CsGy3G014300 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G014300
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGlycosyltransferase
LocationGy14Chr3: 10604203 .. 10604693 (+)
RNA-Seq ExpressionCsGy3G014300
SyntenyCsGy3G014300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAGCGGCATTAGAGGTTTTGGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAATGTCATCGTCCACGACTTTCTCTGTCATATTTTAAAGAAGGTATCGTTCAGCTCCATCAAACCTAATTGCCGACTAACATCGCATAAGCAAATGGTGAAGATGGTTGGTCGATTTTTCAAAATCTGTCTATTTTAGAAACTTGCAGGTTGTTACTGTAGCTAAAATTGAGCAATAATTTAAAATTTTTGGTAGATTTCTACCTAATGATGTGTATTTATTAGGTCTCGGAGGCCCTCACTTTTGATTATTTGTTTGGATTGGCTCACATGGATGGTTCTTGATGCATTTGTTGGTGGTGCCATGAATAGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAGGGGACGGTTTGGTTCTCATAGTTTGGGTCGATGAAGCAGCCAAAATGGAAGCAACTATGGTCAGTTGA

mRNA sequence

ATGTTTAGCGGCATTAGAGGTTTTGGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAATGTCATCGTCCACGACTTTCTCTGTCATATTTTAAAGAAGGTATCGTTCAGCTCCATCAAACCTAATTGCCGACTAACATCGCATAAGCAAATGGTGAAGATGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAGGGGACGGTTTGGTTCTCATAGTTTGGGTCGATGAAGCAGCCAAAATGGAAGCAACTATGGTCAGTTGA

Coding sequence (CDS)

ATGTTTAGCGGCATTAGAGGTTTTGGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAATGTCATCGTCCACGACTTTCTCTGTCATATTTTAAAGAAGGTATCGTTCAGCTCCATCAAACCTAATTGCCGACTAACATCGCATAAGCAAATGGTGAAGATGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAGGGGACGGTTTGGTTCTCATAGTTTGGGTCGATGAAGCAGCCAAAATGGAAGCAACTATGGTCAGTTGA

Protein sequence

MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEGKEGEVVTSQMLLGDGLVLIVWVDEAAKMEATMVS*
Homology
[Close]
BLAST of CsGy3G014300 vs. NCBI nr
Match: KAE8650384.1 (hypothetical protein Csa_010361 [Cucumis sativus])

HSP 1 Score: 189 bits (479), Expect = 1.87e-59
Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1   MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEG 60
           MFS I GFGLACYVSLWLNLPHWNV+ HDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEG
Sbjct: 63  MFSDIGGFGLACYVSLWLNLPHWNVVAHDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEG 122

Query: 61  KEGEVVTSQMLLGDGLVLIVWVDEAAKMEATMVS 94
           KEGEVVTSQMLLGDGLVLIVWVDEAAKMEATMVS
Sbjct: 123 KEGEVVTSQMLLGDGLVLIVWVDEAAKMEATMVS 156

[Close]
BLAST of CsGy3G014300 vs. NCBI nr
Match: KAE8652785.1 (hypothetical protein Csa_022736, partial [Cucumis sativus])

HSP 1 Score: 171 bits (434), Expect = 2.75e-53
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 0 

Query: 1   MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEG 60
           MFSGI GFGLACYVSLWLNLPH NV+ HDFLCHILKKVSFSSI+PNCRLTS KQMVKMEG
Sbjct: 14  MFSGIGGFGLACYVSLWLNLPHRNVVAHDFLCHILKKVSFSSIRPNCRLTSQKQMVKMEG 73

Query: 61  KEGEVVTSQMLLGDGLVLIVWVDEAAK-MEATM 92
           KEGEVVTSQMLLGD LVLIVWVDEAAK MEATM
Sbjct: 74  KEGEVVTSQMLLGDDLVLIVWVDEAAKNMEATM 106

[Close]
BLAST of CsGy3G014300 vs. NCBI nr
Match: KAE8650744.1 (hypothetical protein Csa_017593, partial [Cucumis sativus])

HSP 1 Score: 112 bits (281), Expect = 1.47e-30
Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 1  MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKM 58
          MFSGI GF LACYVSLWLNLPHWNV+ HDFLC ILKKVSFSSI+PNCRLTS KQMVKM
Sbjct: 1  MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58

[Close]
BLAST of CsGy3G014300 vs. NCBI nr
Match: KGN44263.2 (hypothetical protein Csa_015473, partial [Cucumis sativus])

HSP 1 Score: 107 bits (267), Expect = 2.01e-28
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0 

Query: 1  MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKM 58
          MFSGI GF LACYVSLWLNLPH NV+ HDFLC ILKKVSFSSI+PNCRLTS KQMVKM
Sbjct: 1  MFSGIGGFCLACYVSLWLNLPHRNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58

[Close]
BLAST of CsGy3G014300 vs. NCBI nr
Match: KAE8650740.1 (hypothetical protein Csa_023414, partial [Cucumis sativus])

HSP 1 Score: 106 bits (265), Expect = 4.05e-28
Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0 

Query: 1  MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKM 58
          MFSGI GF +ACYVSLWLNLPH NV+ HDFLC ILKKVSFSSI+PNCRLTS KQMVKM
Sbjct: 1  MFSGIGGFCVACYVSLWLNLPHQNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKM 58

[Close]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match: A0A0A0L7V2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152650 PE=4 SV=1)

HSP 1 Score: 112 bits (279), Expect = 8.78e-29
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1   MFSGIRGFGLACYVSLWLNLPHWNVIVHDFLCHILKKVSFSSIKPNCRLTSHKQMVKMEG 60
           MFS I GFGLACYVSLWLNLPH NV+ HDFLCHILKKVSFSSI+PNCRLTS KQMVKM  
Sbjct: 63  MFSDIGGFGLACYVSLWLNLPHRNVVAHDFLCHILKKVSFSSIRPNCRLTSRKQMVKMVS 122

Query: 61  KEGEVVTSQMLLG 73
              E +T   L G
Sbjct: 123 ---EALTFDYLFG 132

[Close]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match: A0A0A0LC60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608710 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.49e-10
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 7  GFGLACYVSLWLNLPHWNVIVHDFLCHILKKVS 39
          GFGLACYVSL LNLPH NV+ HDFLC ILKKVS
Sbjct: 3  GFGLACYVSLGLNLPHRNVVAHDFLCQILKKVS 35

[Close]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match: A0A5A7TH54 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00320 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.26e-07
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 1   MFSGIRGFGLACYVSLWLNLPHWNVIVHDF 30
           +FSG  GFGLACYVSLWLNLPH NV+ HDF
Sbjct: 146 IFSGTGGFGLACYVSLWLNLPHRNVVAHDF 175

[Close]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match: A0A5D3BC30 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001310 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.26e-07
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 1   MFSGIRGFGLACYVSLWLNLPHWNVIVHDF 30
           +FSG  GFGLACYVSLWLNLPH NV+ HDF
Sbjct: 146 IFSGTGGFGLACYVSLWLNLPHRNVVAHDF 175

[Close]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match: A0A1S3BMQ5 (Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103491535 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.26e-07
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 1   MFSGIRGFGLACYVSLWLNLPHWNVIVHDF 30
           +FSG  GFGLACYVSLWLNLPH NV+ HDF
Sbjct: 146 IFSGTGGFGLACYVSLWLNLPHRNVVAHDF 175

The following BLAST results are available for this feature:
BLAST of CsGy3G014300 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G014300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650384.11.87e-5995.74hypothetical protein Csa_010361 [Cucumis sativus][more]
KAE8652785.12.75e-5391.40hypothetical protein Csa_022736, partial [Cucumis sativus][more]
KAE8650744.11.47e-3087.93hypothetical protein Csa_017593, partial [Cucumis sativus][more]
KGN44263.22.01e-2886.21hypothetical protein Csa_015473, partial [Cucumis sativus][more]
KAE8650740.14.05e-2884.48hypothetical protein Csa_023414, partial [Cucumis sativus][more]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7V28.78e-2975.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152650 PE=4 SV=1[more]
A0A0A0LC603.49e-1084.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608710 PE=4 SV=1[more]
A0A5A7TH541.26e-0780.00Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G... [more]
A0A5D3BC301.26e-0780.00Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G... [more]
A0A1S3BMQ51.26e-0780.00Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103491535 PE=3 SV=1[more]
BLAST of CsGy3G014300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G014300.2CsGy3G014300.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0071555 cell wall organization
biological_process GO:0008360 regulation of cell shape
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity