CsGy3G014260 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G014260
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription termination factor MTEF1
Location	Gy14Chr3: 10593515 .. 10594774 (-)
RNA-Seq Expression	CsGy3G014260
Synteny	CsGy3G014260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCGGTCGCATGACCTCTCCGGTTCGCGCCGGTCATTTTCCTTCATAGCTTCATCCTCGTTTGAGGAATTTCTAGTTTCTCTAATTCTTCTTCTCTAGAAGGAGCCAACAGGTCAGTCTTCCTTCTCCTCGTACTTCTTACACTCATGTATAACTTGTTTCGCAGAATCATTCTACCTGGATCTCCATCCTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGGCTATAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAGTCTCTGACCTTATTAAGAAGGTCCCCCTAATTCTTTCTGCCAACCCCGAGATCCTATTTCCCATATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGCGATTACCAAATTAGTATGTTTTGCTCCTCAAATTTTAAAACGAAGTTTAAACCAAGAAATTATTCCATTCTTTGATTACATTCAAGCCGTGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGCGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTTCCGGATTCAAATATTTCAACTTATCTTCAGCGGCAGCCTAAAGTGTTCTCGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTATTGTTGCTGTTCATGCTCTGCGATCATTAACCAAATCTTCATGGGATAAGAAGCTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCTATTTAGCTTTTAGAAAGTATCCATGGTGTATGGCACTTTCTGAGGAAAAGATTAATGATACAATGGATTTTTTTATCAACAAAATGGGACGTGAATCATCTCTGGTTGCTAGAAGACCAAGTTTACTTTCATATAGTTTGAAGAAGAGGCTTTTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGGAAAAGAATCTTGATTTGTTGTTTGAGCCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACGCTCATAAGGAGCAGGTTCCTGGATTGTTGGAGTTGTATGAACAGAAGCTAATGAATTTAGAAGATGAACAGGTTCGATCTCCTTGA

mRNA sequence

CCGGCGGTCGCATGACCTCTCCGGTTCGCGCCGGTCATTTTCCTTCATAGCTTCATCCTCGTTTGAGGAATTTCTAGTTTCTCTAATTCTTCTTCTCTAGAAGGAGCCAACAGGTCAGTCTTCCTTCTCCTCGTACTTCTTACACTCATGTATAACTTGTTTCGCAGAATCATTCTACCTGGATCTCCATCCTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGGCTATAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAGTCTCTGACCTTATTAAGAAGGTCCCCCTAATTCTTTCTGCCAACCCCGAGATCCTATTTCCCATATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGCGATTACCAAATTAGTATGTTTTGCTCCTCAAATTTTAAAACGAAGTTTAAACCAAGAAATTATTCCATTCTTTGATTACATTCAAGCCGTGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGCGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTTCCGGATTCAAATATTTCAACTTATCTTCAGCGGCAGCCTAAAGTGTTCTCGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTATTGTTGCTGTTCATGCTCTGCGATCATTAACCAAATCTTCATGGGATAAGAAGCTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCTATTTAGCTTTTAGAAAGTATCCATGGTGTATGGCACTTTCTGAGGAAAAGATTAATGATACAATGGATTTTTTTATCAACAAAATGGGACGTGAATCATCTCTGGTTGCTAGAAGACCAAGTTTACTTTCATATAGTTTGAAGAAGAGGCTTTTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGGAAAAGAATCTTGATTTGTTGTTTGAGCCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACGCTCATAAGGAGCAGGTTCCTGGATTGTTGGAGTTGTATGAACAGAAGCTAATGAATTTAGAAGATGAACAGGTTCGATCTCCTTGA

Coding sequence (CDS)

ATGTATAACTTGTTTCGCAGAATCATTCTACCTGGATCTCCATCCTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGGCTATAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAGTCTCTGACCTTATTAAGAAGGTCCCCCTAATTCTTTCTGCCAACCCCGAGATCCTATTTCCCATATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGCGATTACCAAATTAGTATGTTTTGCTCCTCAAATTTTAAAACGAAGTTTAAACCAAGAAATTATTCCATTCTTTGATTACATTCAAGCCGTGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGCGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTTCCGGATTCAAATATTTCAACTTATCTTCAGCGGCAGCCTAAAGTGTTCTCGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTATTGTTGCTGTTCATGCTCTGCGATCATTAACCAAATCTTCATGGGATAAGAAGCTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCTATTTAGCTTTTAGAAAGTATCCATGGTGTATGGCACTTTCTGAGGAAAAGATTAATGATACAATGGATTTTTTTATCAACAAAATGGGACGTGAATCATCTCTGGTTGCTAGAAGACCAAGTTTACTTTCATATAGTTTGAAGAAGAGGCTTTTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGGAAAAGAATCTTGATTTGTTGTTTGAGCCTCCTGAAAAGCGTTTCATAGAAAAATACATCAACGCTCATAAGGAGCAGGTTCCTGGATTGTTGGAGTTGTATGAACAGAAGCTAATGAATTTAGAAGATGAACAGGTTCGATCTCCTTGA

Protein sequence

MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRKAIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLMNLEDEQVRSP*

Homology

[Close]

BLAST of CsGy3G014260 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 55/297 (18.52%), Postives = 117/297 (39.39%), Query Frame = 0


Query: 47  SLASNVVQLKNNRKAIIAFFENHGFSESQVSDLIKKV---PLILSANPEILFPILLFFKS 106
           S+    + L  N+K  +     HG  + ++S ++ KV    L+   + E +  ++ F + 
Sbjct: 171 SVVDTSILLSFNQKVRLLLL--HGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEP 230

Query: 107 KGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKR---------- 166
            G        ++   P IL   L+ ++IP  D+I+ + G  +    T+ R          
Sbjct: 231 FGGIG-----IIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSV 290

Query: 167 ---------------------------FPRILGWNLRISVGPNIEILKQFGVPDSNISTY 226
                                      FP ++  +    + P IE LK+ G     +  +
Sbjct: 291 EHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKF 350

Query: 227 LQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWG 286
           L + P + + S       +  + ++G+  +  +   A+ A+   +  +  + + +Y  +G
Sbjct: 351 LSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYG 410

Query: 287 LSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRL 304
           LS E+      K+P  +  +   + + +++ I  MGRE   +   P+ L Y L  R+
Sbjct: 411 LSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRI 460

[Close]

BLAST of CsGy3G014260 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-08
Identity = 62/254 (24.41%), Postives = 119/254 (46.85%), Query Frame = 0


Query: 83  VPLILSANPEILFPILLFFKSKGLSSPAITKLVCFA-------------PQILKRSLNQE 142
           VP +L   PE+     L FK +G  S ++  LV                P+IL   + + 
Sbjct: 232 VPRVLERYPEV-----LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARI 291

Query: 143 IIPFFDYIQAVLGTVEKTVA-TIKRFPRILGWNLRISVGPNIEILKQFGVPDSNISTYLQ 202
           I P  +Y++ VLG      A  I++ P ILG+ L  +V PN++IL+ F V ++++ + + 
Sbjct: 292 IKPLVEYLE-VLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIA 351

Query: 203 RQPKVFSTSSIRFKEIVER---VTEMGFNPQRL-QFIVAVHALRSLTKSSWDKKLEVYRK 262
           + P++     ++ K   +R    + +  NP+ L   I  +    SL++S   K ++   K
Sbjct: 352 QYPEIIGI-DLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTK 411

Query: 263 WGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLF 319
            G S ++        P  +AL+   +  + ++F  +M R    +   P+  +Y L+  + 
Sbjct: 412 CGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVK 471

[Close]

BLAST of CsGy3G014260 vs. NCBI nr
Match: KAE8650381.1 (hypothetical protein Csa_010623 [Cucumis sativus])

HSP 1 Score: 717 bits (1850), Expect = 3.41e-260
Identity = 368/370 (99.46%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEFYLAFRKYPWCMALSE+KINDTMDFFINKMGRESSLVARRPSLLSYSLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 NLEDEQVRSP 370
           NLEDEQVRSP
Sbjct: 361 NLEDEQVRSP 370

[Close]

BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011651039.2 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 709 bits (1831), Expect = 2.89e-257
Identity = 364/367 (99.18%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEFYLAFRKYPWCMALSE+KINDTMDFFINKMGRESSLVARRPSLLSYSLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 NLEDEQV 367
           NLEDEQ+
Sbjct: 361 NLEDEQI 367

[Close]

BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011651040.2 (transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 708 bits (1828), Expect = 7.13e-257
Identity = 364/366 (99.45%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEFYLAFRKYPWCMALSE+KINDTMDFFINKMGRESSLVARRPSLLSYSLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 NLEDEQ 366
           NLEDEQ
Sbjct: 361 NLEDEQ 366

[Close]

BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_008438831.1 (PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo] >KAA0049464.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16143.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 592 bits (1527), Expect = 4.42e-211
Identity = 305/361 (84.49%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
            +IAFFENHGFSESQ+SDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEF LAFR++P CM  SE+KIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

[Close]

BLAST of CsGy3G014260 vs. NCBI nr
Match: XP_011652761.2 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucumis sativus])

HSP 1 Score: 588 bits (1517), Expect = 1.47e-209
Identity = 300/361 (83.10%), Postives = 327/361 (90.58%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSVF+HGFSE PLKSLR+LSTSSEIVSSPKSASL SNVVQL NNRK
Sbjct: 1   MYNLFRRIILLRSPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSASLPSNVVQLMNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           AIIAFFENHGFSESQ+SD +KKVPL+LS NPE LFPILLFF+SKGLSS AITKLVC  PQ
Sbjct: 61  AIIAFFENHGFSESQISDFVKKVPLMLSENPETLFPILLFFQSKGLSSSAITKLVCSVPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTV TIKRFPRILGWNLRISVGPNIEILKQ GVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVTTIKRFPRILGWNLRISVGPNIEILKQLGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNISTYLQRQPK+F TSSI+FKEI+ERV EMGF+PQRLQF+VAV ALRSLTKSSWDKKLE
Sbjct: 181 SNISTYLQRQPKMFFTSSIQFKEIIERVMEMGFSPQRLQFLVAVFALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEE+F +AFR+ P C+  SE+K N  MDFF+NK+G +SS VAR+P L+S SLK
Sbjct: 241 VYRKWGLSEEDFRIAFRRNPMCITFSEDKTNSVMDFFVNKIGCQSSFVARKPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KR+FPRGYVYQVLLSKGLIKK K + LLFE PEKRFIEK+IN HKEQ+PGLLELYEQKLM
Sbjct: 301 KRIFPRGYVYQVLLSKGLIKKHKKIILLFESPEKRFIEKFINPHKEQIPGLLELYEQKLM 360

[Close]

BLAST of CsGy3G014260 vs. ExPASy TrEMBL
Match: A0A5D3CW97 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00680 PE=3 SV=1)

HSP 1 Score: 592 bits (1527), Expect = 2.14e-211
Identity = 305/361 (84.49%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
            +IAFFENHGFSESQ+SDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEF LAFR++P CM  SE+KIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

[Close]

BLAST of CsGy3G014260 vs. ExPASy TrEMBL
Match: A0A1S3AXC4 (uncharacterized protein LOC103483817 OS=Cucumis melo OX=3656 GN=LOC103483817 PE=3 SV=1)

HSP 1 Score: 592 bits (1527), Expect = 2.14e-211
Identity = 305/361 (84.49%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
            +IAFFENHGFSESQ+SDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEEF LAFR++P CM  SE+KIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HKEQ+PGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

[Close]

BLAST of CsGy3G014260 vs. ExPASy TrEMBL
Match: A0A5D3D105 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00640 PE=3 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 1.07e-204
Identity = 296/361 (81.99%), Postives = 323/361 (89.47%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           A++AFF NHGFSESQ+SDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN RISVGPNIE+LKQ GVPD
Sbjct: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALRS+TKS+WDKK+E
Sbjct: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEE  LAFRK+P CM LSE+ INDTMDFF+NKM  ESS VARRP+L ++SLK
Sbjct: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKK KN   LFE PEKRFIEK IN  KE++PGLLELYEQKLM
Sbjct: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360

[Close]

BLAST of CsGy3G014260 vs. ExPASy TrEMBL
Match: A0A1S3AWZ8 (transcription termination factor MTEF1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483815 PE=3 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 1.07e-204
Identity = 296/361 (81.99%), Postives = 323/361 (89.47%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120
           A++AFF NHGFSESQ+SDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120

Query: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN RISVGPNIE+LKQ GVPD
Sbjct: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180

Query: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLE 240
           SNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALRS+TKS+WDKK+E
Sbjct: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240

Query: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300
           VYRKWGLSEEE  LAFRK+P CM LSE+ INDTMDFF+NKM  ESS VARRP+L ++SLK
Sbjct: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKK KN   LFE PEKRFIEK IN  KE++PGLLELYEQKLM
Sbjct: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360

[Close]

BLAST of CsGy3G014260 vs. ExPASy TrEMBL
Match: A0A5A7U2M1 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00920 PE=3 SV=1)

HSP 1 Score: 518 bits (1335), Expect = 4.13e-182
Identity = 276/371 (74.39%), Postives = 308/371 (83.02%), Query Frame = 0


Query: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           M  LFRRI+L  SPSSVF+HGFSE PLKSLRFLSTSSE+VSSPKSASLASN V LKNNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKLVCFAP 120
            +IA   NHGFS+SQ+SDL K++P I SANPE  L P LLF +SKGLSSP I K VC  P
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120

Query: 121 QILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVP 180
            +L  SLN+ IIP FDYIQAVLGT EK VA IKRF  IL  +LRISVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKL 240
           DSNISTYLQ+QP++F  SSIRFKEIVERVTEMGFNP+RLQF+VAV ALRS+TKS+WDKK+
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSL 300
           EVYRKWGLSEEE  LAFRK PW M  SE+KIND MDFF+NK+G ES LVARRP L++ SL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKL 360
           KKR+ PRGY+YQVLLSKGLI   KN   LF   E RFIEK+IN HKEQ+PGLL+LY+QKL
Sbjct: 301 KKRILPRGYIYQVLLSKGLI---KNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 360

Query: 361 MNLEDEQVRSP 370
           M+LEDEQVRSP
Sbjct: 361 MDLEDEQVRSP 368

[Close]

BLAST of CsGy3G014260 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-60
Identity = 124/318 (38.99%), Postives = 199/318 (62.58%), Query Frame = 0


Query: 42  SPKSASLASNVVQLKNNRK--AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPIL 101
           SP SA++AS  + L +  +   ++    +HGF+ +Q+S L+KK P++L AN E +L P L
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRIL 161
            FF S G+S   + + +   P IL RSL  ++IP ++++++VL + EK VA ++R   + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 GWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRL 221
             +   ++ PNI  + + GVP+  I   L   P+     +  F+ I ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFIVAVHALRSL-TKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFF 281
            F++A+HAL     KS WDK  EVY++WG SE++   AF+K+P CM LSE KIN TM++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 INKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFI 341
           +N+M      +A+ P +L +SL+KR+ PR  V +VL+S GL+K++ +L  L  P EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKYINAHKEQVPGLLELY 356
           EK +  ++E++P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of CsGy3G014260 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.8e-50
Identity = 102/316 (32.28%), Postives = 194/316 (61.39%), Query Frame = 0


Query: 42  SPKSASLASNVVQLKNNRK--AIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPIL 101
           S +SA   S  V+L +++K  +++A F++HGF+  Q++ +IK  P +LS +PE ++ P L
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRIL 161
           +FF S G S+    K++  +P++L  SL++ +IP +D ++++L   E  V  +KR  R  
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 GWNLRISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRL 221
              +   V   + I ++ GVPD +I   +Q  P  F +   RF E++ RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTMDFFI 281
            F+ A+ A    ++S+ ++K ++++ +G S+E+F  A  ++P C+ +S+EKI  T+++ +
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLIKKEK-NLDLLFEPPEKRFI 341
           N +G ++  +  RP +LS S++KR+ PR  V  +LLSKGL+KKE  N   + +     F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 EKYINAHKEQVPGLLE 354
           +K++  +++++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsGy3G014260 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.2e-36
Identity = 99/335 (29.55%), Postives = 183/335 (54.63%), Query Frame = 0


Query: 43  PKSASLASNVVQLKN--NRKAIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILL 102
           P + ++A     LK+    +++I   +++ FS++Q+   I+  P ++  N E IL P L 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFKSKGLSSPAITKLVCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILG 162
           FFK  G +   + K V     ++  SL +++IP  + +++++    + +  I       G
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVIL---SRCG 172

Query: 163 WNL-----RISVGPNIEILKQFGVPDSNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFN 222
           W L      + + PNI  L+  G+  S +++ L+RQP++F+ S  + +  V R  ++GF 
Sbjct: 173 WLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFT 232

Query: 223 PQRLQFIVAVHALRSLTKSSWDKKLEVYRKWGLSEEEFYLAFRKYPWCMALSEEKINDTM 282
                 + AV +L SL++ ++D+K++++   G SE+E     R+ P  +  SE+K+    
Sbjct: 233 LNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGF 292

Query: 283 DFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKGLI----KKEKNLDLLFE 342
           +F++ +MG E   +A+RP +LSY+L+KR+ PR  V Q+L  KGL+    KK+KN+  + E
Sbjct: 293 EFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVE 352

Query: 343 PPEKRFIEKYINAHKEQVPGLLELYEQKLMNLEDE 366
             E+ F+EKY+    +++   L L   K + L DE
Sbjct: 353 MTEEAFLEKYVVRFGDEIAEEL-LVAYKCVCLVDE 383

[Close]

BLAST of CsGy3G014260 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 135.6 bits (340), Expect = 8.3e-32
Identity = 94/341 (27.57%), Postives = 171/341 (50.15%), Query Frame = 0


Query: 56  KNNRKAIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKL 115
           KNN  +++    +HGF+ SQ+S +I+  P +L A+ E  L P L F +S+G SS  IT++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILK 175
           V   P+IL +  ++ I  ++D+I+  L  +EK+    K    +   NL   +  N+ +L+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKI-RNVSVLR 200

Query: 176 QFGVPDSNISTYL--QRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTK 235
           + G+P   + + L    QP        +F+E +++V EMGF+P   +F+ A+  +  + +
Sbjct: 201 ELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNE 260

Query: 236 SSWDKKLEVY--------------RKW---------------------GLSEEEFYLAFR 295
            + ++K+ +Y              +KW                     G S +EF    +
Sbjct: 261 KTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVK 320

Query: 296 KYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKG 355
            +P C+ LS E +    +F + KM      V   P++  YSL+KR+ PRG V + L+SKG
Sbjct: 321 HFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKG 380

[Close]

BLAST of CsGy3G014260 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 135.6 bits (340), Expect = 8.3e-32
Identity = 94/341 (27.57%), Postives = 171/341 (50.15%), Query Frame = 0


Query: 56  KNNRKAIIAFFENHGFSESQVSDLIKKVPLILSANPE-ILFPILLFFKSKGLSSPAITKL 115
           KNN  +++    +HGF+ SQ+S +I+  P +L A+ E  L P L F +S+G SS  IT++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCFAPQILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILK 175
           V   P+IL +  ++ I  ++D+I+  L  +EK+    K    +   NL   +  N+ +L+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKI-RNVSVLR 200

Query: 176 QFGVPDSNISTYL--QRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTK 235
           + G+P   + + L    QP        +F+E +++V EMGF+P   +F+ A+  +  + +
Sbjct: 201 ELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNE 260

Query: 236 SSWDKKLEVY--------------RKW---------------------GLSEEEFYLAFR 295
            + ++K+ +Y              +KW                     G S +EF    +
Sbjct: 261 KTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVK 320

Query: 296 KYPWCMALSEEKINDTMDFFINKMGRESSLVARRPSLLSYSLKKRLFPRGYVYQVLLSKG 355
            +P C+ LS E +    +F + KM      V   P++  YSL+KR+ PRG V + L+SKG
Sbjct: 321 HFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKG 380

The following BLAST results are available for this feature:

BLAST of CsGy3G014260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	1.1e-09	18.52	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	2.1e-08	24.41	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CsGy3G014260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650381.1	3.41e-260	99.46	hypothetical protein Csa_010623 [Cucumis sativus]	[more]
XP_011651039.2	2.89e-257	99.18	transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X1 ...	[more]
XP_011651040.2	7.13e-257	99.45	transcription termination factor MTERF6, chloroplastic/mitochondrial isoform X2 ...	[more]
XP_008438831.1	4.42e-211	84.49	PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo] >KAA0049464.1 tra...	[more]
XP_011652761.2	1.47e-209	83.10	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucum...	[more]

BLAST of CsGy3G014260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CW97	2.14e-211	84.49	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AXC4	2.14e-211	84.49	uncharacterized protein LOC103483817 OS=Cucumis melo OX=3656 GN=LOC103483817 PE=...	[more]
A0A5D3D105	1.07e-204	81.99	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AWZ8	1.07e-204	81.99	transcription termination factor MTEF1, chloroplastic-like OS=Cucumis melo OX=36...	[more]
A0A5A7U2M1	4.13e-182	74.39	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CsGy3G014260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.9e-60	38.99	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.8e-50	32.28	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	3.2e-36	29.55	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	8.3e-32	27.57	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	8.3e-32	27.57	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 253..284 e-value: 2.4 score: 17.1 coord: 112..144 e-value: 260.0 score: 8.5 coord: 148..179 e-value: 10.0 score: 15.1 coord: 285..319 e-value: 6.1 score: 15.8 coord: 77..107 e-value: 9.4 score: 15.2 coord: 184..214 e-value: 350.0 score: 7.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..222 e-value: 5.4E-17 score: 61.7 coord: 170..334 e-value: 6.4E-22 score: 77.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 39..361
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 143..349 e-value: 5.0E-46 score: 159.0
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 39..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014260.1	CsGy3G014260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding