAGCTACAATGCTACAATTTCATTTCATTAGTTAAAGTGCAAATTTTAATATGGCCAAGGTTTTGTGCTTGCTAGGGTAGCAGAAACTGCTGACTAATTGCTATTTCACCTTCACCTTAGCATGTCTTTTTTTTTTGTTTTCAGATTTTTAAAACTACGATTATATCAAACTCTTTCTTATAGACTTTTGGTGGTTATCCCTTGAATGTTTTTTTTCTTTATATTTGTAAGTGTTCCGACCAGTTTACACGCCCCTCAACTAATCTCATAGGACAACCCATCTGACCTAAAATCTAGAGTCATGTGGAGGGAGTAATGCTTAAAACCTCTGCTTTGCTGGTAAATTTGGATATGGATAGTAGTAAATATTTTGAAAATAGAAAGTAATCTTAGAGTTTCTGATCCTTTGTTTTGGGAAGTCTATTGTTAGAGCGCACTTGATAGTTGATAGGAATATTTGCAATCATTACTTGAAGGCCTATATGTAAACTCATGTACTTTCAGTTGGGGTTATATTTCTTTTTTCTAGATTCTTGTTTTCGATTACAGAGTTCATTTCCTATCAAATAGTGAAAAAAGGAGGAAGAAGCAAAATAGCAAGAGATATAATTGTAACTTTGATCTTTTTTCCATCTGCAGGCTGAGGAGATGGCACAAACGTTCAGGCAAAGAATAGCCCAGGCAGAGGCATTGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGGTACTGTACAGCCATCTATCCTTGAGATTTCTAAACTGTACCTTGAGAATAAATAAAAAGTTAATGATAAATGCAATTAAATGGTATGTGTCGGAGTTCTAAACCATAAAGTGGAAAGTACATCGAGTCATTCACTTTGTGGTAGTATAATTGAGTACATGGTTTTACAGTTAGTACTGGCTTCGTGACTGAGGATGTATTCTTTATATTGGCTCACCATCCTGCTTTAGCTTAAACTCTCTCTATTAACCAACTTGATAAACAATCTACATCAATGCTCAGTAGGGTATTGTGTTGAATGTTCATATATTTTTTGTGTTGATATCCAATGGTTTATGAGAATTCTCGTAGGATAGTGTTGGACATTCCTATGGTTTAAAAGTGTATTGGGTATAAATTTTGGACTAACCGTATGTCTTTTTTATTAGAAATTAGAAATGTTTCTAACTAATTAAGAATACCTTTCCCTGTGGAGTACCATCAAAAGCATTTTAAAGTGCGTTTAAAAGAAACAGTTGTTTTTAACGATGGTTGAAAATGCTTATAGAAGTAGTCACTCACATGAAAGTCTCTCTAGTGTCATTGAAACACATTCCAAGTCCTCACTAACGATATCATATGAATAAGTTTTTCCAATCATCTGTTGTCGTCTTGTGTTTCTCTCTACATCATAATATCTATATATGTTGGATTTGAAATTAAATGGTTACTTGTTTTAACCATACAGAGTGGTTTGACTTTGACTACTGATGGAATATTGGGACCAATTACTCCAGAGTTACCTGTAGAGGGTTTAGATTTGAATGATGTACCTCCAGCTGAAGAGTGAAGATTCTTTCCCACCGTTGTATTCTGTACAATGTTTCACTTTGTATACAAACTTCTGCCATTGTAATTGGGTACGCAACTTCGTCCTTTCTGTCATAGCTTAGTGTTGAATGGTTGATGAAAGCCCATTTGCTAGTTTATTTTCGTTCTCTATTCTTTTCTTTCATTTTTATTTTAAGGAAACACAACTTTTCATTGATAAAATTAAGAGAGACTATCCTTCAAAATACAAGGACACAAAAAGAAGAGACACAAACTTTAAACGATATAGTCCCAAGAATACCATGAACTAAACCGACAAGGTGGCCCCTCTCAATTGTAGATTCGTTTGTTAGTCTGTTCACAAACGACTTTGAAATTTTTTGCTTCTTTTCCTGTCATGGACCATATTTGATTTTCAAAACAACACTTTTCTTCTTCAATATTAAGGCTG

mRNA sequence

AGATATTGTGGATGGAAATATTGGGGGAGATAAAAAGGTTAATGCTATATTGAATTCGATGATAGTAAAATACAATAACAGAAAGAGTGGGTAAGATTATATATTTGCGAAAAGCTATCTTCACTACCTTATCCAACCCAAACACCACATCAACTGTCGGAAGAAGGGAGATGGCTTCCATGGCTCAGCAATTTACTGGGTTGCGATGTGCTCCTCTTTCTTCATCGCGTCTCTCCAAGCCATTTTCTTCTAAGCATTTTCTGAACAAATCCCGTTCGCTTCCTGTTCAAGCTGCAGTCATTTCGGGCCCTATTCCCAGTCCTCAGACCAGGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAGGAGGCTTATGAACGTTGCCGTAATGCCCCTGTAGAAGGCATATCTTTCACTCTCGAGGACTTCCATGCCGCTCTTGAAAAATACGACTTCGATTCTGAATTGGGAACTAAGGTGAAAGGTACTGTGTTTTGTACGGATAATAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATATTTGCCATTGCAAGAGGCTTGCATTCACAGAATCAAGCATGTAGAAGAAGCAGGAGTATTTCCTGGCTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAATCTGATGATAGCTTGATTTTGAGCTTGAGATCCATTCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGACGTTGTTGTCAAGGGTAAGGTGGTCGATGCTAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTTGTCCCTTTCTCACAGATATCAACGAAATCAAATGCTGAAGAGCTTCTCAGCAAGGAGCTTCCTCTAAAGTTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAACTTGGAATTGGATCAGTGGTCACCGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGATATTGGTGGAATCAATGGTCTTCTTCATGTTAGTCAAATCAGTCATGACCGGATATCGGATATTGCAACAGTCCTTCAGCCTGGGGACTCTCTCAAGGTCATGATATTGAGCCACGATCGTGAGAGAGGCCGAGTTAGTCTCTCTACCAAGAAGTTAGAGCCCACTCCTGGGGACATGATTCGCAATCCAAAGCTTGTTTTTGAGAAGGCTGAGGAGATGGCACAAACGTTCAGGCAAAGAATAGCCCAGGCAGAGGCATTGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGAGTGGTTTGACTTTGACTACTGATGGAATATTGGGACCAATTACTCCAGAGTTACCTGTAGAGGGTTTAGATTTGAATGATGTACCTCCAGCTGAAGAGTGAAGATTCTTTCCCACCGTTGTATTCTGTACAATGTTTCACTTTGTATACAAACTTCTGCCATTGTAATTGGGTACGCAACTTCGTCCTTTCTGTCATAGCTTAGTGTTGAATGGTTGATGAAAGCCCATTTGCTAGTTTATTTTCGTTCTCTATTCTTTTCTTTCATTTTTATTTTAAGGAAACACAACTTTTCATTGATAAAATTAAGAGAGACTATCCTTCAAAATACAAGGACACAAAAAGAAGAGACACAAACTTTAAACGATATAGTCCCAAGAATACCATGAACTAAACCGACAAGGTGGCCCCTCTCAATTGTAGATTCGTTTGTTAGTCTGTTCACAAACGACTTTGAAATTTTTTGCTTCTTTTCCTGTCATGGACCATATTTGATTTTCAAAACAACACTTTTCTTCTTCAATATTAAGGCTG

Coding sequence (CDS)

ATGGCTTCCATGGCTCAGCAATTTACTGGGTTGCGATGTGCTCCTCTTTCTTCATCGCGTCTCTCCAAGCCATTTTCTTCTAAGCATTTTCTGAACAAATCCCGTTCGCTTCCTGTTCAAGCTGCAGTCATTTCGGGCCCTATTCCCAGTCCTCAGACCAGGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAGGAGGCTTATGAACGTTGCCGTAATGCCCCTGTAGAAGGCATATCTTTCACTCTCGAGGACTTCCATGCCGCTCTTGAAAAATACGACTTCGATTCTGAATTGGGAACTAAGGTGAAAGGTACTGTGTTTTGTACGGATAATAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATATTTGCCATTGCAAGAGGCTTGCATTCACAGAATCAAGCATGTAGAAGAAGCAGGAGTATTTCCTGGCTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAATCTGATGATAGCTTGATTTTGAGCTTGAGATCCATTCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGACGTTGTTGTCAAGGGTAAGGTGGTCGATGCTAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTTGTCCCTTTCTCACAGATATCAACGAAATCAAATGCTGAAGAGCTTCTCAGCAAGGAGCTTCCTCTAAAGTTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAACTTGGAATTGGATCAGTGGTCACCGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGATATTGGTGGAATCAATGGTCTTCTTCATGTTAGTCAAATCAGTCATGACCGGATATCGGATATTGCAACAGTCCTTCAGCCTGGGGACTCTCTCAAGGTCATGATATTGAGCCACGATCGTGAGAGAGGCCGAGTTAGTCTCTCTACCAAGAAGTTAGAGCCCACTCCTGGGGACATGATTCGCAATCCAAAGCTTGTTTTTGAGAAGGCTGAGGAGATGGCACAAACGTTCAGGCAAAGAATAGCCCAGGCAGAGGCATTGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGAGTGGTTTGACTTTGACTACTGATGGAATATTGGGACCAATTACTCCAGAGTTACCTGTAGAGGGTTTAGATTTGAATGATGTACCTCCAGCTGAAGAGTGA

Protein sequence

MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE*
Homology
[Close]
BLAST of CsGy3G015300 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 2.3e-192
Identity = 346/414 (83.57%), Postives = 384/414 (92.75%), Query Frame = 0 

Query: 1   MASMAQQFT-GLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKL 60
           MAS+AQQ   GLRC PLS+S LSKPFS KH L K R  P+ +AV    + + QTRER KL
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTL-KPRFSPIVSAV---AVSNAQTRERQKL 60

Query: 61  KEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDIT 120
           K++FE+AYERCRNAP+EG+SFT++DFH AL+KYDF+SE+G++VKGTVFCTD NGALVDIT
Sbjct: 61  KQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDIT 120

Query: 121 AKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWER 180
           AKSSAYLPL EACI+RIK+VEEAG+ PG+REEFVIIGENE+DDSLILSLR IQY+LAWER
Sbjct: 121 AKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWER 180

Query: 181 CRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEV 240
           CRQLQAEDVVVKGK+V ANKGGVVA+VEGLRGFVPFSQIS+KS+AEELL KE+PLKFVEV
Sbjct: 181 CRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEV 240

Query: 241 DEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300
           DEEQSRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 241 DEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300

Query: 301 ISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360
           +SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF
Sbjct: 301 VSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360

Query: 361 RQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 414
           RQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+T +LP EGLDL+ VPPA E
Sbjct: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVE 410

[Close]
BLAST of CsGy3G015300 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 3.2e-178
Identity = 323/415 (77.83%), Postives = 377/415 (90.84%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPL-SSSRLSKPFSSKHFLNKSRSL-PVQAAVISGPIPSPQTRERFK 60
           MAS+AQQF+GLRC+PL SSSRLS+  S     NKS S+ P   A ++  + S QT+ER +
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERLE 60

Query: 61  LKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDI 120
           LK++FE+AYERCR +P+EG++FT++DF AA+E+YDF+SE+GT+VKGTVF TD NGALVDI
Sbjct: 61  LKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDI 120

Query: 121 TAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWE 180
           +AKSSAYL +++ACIHRIKHVEEAG+ PG+ EEFVIIGENESDDSL+LSLR+IQY+LAWE
Sbjct: 121 SAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWE 180

Query: 181 RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVE 240
           RCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVE
Sbjct: 181 RCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVE 240

Query: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD 300
           VDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHD
Sbjct: 241 VDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHD 300

Query: 301 RISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360
           R+SDIATVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
Sbjct: 301 RVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360

Query: 361 FRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL--NDVPPA 412
           FRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+  ELP +G+DL  +D+P A
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]
BLAST of CsGy3G015300 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 301.6 bits (771), Expect = 1.4e-80
Identity = 157/301 (52.16%), Postives = 216/301 (71.76%), Query Frame = 0 

Query: 71  RNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQE 130
           ++ P   I FT EDF A L++YD+    G  V GTVF  +  GAL+DI AK++A+LP+QE
Sbjct: 4   QDIPAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQE 63

Query: 131 ACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVV 190
             I+R++  EE      +RE F++  ENE D  L LS+R I+Y  AWER RQLQ ED  V
Sbjct: 64  MSINRVESPEEVLQPSEMREFFILSDENE-DGQLTLSIRRIEYMRAWERVRQLQTEDATV 123

Query: 191 KGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSN 250
           + +V   N+GG +  +EGLRGF+P S IST+   E+L+ +ELPLKF+EVDE+++RLVLS+
Sbjct: 124 RSEVFATNRGGALVRIEGLRGFIPGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSH 183

Query: 251 RKAMADSQA-QLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQP 310
           R+A+ + +  +L +G VV G V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V   
Sbjct: 184 RRALVERKMNRLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNV 243

Query: 311 GDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI-AQAEA 370
            D +KVMI+  D ERGR+SLSTK+LEP PGDM+RNP++V+EKAEEMA  +R+++  QAE 
Sbjct: 244 NDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKLKQQAEG 303

[Close]
BLAST of CsGy3G015300 vs. ExPASy Swiss-Prot
Match: P73530 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1A PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.2e-77
Identity = 154/312 (49.36%), Postives = 212/312 (67.95%), Query Frame = 0 

Query: 78  ISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIK 137
           I FTLEDF A L+KYD+    G  V GTVF  ++ GAL+DI AK++AY+P+QE  I+R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 138 HVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDA 197
             EE  + P    EF I+ +   D  L LS+R I+Y  AWER RQLQAED  V+  V   
Sbjct: 70  DPEEV-LQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFAT 129

Query: 198 NKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADS 257
           N+GG +  +EGLRGF+P S IS +   E+L+ ++LPLKF+EVDEE++RLVLS+R+A+ + 
Sbjct: 130 NRGGALVRIEGLRGFIPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVER 189

Query: 258 QAQ-LGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVM 317
           +   L +  VV G+V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V    D +KVM
Sbjct: 190 KMNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVM 249

Query: 318 ILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLR 377
           I+  D ERGR+SLSTK+LEP PG M+++  LV E A+EMA+ FRQ+      LA A  + 
Sbjct: 250 IIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQK-----RLAEAQGIP 309

Query: 378 FQPESGLTLTTD 389
           ++P + +  T D
Sbjct: 310 YEPPTSVDDTDD 315

[Close]
BLAST of CsGy3G015300 vs. ExPASy Swiss-Prot
Match: O33698 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsA PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.4e-46
Identity = 100/282 (35.46%), Postives = 167/282 (59.22%), Query Frame = 0 

Query: 83  EDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEA 142
           +DF  ALE    DS+ G  V+G V     +GA +DI  K+ A+LP +EA +H +  + EA
Sbjct: 12  DDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDL-EA 71

Query: 143 GVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGV 202
            +      EF++I +   D  + +SLR++  + AW R  +LQ     V+ KV  +NKGGV
Sbjct: 72  HLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGV 131

Query: 203 VAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QL 262
            A +EGLR F+P S ++ K + + L  K L + F+EV+    +LVLS R+A   +   ++
Sbjct: 132 TADLEGLRAFIPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREI 191

Query: 263 GIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHD 322
            +G ++ G V  LKP+G F+D+GG   LL ++QIS   ++D+  + + GD ++ ++++ D
Sbjct: 192 EVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAID 251

Query: 323 RERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 364
             +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Sbjct: 252 NTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]
BLAST of CsGy3G015300 vs. NCBI nr
Match: XP_004147619.1 (30S ribosomal protein S1, chloroplastic [Cucumis sativus] >KAE8650407.1 hypothetical protein Csa_009967 [Cucumis sativus])

HSP 1 Score: 796 bits (2057), Expect = 2.75e-290
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. NCBI nr
Match: XP_008438974.1 (PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo])

HSP 1 Score: 786 bits (2031), Expect = 2.53e-286
Identity = 406/413 (98.31%), Postives = 410/413 (99.27%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. NCBI nr
Match: XP_038878013.1 (30S ribosomal protein S1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 773 bits (1995), Expect = 7.74e-281
Identity = 396/413 (95.88%), Postives = 408/413 (98.79%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSS+H  +K+RSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSRHLQSKARSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGI+FTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGIAFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVIIGENE+DDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENEADDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDI TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIGTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. NCBI nr
Match: KAA0052175.1 (30S ribosomal protein S1 [Cucumis melo var. makuwa] >TYK05147.1 30S ribosomal protein S1 [Cucumis melo var. makuwa])

HSP 1 Score: 773 bits (1995), Expect = 1.98e-280
Identity = 406/438 (92.69%), Postives = 410/438 (93.61%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV------------------ 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV                  
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 -------KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVII 180
                  KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300
           SQISTKS AEELL+KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 413
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]
BLAST of CsGy3G015300 vs. NCBI nr
Match: XP_022138241.1 (30S ribosomal protein S1, chloroplastic [Momordica charantia])

HSP 1 Score: 762 bits (1967), Expect = 1.43e-276
Identity = 390/413 (94.43%), Postives = 405/413 (98.06%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLS PFS +H  NK+RSLPV AAVIS PIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPG+REEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL+DVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. ExPASy TrEMBL
Match: A0A1S3AXL6 (30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 PE=4 SV=1)

HSP 1 Score: 786 bits (2031), Expect = 1.22e-286
Identity = 406/413 (98.31%), Postives = 410/413 (99.27%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. ExPASy TrEMBL
Match: A0A5A7UEP7 (30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00520 PE=4 SV=1)

HSP 1 Score: 773 bits (1995), Expect = 9.60e-281
Identity = 406/438 (92.69%), Postives = 410/438 (93.61%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV------------------ 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV                  
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 -------KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVII 180
                  KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300
           SQISTKS AEELL+KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 413
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]
BLAST of CsGy3G015300 vs. ExPASy TrEMBL
Match: A0A6J1C966 (30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009464 PE=4 SV=1)

HSP 1 Score: 762 bits (1967), Expect = 6.93e-277
Identity = 390/413 (94.43%), Postives = 405/413 (98.06%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLS PFS +H  NK+RSLPV AAVIS PIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPG+REEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL+DVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. ExPASy TrEMBL
Match: A0A0A0L5E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168960 PE=4 SV=1)

HSP 1 Score: 754 bits (1946), Expect = 9.44e-274
Identity = 394/413 (95.40%), Postives = 398/413 (96.37%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIST       L  +L + ++E  
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTVMLIFHFLPPQLSIGYIE-- 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
             QSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 --QSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 409

[Close]
BLAST of CsGy3G015300 vs. ExPASy TrEMBL
Match: A0A6J1F6H4 (30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442576 PE=4 SV=1)

HSP 1 Score: 750 bits (1937), Expect = 2.58e-272
Identity = 380/413 (92.01%), Postives = 403/413 (97.58%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQF GLRCAPLSSSRLSKPFSS+H  N++RSLPVQAAVI+ PIPSPQ +ERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           E+FEEAYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG++PGLR+EFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIA AEA+ARADML+FQPESGLTLTTDGILGP+TPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]
BLAST of CsGy3G015300 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 625.9 bits (1613), Expect = 2.3e-179
Identity = 323/415 (77.83%), Postives = 377/415 (90.84%), Query Frame = 0 

Query: 1   MASMAQQFTGLRCAPL-SSSRLSKPFSSKHFLNKSRSL-PVQAAVISGPIPSPQTRERFK 60
           MAS+AQQF+GLRC+PL SSSRLS+  S     NKS S+ P   A ++  + S QT+ER +
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERLE 60

Query: 61  LKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDI 120
           LK++FE+AYERCR +P+EG++FT++DF AA+E+YDF+SE+GT+VKGTVF TD NGALVDI
Sbjct: 61  LKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDI 120

Query: 121 TAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWE 180
           +AKSSAYL +++ACIHRIKHVEEAG+ PG+ EEFVIIGENESDDSL+LSLR+IQY+LAWE
Sbjct: 121 SAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWE 180

Query: 181 RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVE 240
           RCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVE
Sbjct: 181 RCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVE 240

Query: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD 300
           VDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHD
Sbjct: 241 VDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHD 300

Query: 301 RISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360
           R+SDIATVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
Sbjct: 301 RVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360

Query: 361 FRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL--NDVPPA 412
           FRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+  ELP +G+DL  +D+P A
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]
BLAST of CsGy3G015300 vs. TAIR 10
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 106.7 bits (265), Expect = 4.6e-23
Identity = 66/205 (32.20%), Postives = 121/205 (59.02%), Query Frame = 0 

Query: 165 ILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNA 224
           +LS R     +AW R RQ++  +  ++ K+ + N GG++  +EGLR F+P  ++  K N 
Sbjct: 261 LLSSRRYFRRIAWHRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNT 320

Query: 225 ----EELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAF 284
               +E + +   ++   ++E+++ L+LS +  +A  +  L  G+++ GTV  + PYGA 
Sbjct: 321 FTELKENVGRRFLVQITRLNEDKNDLILSEK--VAWEKLYLREGTLLEGTVVKILPYGAQ 380

Query: 285 IDIG--GINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTP 344
           + +G    +GLLH+S I+  RI  ++ VLQ  +S+KV+++       ++SLS   LE  P
Sbjct: 381 VKLGDSSRSGLLHISNITRRRIGSVSDVLQVDESVKVLVVK-SLFPDKISLSIADLESEP 440

Query: 345 GDMIRNPKLVFEKAEEMAQTFRQRI 364
           G  I + + VF +AEEMA+ +R+++
Sbjct: 441 GLFISDREKVFTEAEEMAKKYREKM 462

[Close]
BLAST of CsGy3G015300 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-21
Identity = 58/180 (32.22%), Postives = 100/180 (55.56%), Query Frame = 0 

Query: 177 WERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEE---------- 236
           W+  +         +G+V   N GG++     L GF+P+ Q+S   + +E          
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156

Query: 237 -LLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQSLKPYGAFIDIG 296
            L+  +LP+K V+ DEE  +L+LS + A+    +Q + +G V  G V S++ YGAFI + 
Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216

Query: 297 ------GINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTP 339
                  + GL+HVS++S D + D+  VL+ GD ++V++ + D+E+ R++LS K+LE  P
Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 276

[Close]
BLAST of CsGy3G015300 vs. TAIR 10
Match: AT5G14580.1 (polyribonucleotide nucleotidyltransferase, putative )

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-11
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 0 

Query: 237 VEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVTGTVQSLKPYGAFIDI-GGIN 296
           + +D     +V  N+  M  +Q Q        L +G V  GTV S+K YGAF++  GG  
Sbjct: 643 LSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQ 702

Query: 297 GLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTP 339
           GLLH+S++SH+ +S ++ VL  G  +  M +  D  RG + LS K L P P
Sbjct: 703 GLLHMSELSHEPVSKVSDVLDIGQCITTMCIETD-VRGNIKLSRKALLPKP 752

[Close]
BLAST of CsGy3G015300 vs. TAIR 10
Match: AT3G11964.1 (RNA binding;RNA binding )

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-10
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 0 

Query: 260  QLGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDSLKVMI 319
            +L +G +++G ++ ++P+G FIDI   G+ GL H+SQ+S DR+ ++    + G+S++  I
Sbjct: 1431 KLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKI 1490

Query: 320  LSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRF 379
            L  D E+ R+SL  K      GD  +   L  +              ++E LA  D   F
Sbjct: 1491 LKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPIND--PKSEVLAAVDDFGF 1550

Query: 380  QPESGLTLTTDGILGPI--TPELPVEGLDLNDV 409
            Q  SG    T  +L  +     +P   +DL+D+
Sbjct: 1551 QETSG---GTSLVLAQVESRASIPPLEVDLDDI 1578

The following BLAST results are available for this feature:
BLAST of CsGy3G015300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P293442.3e-19283.5730S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=... [more]
Q93VC73.2e-17877.8330S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ... [more]
P462281.4e-8052.1630S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA... [more]
P735303.2e-7749.3630S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus... [more]
O336988.4e-4635.4630S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805... [more]
BLAST of CsGy3G015300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147619.12.75e-290100.0030S ribosomal protein S1, chloroplastic [Cucumis sativus] >KAE8650407.1 hypothet... [more]
XP_008438974.12.53e-28698.31PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo][more]
XP_038878013.17.74e-28195.8830S ribosomal protein S1, chloroplastic-like [Benincasa hispida][more]
KAA0052175.11.98e-28092.6930S ribosomal protein S1 [Cucumis melo var. makuwa] >TYK05147.1 30S ribosomal pr... [more]
XP_022138241.11.43e-27694.4330S ribosomal protein S1, chloroplastic [Momordica charantia][more]
BLAST of CsGy3G015300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AXL61.22e-28698.3130S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 ... [more]
A0A5A7UEP79.60e-28192.6930S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1C9666.93e-27794.4330S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A0A0L5E79.44e-27495.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168960 PE=4 SV=1[more]
A0A6J1F6H42.58e-27292.0130S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
BLAST of CsGy3G015300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G30510.12.3e-17977.83ribosomal protein S1 [more]
AT1G71720.14.6e-2332.20Nucleic acid-binding proteins superfamily [more]
AT3G23700.13.3e-2132.22Nucleic acid-binding proteins superfamily [more]
AT5G14580.11.4e-1136.94polyribonucleotide nucleotidyltransferase, putative [more]
AT3G11964.12.0e-1029.41RNA binding;RNA binding [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 349..369
NoneNo IPR availableGENE3D2.40.50.140coord: 82..179
e-value: 2.3E-9
score: 38.9
NoneNo IPR availableGENE3D2.40.50.140coord: 258..336
e-value: 4.3E-23
score: 83.0
NoneNo IPR availableGENE3D2.40.50.140coord: 180..257
e-value: 1.1E-7
score: 33.8
NoneNo IPR availablePANTHERPTHR10724:SF1130S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 1..413
NoneNo IPR availablePANTHERPTHR1072430S RIBOSOMAL PROTEIN S1coord: 1..413
NoneNo IPR availableCDDcd05692S1_RPS1_repeat_hs4coord: 264..332
e-value: 9.72722E-32
score: 113.534
NoneNo IPR availableCDDcd05687S1_RPS1_repeat_ec1_hs1coord: 99..169
e-value: 1.74055E-13
score: 63.3171
NoneNo IPR availableCDDcd04465S1_RPS1_repeat_ec2_hs2coord: 198..251
e-value: 2.40993E-17
score: 74.0323
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 185..251
e-value: 9.0E-7
score: 38.5
coord: 97..169
e-value: 1.0E-6
score: 38.3
coord: 262..332
e-value: 3.1E-25
score: 99.8
IPR003029S1 domainPFAMPF00575S1coord: 263..332
e-value: 1.4E-17
score: 63.7
coord: 185..249
e-value: 3.4E-8
score: 33.7
IPR003029S1 domainPROSITEPS50126S1coord: 264..332
score: 22.270998
IPR003029S1 domainPROSITEPS50126S1coord: 187..251
score: 14.531479
IPR003029S1 domainPROSITEPS50126S1coord: 99..169
score: 12.619099
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 263..342
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 94..195
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 182..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G015300.2CsGy3G015300.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding