CsGy3G012950 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G012950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Epidermal patterning factor-like protein
Location	Gy14Chr3: 9727529 .. 9728793 (+)
RNA-Seq Expression	CsGy3G012950
Synteny	CsGy3G012950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACAAACACCCTCCCCTCTCCCTCTCCCTCTCCTTCTCTCCTCTCTCTCTCTCTTACAACCTTTTTGAGCTCCATGTCTTTGACTTACAATCCTCTCTAAATATTTATTTTAAAACAATAATAGAGAGAGCAAAGGAATGAACATGCAGAGCCAGAATCAGAAGCAGAAGCAGAAGCAGATGAACAGATTCAACAAAATTTCCACCTTCTCCAACTCTCTTCTTCCTATTTTCATACACATATAAATCTCACACACCCCCTCTTTTCCTTCTATTTCTGAATGGGATCATCTTTCTTACCCTCTCCTCATCCATCTCATTTCCATTTCTCTCTTCTAATTCTCACTCTCTTCGCCTTTCAGCTCGCCTCCGCTTCTTCTTCTTCTTCTTCATCATCTTCAGGTAAATTTACAATCACCCATCGGCTTACTTTTTTAAAAAACAACGAATGTTTCATTAAATTTATACTGACGTGTCAGAAACCGGTGGGTGGATTGGGGATCGGAAGAGCTTGGTTGGACCGGGATCTTCGCCGCCGACGTGTCTAGCCAAGTGTGGGAGATGCGGACCTTGTGAACCGGTTCATGTTCCAATTCAACCCGGTTTGAGTCTGCCTTTGGAGTATTACCCTGAAGCTTGGAGATGCAAGTGTGGGAATAAGTTGTTTATGCCTTGACATTTATAATTTTATTTCTACAATAAATACTGATTAATCTTCTCCTTTTTTGAAAAAAAAAAAACAAAAACTAACTAATTTATTAATTAATGTTGTGTTTTTGTGTGTTATTATTACTGCTATGGTTCGCATTGAAACTGGAGAGAGGAGAATAAATTATAACTTAATTAATGTATCCTTAAACATAATATTAATCATTAAACATTGATTAAAAAGTGTCGTTTTGTTGTAATTTTTGTGGGGTTTTAAATATGACACGAGGGCTTTCTTTCTAATCACGAACTCATAGCTGTTTTTATGCCTTAACGTCAGATTTTAAATTCTTCCAATCTATACTATCTGAAAGACTATGTATATGCTATTTCTTTTTCTTAATATCATCCTCTCTCTTTCATTATGCTATTTATGTATATGCTAGTTCAATGATATTATGAAGTGGAGTGGAGTGGAGTCGAGATCTATTGTACATTATTGAAATATTAATCTTCAGTATTTTCTATCTATTATGTTAGGTTCCAATTGATTTTTTTCTTCTTGTTTATACATTTCAATTACATTATTTGTGGCAGATAAATATAGTAACTTGGTG

mRNA sequence

AGACAAACACCCTCCCCTCTCCCTCTCCCTCTCCTTCTCTCCTCTCTCTCTCTCTTACAACCTTTTTGAGCTCCATGTCTTTGACTTACAATCCTCTCTAAATATTTATTTTAAAACAATAATAGAGAGAGCAAAGGAATGAACATGCAGAGCCAGAATCAGAAGCAGAAGCAGAAGCAGATGAACAGATTCAACAAAATTTCCACCTTCTCCAACTCTCTTCTTCCTATTTTCATACACATATAAATCTCACACACCCCCTCTTTTCCTTCTATTTCTGAATGGGATCATCTTTCTTACCCTCTCCTCATCCATCTCATTTCCATTTCTCTCTTCTAATTCTCACTCTCTTCGCCTTTCAGCTCGCCTCCGCTTCTTCTTCTTCTTCTTCATCATCTTCAGAAACCGGTGGGTGGATTGGGGATCGGAAGAGCTTGGTTGGACCGGGATCTTCGCCGCCGACGTGTCTAGCCAAGTGTGGGAGATGCGGACCTTGTGAACCGGTTCATGTTCCAATTCAACCCGGTTTGAGTCTGCCTTTGGAGTATTACCCTGAAGCTTGGAGATGCAAGTGTGGGAATAAGTTGTTTATGCCTTGACATTTATAATTTTATTTCTACAATAAATACTGATTAATCTTCTCCTTTTTTGAAAAAAAAAAAACAAAAACTAACTAATTTATTAATTAATGTTGTGTTTTTGTGTGTTATTATTACTGCTATGGTTCGCATTGAAACTGGAGAGAGGAGAATAAATTATAACTTAATTAATGTATCCTTAAACATAATATTAATCATTAAACATTGATTAAAAAGTGTCGTTTTGTTGTAATTTTTGTGGGGTTTTAAATATGACACGAGGGCTTTCTTTCTAATCACGAACTCATAGCTGTTTTTATGCCTTAACGTCAGATTTTAAATTCTTCCAATCTATACTATCTGAAAGACTATGTATATGCTATTTCTTTTTCTTAATATCATCCTCTCTCTTTCATTATGCTATTTATGTATATGCTAGTTCAATGATATTATGAAGTGGAGTGGAGTGGAGTCGAGATCTATTGTACATTATTGAAATATTAATCTTCAGTATTTTCTATCTATTATGTTAGGTTCCAATTGATTTTTTTCTTCTTGTTTATACATTTCAATTACATTATTTGTGGCAGATAAATATAGTAACTTGGTG

Coding sequence (CDS)

ATGGGATCATCTTTCTTACCCTCTCCTCATCCATCTCATTTCCATTTCTCTCTTCTAATTCTCACTCTCTTCGCCTTTCAGCTCGCCTCCGCTTCTTCTTCTTCTTCTTCATCATCTTCAGAAACCGGTGGGTGGATTGGGGATCGGAAGAGCTTGGTTGGACCGGGATCTTCGCCGCCGACGTGTCTAGCCAAGTGTGGGAGATGCGGACCTTGTGAACCGGTTCATGTTCCAATTCAACCCGGTTTGAGTCTGCCTTTGGAGTATTACCCTGAAGCTTGGAGATGCAAGTGTGGGAATAAGTTGTTTATGCCTTGA

Protein sequence

MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP*

Homology

[Close]

BLAST of CsGy3G012950 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.5e-27
Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 19  LILTLFAFQLASASSSSSSSSSETGGWIGDR-------------KSLVGPGSSPPTCLAK 78
           L+  L  F L    S+SS  S++ G WIG R             K   GPGSSPPTC +K
Sbjct: 11  LLAALVTFALLHLFSASSIVSAD-GRWIGQRTGSDLPGGFIRSNKRFGGPGSSPPTCRSK 70

Query: 79  CGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           CG+C PC+PVHVPIQPGLS+PLEYYPEAWRCKCGNKLFMP
Sbjct: 71  CGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CsGy3G012950 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.9e-24
Identity = 56/100 (56.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 21  LTLFAFQLASASSSSSSSSSETG---------------GWIGDRKSLVGPGSSPPTCLAK 80
           L ++AF L  +SSS++S    +G               G I D+K L GPGS PP C  K
Sbjct: 8   LIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLK 67

Query: 81  CGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           CG+C PC+ VHVPIQPGL +PLEYYPEAWRCKCGNKLFMP
Sbjct: 68  CGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CsGy3G012950 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 49  RKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           R+ L G GSSPP C +KCGRC PC+PVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of CsGy3G012950 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.8e-08
Identity = 24/58 (41.38%), Postives = 32/58 (55.17%), Query Frame = 0


Query: 48  DRKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           D K      SSPP C  KC  C PC+P  + + P  + P +YYP+ W C C NK++ P
Sbjct: 452 DEKMGASLNSSPPNCKNKCKGCQPCKPKLIIVHP--NQPEDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of CsGy3G012950 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 57  SSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           SSPP C  KC  C PC+P  + + P  + P +YYP+ W C C NK++ P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHP--NKPQDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of CsGy3G012950 vs. NCBI nr
Match: KGN56945.1 (hypothetical protein Csa_009821 [Cucumis sativus])

HSP 1 Score: 221 bits (564), Expect = 6.17e-73
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPP 60
           MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPP
Sbjct: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPP 60

Query: 61  TCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           TCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP
Sbjct: 61  TCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105

[Close]

BLAST of CsGy3G012950 vs. NCBI nr
Match: XP_008438622.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo])

HSP 1 Score: 215 bits (547), Expect = 2.94e-70
Identity = 105/111 (94.59%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSS------ETGGWIGDRKSLVG 60
           MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSS      ETGGWIGDRKSLVG
Sbjct: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSSFSSSSETGGWIGDRKSLVG 60

Query: 61  PGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           PGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP
Sbjct: 61  PGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 111

[Close]

BLAST of CsGy3G012950 vs. NCBI nr
Match: XP_038905188.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida])

HSP 1 Score: 150 bits (378), Expect = 1.13e-44
Identity = 71/98 (72.45%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 8   SPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPPTCLAKCG 67
           SP   ++HFSLL++    F L +      S+S E+GGWIGDRKSLVGPGS PPTC AKCG
Sbjct: 3   SPSNYYYHFSLLLIL---FLLTALFPRLVSASPESGGWIGDRKSLVGPGSCPPTCRAKCG 62

Query: 68  RCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           RC PCEPVHVPIQPGLS+PLEYYPEAWRCKCGNKLFMP
Sbjct: 63  RCRPCEPVHVPIQPGLSVPLEYYPEAWRCKCGNKLFMP 97

[Close]

BLAST of CsGy3G012950 vs. NCBI nr
Match: XP_010435079.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Camelina sativa])

HSP 1 Score: 124 bits (311), Expect = 2.38e-34
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 43  GGWIGDRKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKL 102
           GG++GD K   GPGSSPPTC AKCGRC PC+PVHVPIQPGLS+PLEYYPEAWRCKCG K+
Sbjct: 44  GGFMGDNKRFGGPGSSPPTCRAKCGRCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGTKI 103

Query: 103 FMP 105
           FMP
Sbjct: 104 FMP 106

[Close]

BLAST of CsGy3G012950 vs. NCBI nr
Match: KAG7615994.1 (hypothetical protein ISN45_At04g015230 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7620481.1 hypothetical protein ISN44_As04g014810 [Arabidopsis suecica] >OAO99753.1 EPFL4 [Arabidopsis thaliana] >CAA0395255.1 unnamed protein product [Arabidopsis thaliana] >CAD5327928.1 unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 122 bits (307), Expect = 1.06e-33
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 43  GGWIGDRKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKL 102
           GG++G  K   GPGSSPPTC +KCG+C PC+PVHVPIQPGLS+PLEYYPEAWRCKCGNKL
Sbjct: 47  GGFMGSNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKL 106

Query: 103 FMP 105
           FMP
Sbjct: 107 FMP 109

[Close]

BLAST of CsGy3G012950 vs. ExPASy TrEMBL
Match: A0A0A0L4P0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G146310 PE=3 SV=1)

HSP 1 Score: 221 bits (564), Expect = 2.99e-73
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPP 60
           MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPP
Sbjct: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSETGGWIGDRKSLVGPGSSPP 60

Query: 61  TCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           TCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP
Sbjct: 61  TCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105

[Close]

BLAST of CsGy3G012950 vs. ExPASy TrEMBL
Match: A0A1S3AWH2 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103483678 PE=3 SV=1)

HSP 1 Score: 215 bits (547), Expect = 1.42e-70
Identity = 105/111 (94.59%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSS------ETGGWIGDRKSLVG 60
           MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSS      ETGGWIGDRKSLVG
Sbjct: 1   MGSSFLPSPHPSHFHFSLLILTLFAFQLASASSSSSSSSSSFSSSSETGGWIGDRKSLVG 60

Query: 61  PGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           PGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP
Sbjct: 61  PGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 111

[Close]

BLAST of CsGy3G012950 vs. ExPASy TrEMBL
Match: A0A178V213 (Epidermal patterning factor-like protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g17010 PE=3 SV=1)

HSP 1 Score: 122 bits (307), Expect = 5.11e-34
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 43  GGWIGDRKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKL 102
           GG++G  K   GPGSSPPTC +KCG+C PC+PVHVPIQPGLS+PLEYYPEAWRCKCGNKL
Sbjct: 47  GGFMGSNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKL 106

Query: 103 FMP 105
           FMP
Sbjct: 107 FMP 109

[Close]

BLAST of CsGy3G012950 vs. ExPASy TrEMBL
Match: A0A2P5FWC0 (Epidermal patterning factor-like protein OS=Trema orientale OX=63057 GN=TorRG33x02_018740 PE=3 SV=1)

HSP 1 Score: 122 bits (306), Expect = 9.48e-34
Identity = 63/110 (57.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 10  HPSHFHFS---------LLILTLFAFQLASASSSSSSSS-----SETGGWIGDRKSLVGP 69
           H  H HF+         +  LTL  F  ASAS+  + +      S   G +   K L GP
Sbjct: 9   HHHHHHFNQCRFLRLSTITALTLLLFASASASAQLTPTQLRGQGSGKSGVLEPEKRLAGP 68

Query: 70  GSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           GSSPPTC  KCGRC PC+PVHVPIQPGLS+PLEYYPEAWRCKCGNKLFMP
Sbjct: 69  GSSPPTCRWKCGRCSPCKPVHVPIQPGLSIPLEYYPEAWRCKCGNKLFMP 118

[Close]

BLAST of CsGy3G012950 vs. ExPASy TrEMBL
Match: A0A2H5PP20 (Epidermal patterning factor-like protein OS=Citrus unshiu OX=55188 GN=CUMW_154070 PE=3 SV=1)

HSP 1 Score: 121 bits (304), Expect = 9.67e-34
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 48  DRKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 105
           D+K + GPGSSPPTC +KCGRC PC+PVHVPIQPGLS+PLEYYPEAWRCKCGNKLFMP
Sbjct: 38  DQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 95

[Close]

BLAST of CsGy3G012950 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 6.0e-28
Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 19  LILTLFAFQLASASSSSSSSSSETGGWIGDR-------------KSLVGPGSSPPTCLAK 78
           L+  L  F L    S+SS  S++ G WIG R             K   GPGSSPPTC +K
Sbjct: 11  LLAALVTFALLHLFSASSIVSAD-GRWIGQRTGSDLPGGFIRSNKRFGGPGSSPPTCRSK 70

Query: 79  CGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           CG+C PC+PVHVPIQPGLS+PLEYYPEAWRCKCGNKLFMP
Sbjct: 71  CGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CsGy3G012950 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 112.1 bits (279), Expect = 2.8e-25
Identity = 56/100 (56.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 21  LTLFAFQLASASSSSSSSSSETG---------------GWIGDRKSLVGPGSSPPTCLAK 80
           L ++AF L  +SSS++S    +G               G I D+K L GPGS PP C  K
Sbjct: 8   LIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLK 67

Query: 81  CGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           CG+C PC+ VHVPIQPGL +PLEYYPEAWRCKCGNKLFMP
Sbjct: 68  CGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CsGy3G012950 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 49  RKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           R+ L G GSSPP C +KCGRC PC+PVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of CsGy3G012950 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 49  RKSLVGPGSSPPTCLAKCGRCGPCEPVHVPIQPGLSLPLEYYPEAWRCKCGNKLFMP 106
           R+ L G GSSPP C +KCGRC PC+PVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of CsGy3G012950 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 44.7 bits (104), Expect = 5.5e-05
Identity = 22/47 (46.81%), Postives = 24/47 (51.06%), Query Frame = 0


Query: 56  GSSPPTCLAKCGRCGPCEPVHVPI---QPGLSLP-LEYYPEAWRCKC 99
           GS PP+C  KC  C PCE +  P     P LS     Y PE WRC C
Sbjct: 58  GSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHC 104

The following BLAST results are available for this feature:

BLAST of CsGy3G012950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V3I3	8.5e-27	60.00	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	3.9e-24	56.00	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	1.5e-20	70.18	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9FY19	8.8e-08	41.38	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]
Q7M1E7	1.2e-07	44.90	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]

BLAST of CsGy3G012950 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56945.1	6.17e-73	100.00	hypothetical protein Csa_009821 [Cucumis sativus]	[more]
XP_008438622.1	2.94e-70	94.59	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]	[more]
XP_038905188.1	1.13e-44	72.45	EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]	[more]
XP_010435079.1	2.38e-34	80.95	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Camelina sativa]	[more]
KAG7615994.1	1.06e-33	79.37	hypothetical protein ISN45_At04g015230 [Arabidopsis thaliana x Arabidopsis areno...	[more]

BLAST of CsGy3G012950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4P0	2.99e-73	100.00	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G146...	[more]
A0A1S3AWH2	1.42e-70	94.59	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103483678...	[more]
A0A178V213	5.11e-34	79.37	Epidermal patterning factor-like protein OS=Arabidopsis thaliana OX=3702 GN=AXX1...	[more]
A0A2P5FWC0	9.48e-34	57.27	Epidermal patterning factor-like protein OS=Trema orientale OX=63057 GN=TorRG33x...	[more]
A0A2H5PP20	9.67e-34	84.48	Epidermal patterning factor-like protein OS=Citrus unshiu OX=55188 GN=CUMW_15407...	[more]

BLAST of CsGy3G012950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14723.1	6.0e-28	60.00	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	2.8e-25	56.00	allergen-related	[more]
AT2G30370.1	1.1e-21	70.18	allergen-related	[more]
AT2G30370.2	1.1e-21	70.18	allergen-related	[more]
AT3G13898.1	5.5e-05	46.81	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 55..105 e-value: 6.0E-20 score: 71.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60
None	No IPR available	PANTHER	PTHR33109:SF55	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 29..105
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 29..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G012950.1	CsGy3G012950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region