CsGy3G013295 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G013295
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 9927716 .. 9928033 (+)
RNA-Seq ExpressionCsGy3G013295
SyntenyCsGy3G013295
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTAGACAATGTGGGCTGCCAATATGGCGTCCGAGATAGATCTCAGTCTAGAAATGATTTTGAGACCTGTCACATAAACTTGCGCAGTCGTGGTGTTTGGCCACCTACACTTCGGAGCTCATTTTGTCAGTGTAGCTCATTTTGTCATACTTATCAGTTCAATTGTCTCCTTTGCTTGATTCGTTCGGCTATTCGGAGGCTTGGTTTAAGTCAGAGAACGAACAGCGTGCTCCAATGGGTTTCAAGACATGCGTCTTCCGGTGGTTTAGGTCATGTGGCAAGCTATATGAGTATGGCGATGCCAATAACATAA

mRNA sequence

ATGAATTTAGACAATGTGGGCTGCCAATATGGCGTCCGAGATAGATCTCAGTCTAGAAATGATTTTGAGACCTGTCACATAAACTTGCGCAGTCGTGGTGTTTGGCCACCTACACTTCGGAGCTCATTTTGTCAGTGTAGCTCATTTTGTCATACTTATCAGTTCAATTGTCTCCTTTGCTTGATTCGTTCGGCTATTCGGAGGCTTGGTTTAAGTCAGAGAACGAACAGCGTGCTCCAATGGGTTTCAAGACATGCGTCTTCCGGTGGTTTAGGTCATGTGGCAAGCTATATGAGTATGGCGATGCCAATAACATAA

Coding sequence (CDS)

ATGAATTTAGACAATGTGGGCTGCCAATATGGCGTCCGAGATAGATCTCAGTCTAGAAATGATTTTGAGACCTGTCACATAAACTTGCGCAGTCGTGGTGTTTGGCCACCTACACTTCGGAGCTCATTTTGTCAGTGTAGCTCATTTTGTCATACTTATCAGTTCAATTGTCTCCTTTGCTTGATTCGTTCGGCTATTCGGAGGCTTGGTTTAAGTCAGAGAACGAACAGCGTGCTCCAATGGGTTTCAAGACATGCGTCTTCCGGTGGTTTAGGTCATGTGGCAAGCTATATGAGTATGGCGATGCCAATAACATAA

Protein sequence

MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLCLIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT*
Homology
[Close]
BLAST of CsGy3G013295 vs. NCBI nr
Match: KGN56986.1 (hypothetical protein Csa_010132 [Cucumis sativus])

HSP 1 Score: 224 bits (570), Expect = 7.49e-74
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60
           MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC
Sbjct: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60

Query: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 105
           LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT
Sbjct: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 105

[Close]
BLAST of CsGy3G013295 vs. ExPASy TrEMBL
Match: A0A0A0LAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146710 PE=4 SV=1)

HSP 1 Score: 224 bits (570), Expect = 3.63e-74
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60
           MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC
Sbjct: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60

Query: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 105
           LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT
Sbjct: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 105

The following BLAST results are available for this feature:
BLAST of CsGy3G013295 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G013295 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56986.17.49e-74100.00hypothetical protein Csa_010132 [Cucumis sativus][more]
BLAST of CsGy3G013295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAA43.63e-74100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146710 PE=4 SV=1[more]
BLAST of CsGy3G013295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G013295.1CsGy3G013295.1mRNA