CsGy3G014090 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G014090
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	BHLH domain-containing protein
Location	Gy14Chr3: 10487650 .. 10489247 (+)
RNA-Seq Expression	CsGy3G014090
Synteny	CsGy3G014090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATAATAAAAATAATGATAGAGCAAATAAAAATAAATATTACCTAACCATTATGCATCTCCTCTCTATGAAAAATTTCAAAATTTGTCTTTTATAAAATCATTTTCATAACATGTGATAATATTTGCGAGCGCACAAAAGATGGATGATGCAACTCATGCAAGTTTTCTCAATGATCAAGGTTGCTTTAGAAAATACTTAAACGTACTTCTAATCATCAGCTCTTTTTTTTCTTTTTTTCTTTTTGTGCATTAATTTGTTTCCATTTTTAAAATATTTTTTACGGTAGCGGTGGAAAAAGAAAAAGAAAAGACAGAGAGTACGTCGGGGGGAAATGATAACAGAAAAATTACAATCGCAAGAAAGATTACAAAGAGAATTAGCGATTCCAAAGTGTAAAATCGGTAGTTTTTTTTTTGGAATATTTTCAATCATTTTCTTCTTCCATTTCTGAATTTGATCGATCTCTCTCTCTCTCCCACGCACATTGTTCTATCCTTCTTATTGCTTCATAAAAAGCTTCATCAATGGCGGATTAAAGAAACAAACCAACAACAGAAGATCAGCAAGCTTCTGTTTGTACTAATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGTTAGTGGATGGTGGATTTGATTCTTGCATGCTTTAGTATAGAATCTGGATATACCTGTTGTAGGTACATTTTGTATTCGTAGTTTTAATTAATTCTGTTTTGATGCTGAAATAATCAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAGGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAATAACTTCCATTATATTCACGAGATTCTTCCCTCTTTATTTACTATGATAGGGATGTTTAACACTTTTACAGAACTAGAAACTGAACGAATACAATACATTGGTAATATATATTTTGTCTTTTGCTTCAAATTCATGTTATTATTGAATATTTGTTAAAAGATCAAGTTGGCTTCACCTTTTGATTCTAAATATAATTCTTATTTGCAAGATAAAAACATCTCTCTCTCTCTCTCTCTGCTGTTTCTGTTTTTAGTACAACAATTGGTAGATGATCACGAATGAA

mRNA sequence

ACCATAATAAAAATAATGATAGAGCAAATAAAAATAAATATTACCTAACCATTATGCATCTCCTCTCTATGAAAAATTTCAAAATTTGTCTTTTATAAAATCATTTTCATAACATGTGATAATATTTGCGAGCGCACAAAAGATGGATGATGCAACTCATGCAAGTTTTCTCAATGATCAAGCGGTGGAAAAAGAAAAAGAAAAGACAGAGAGTACGTCGGGGGGAAATGATAACAGAAAAATTACAATCGCAAGAAAGATTACAAAGAGAATTAGCGATTCCAAAGTGTAAAATCGGTAGTTTTTTTTTTGGAATATTTTCAATCATTTTCTTCTTCCATTTCTGAATTTGATCGATCTCTCTCTCTCTCCCACGCACATTGTTCTATCCTTCTTATTGCTTCATAAAAAGCTTCATCAATGGCGGATTAAAGAAACAAACCAACAACAGAAGATCAGCAAGCTTCTGTTTGTACTAATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAGGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAATAACTTCCATTATATTCACGAGATTCTTCCCTCTTTATTTACTATGATAGGGATGTTTAACACTTTTACAGAACTAGAAACTGAACGAATACAATACATTGGTAATATATATTTTGTCTTTTGCTTCAAATTCATGTTATTATTGAATATTTGTTAAAAGATCAAGTTGGCTTCACCTTTTGATTCTAAATATAATTCTTATTTGCAAGATAAAAACATCTCTCTCTCTCTCTCTCTGCTGTTTCTGTTTTTAGTACAACAATTGGTAGATGATCACGAATGAA

Coding sequence (CDS)

ATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAGGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAA

Protein sequence

MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGLKK*

Homology

[Close]

BLAST of CsGy3G014090 vs. ExPASy Swiss-Prot
Match: Q9FXA3 (Transcription factor bHLH95 OS=Arabidopsis thaliana OX=3702 GN=BHLH95 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-05
Identity = 54/206 (26.21%), Postives = 85/206 (41.26%), Query Frame = 0


Query: 48  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK------- 107
           E+E+RK+M + F  L +L+P L PKA + TIV  A+  I+ L++ L +LEM+K       
Sbjct: 78  ERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYS 137

Query: 108 ------------------KSSESVALLPNTN---------------------SDSSGG-- 167
                              SS +  L P +N                     S SS    
Sbjct: 138 SASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLADQVSSSSAAAA 197

Query: 168 ----------INGD-----GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLA 191
                     +N D      V+++I GN   F + +   + G+ T +  +FE++  EVL 
Sbjct: 198 NLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHKPGVFTSVCYLFEKYNMEVLF 257

[Close]

BLAST of CsGy3G014090 vs. ExPASy Swiss-Prot
Match: Q56YJ8 (Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 8.7e-04
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 24  TEKEASASRKRCRALEANGGVQKK-------EKEKRKEMSESFDVLRSLVP-NLSPKATR 83
           T+KE  + RKR R  + +  V+ +       E+ +RK+M+E   VLRSL+P +   +  +
Sbjct: 172 TKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQ 231

Query: 84  ETIVSGAIQFIEFLQKQLMRLEMEKK 102
            +I+ GAI+F+  L++ L  LE +K+
Sbjct: 232 ASIIGGAIEFVRELEQLLQCLESQKR 257

[Close]

BLAST of CsGy3G014090 vs. NCBI nr
Match: XP_004134190.1 (transcription factor bHLH95 [Cucumis sativus] >KGN57073.1 hypothetical protein Csa_011665 [Cucumis sativus])

HSP 1 Score: 374 bits (959), Expect = 5.20e-130
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDILGLKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]

BLAST of CsGy3G014090 vs. NCBI nr
Match: XP_016898986.1 (PREDICTED: transcription factor bHLH95-like [Cucumis melo] >KAA0049445.1 transcription factor bHLH95-like [Cucumis melo var. makuwa] >TYK16124.1 transcription factor bHLH95-like [Cucumis melo var. makuwa])

HSP 1 Score: 358 bits (920), Expect = 4.42e-124
Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV LLPN+NSDSSGG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of CsGy3G014090 vs. NCBI nr
Match: XP_038885840.1 (transcription factor bHLH95-like [Benincasa hispida])

HSP 1 Score: 326 bits (835), Expect = 3.96e-111
Identity = 177/202 (87.62%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+PLFPLILPVH  EATEK+ASASRKR RALEANGGVQKKE+EKRKEMSESFD
Sbjct: 1   MEACTDSVVPLFPLILPVHQSEATEKKASASRKRIRALEANGGVQKKEREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIEFLQKQLMRLEMEKKSSESV +LP+TNSDSSGG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEFLQKQLMRLEMEKKSSESVTMLPSTNSDSSGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
            G GVIVS+SGNIVLFG+IIASVQRG+VTQIL+VFERH+AEVLAANV VSHGNLTLTVTA
Sbjct: 121 GGGGVIVSVSGNIVLFGIIIASVQRGMVTQILMVFERHQAEVLAANVAVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIE I+NDIL LKK
Sbjct: 181 SVHGYVENTIELIKNDILSLKK 201

[Close]

BLAST of CsGy3G014090 vs. NCBI nr
Match: XP_022979931.1 (uncharacterized protein LOC111479473 [Cucurbita maxima])

HSP 1 Score: 293 bits (750), Expect = 3.74e-98
Identity = 162/203 (79.80%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGG Q+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 NGDG-VIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVT 180
            GDG VIVS+S NIVLFG+I ASV+RG+VT+IL+ FERH+AEVLAANV VSHGNLTLTVT
Sbjct: 121 GGDGGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHGYVENTIEQIRNDILGLKK 202
           ASVHGYVENTIEQIRNDIL LKK
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]

BLAST of CsGy3G014090 vs. NCBI nr
Match: XP_022955986.1 (uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 uncharacterized protein LOC111457838 isoform X1 [Cucurbita moschata])

HSP 1 Score: 292 bits (748), Expect = 6.36e-98
Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
              GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTA
Sbjct: 121 ---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 198

[Close]

BLAST of CsGy3G014090 vs. ExPASy TrEMBL
Match: A0A0A0L5R7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 2.52e-130
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDILGLKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]

BLAST of CsGy3G014090 vs. ExPASy TrEMBL
Match: A0A5A7U767 (Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00480 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 2.14e-124
Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV LLPN+NSDSSGG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of CsGy3G014090 vs. ExPASy TrEMBL
Match: A0A1S4DSM0 (transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 2.14e-124
Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV LLPN+NSDSSGG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of CsGy3G014090 vs. ExPASy TrEMBL
Match: A0A6J1IS55 (uncharacterized protein LOC111479473 OS=Cucurbita maxima OX=3661 GN=LOC111479473 PE=4 SV=1)

HSP 1 Score: 293 bits (750), Expect = 1.81e-98
Identity = 162/203 (79.80%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGG Q+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 NGDG-VIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVT 180
            GDG VIVS+S NIVLFG+I ASV+RG+VT+IL+ FERH+AEVLAANV VSHGNLTLTVT
Sbjct: 121 GGDGGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHGYVENTIEQIRNDILGLKK 202
           ASVHGYVENTIEQIRNDIL LKK
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]

BLAST of CsGy3G014090 vs. ExPASy TrEMBL
Match: A0A6J1GWN9 (uncharacterized protein LOC111457820 OS=Cucurbita moschata OX=3662 GN=LOC111457838 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 3.08e-98
Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
              GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTA
Sbjct: 121 ---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 198

[Close]

BLAST of CsGy3G014090 vs. TAIR 10
Match: AT1G49770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 54/206 (26.21%), Postives = 85/206 (41.26%), Query Frame = 0


Query: 48  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK------- 107
           E+E+RK+M + F  L +L+P L PKA + TIV  A+  I+ L++ L +LEM+K       
Sbjct: 78  ERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYS 137

Query: 108 ------------------KSSESVALLPNTN---------------------SDSSGG-- 167
                              SS +  L P +N                     S SS    
Sbjct: 138 SASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLADQVSSSSAAAA 197

Query: 168 ----------INGD-----GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLA 191
                     +N D      V+++I GN   F + +   + G+ T +  +FE++  EVL 
Sbjct: 198 NLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHKPGVFTSVCYLFEKYNMEVLF 257

[Close]

BLAST of CsGy3G014090 vs. TAIR 10
Match: AT3G24140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.2e-05
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 24  TEKEASASRKRCRALEANGGVQKK-------EKEKRKEMSESFDVLRSLVP-NLSPKATR 83
           T+KE  + RKR R  + +  V+ +       E+ +RK+M+E   VLRSL+P +   +  +
Sbjct: 172 TKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQ 231

Query: 84  ETIVSGAIQFIEFLQKQLMRLEMEKK 102
            +I+ GAI+F+  L++ L  LE +K+
Sbjct: 232 ASIIGGAIEFVRELEQLLQCLESQKR 257

[Close]

BLAST of CsGy3G014090 vs. TAIR 10
Match: AT5G46690.1 (beta HLH protein 71 )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 26/74 (35.14%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 48  EKEKRKEMSESFDVLRSLVPN-LSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV 107
           E+ +R++M++   VLRSL+P   + K  + +IV GAI FI+ L+ +L+ LE +K  +  +
Sbjct: 94  ERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHHNAKL 153

Query: 108 --ALLPNTNSDSSG 119
             ++  +T+ DS+G
Sbjct: 154 NQSVTSSTSQDSNG 167

The following BLAST results are available for this feature:

BLAST of CsGy3G014090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA3	2.1e-05	26.21	Transcription factor bHLH95 OS=Arabidopsis thaliana OX=3702 GN=BHLH95 PE=2 SV=2	[more]
Q56YJ8	8.7e-04	33.72	Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1	[more]

BLAST of CsGy3G014090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134190.1	5.20e-130	100.00	transcription factor bHLH95 [Cucumis sativus] >KGN57073.1 hypothetical protein C...	[more]
XP_016898986.1	4.42e-124	96.04	PREDICTED: transcription factor bHLH95-like [Cucumis melo] >KAA0049445.1 transcr...	[more]
XP_038885840.1	3.96e-111	87.62	transcription factor bHLH95-like [Benincasa hispida]	[more]
XP_022979931.1	3.74e-98	79.80	uncharacterized protein LOC111479473 [Cucurbita maxima]	[more]
XP_022955986.1	6.36e-98	80.20	uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 unchar...	[more]

BLAST of CsGy3G014090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R7	2.52e-130	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 S...	[more]
A0A5A7U767	2.14e-124	96.04	Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4DSM0	2.14e-124	96.04	transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV...	[more]
A0A6J1IS55	1.81e-98	79.80	uncharacterized protein LOC111479473 OS=Cucurbita maxima OX=3661 GN=LOC111479473...	[more]
A0A6J1GWN9	3.08e-98	80.20	uncharacterized protein LOC111457820 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]

BLAST of CsGy3G014090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49770.1	1.5e-06	26.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G24140.1	6.2e-05	33.72	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46690.1	2.3e-04	35.14	beta HLH protein 71	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 6..198
None	No IPR available	PANTHER	PTHR31945:SF53	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 6..198
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 55..97 e-value: 1.21326E-7 score: 44.8648
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 47..95 e-value: 1.0E-5 score: 35.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 46..90 e-value: 9.9E-6 score: 25.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 39..89 score: 10.137232
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 44..114 e-value: 6.3E-10 score: 40.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 47..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014090.1	CsGy3G014090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding