CsGy3G012790 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G012790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	armadillo repeat-containing protein LFR
Location	Gy14Chr3: 9590802 .. 9593576 (-)
RNA-Seq Expression	CsGy3G012790
Synteny	CsGy3G012790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATTTTGGAGCAGATTGAATCTGCATCTTCGTGCCCTAATTCGATTTCCAGCTTCCCGATTGCCAAAGAATCGGATCGGATCGGATTGCCGTTGCCGTCGCTGAATCATTCGAAGTCCATAGAGAACGAGATAGGCCATGCAGAAGAGAGACCAGAACAAGTTGGGCGGAAATGTTAGTGGTGGCGCATCTGCGCCTCCGGCTAAGCGTGGCCGTCCATTCGGCAGCGTAAACAGCAATGCTGCCGCTGTAGCAGCAGCAGTCGCCGCAGGCACCGAGACCTTGGCTCCATCGACACTCCTTGGCCCTTCTCTTCATATTCATACTTCCTTCGCGGGTCAGTTCATCGAAACCCCTTTTCATTTTCTTTCATAATTTGCGGAAAATCAGCTGAAAGTTCATTCAGTCTTAAAAATTTGTGGTTTAAGTTCAGGCATTTCTTTGATTAAGTTCCATTTTTTATCTTGAAATTAATCGAATCGAGCAGATCAAAACAATAAAAGGATAGTGTTGGCTCTACAGAGTGGATTGAAGAGTGAATTGACGTGGGCACTTAACACTCTCACTCTGCTCTCCTTCAAAGAGAAGGATGATATGCGTAGAGACTCTACTCCTCTGGCTAAAATTCCCGGCTTGCTCGATGCTCTTCTTCAAGTTGTATGTATTACATAAACCTCGCAGCCATTTTCTCGTACTTTCTTTTGTACTGAATATATATGTAATCGAGCTAGCTTTCTATGTACAGAAATTTGAAAGTGGAAAAAGATTAGAACTGTGCTCATAATGTTATGTTTCATTATGCAGATAGATGATTGGCGTGATATAGCACTTCCAAGGGATCTTGTAAAGAAGCAAAGAGTCAGAACATTAGGTGCAAATTCTTCTGTAACAGGGTTTGGGAATGAATTTGAGGCACTGGGTTCAGATGGGTATGCATAAAATGATTATTCGTCCTCGTTTCTTTATGTTTGCCTGGTTAACTGAATATTAATTATAACATAACTTGTGCCTGACAGCCTGAGACCTAGTTCTTCAGTTTCAGAATCAACTGGTCATGCTTCTAAACCATCTTCTCGACCTTGGTGGCTTGAGGAAGATGGACTATTCAATCTGGATGATGAAGGACGAGCAGAAAGACAGCAGTGTGCTGTTTCTGCTTCGAATATCCTCAGGAATTTTTCTTTCATGCCAGAGAATGAATCTATCATGGCTCTACATCGACATACTCTGGAAACAGTGTTTCAATGTATAGAAGATCATGTTACAGGTGAGAAGTTTGTGACCCTAAAGAATACGTGATTAAAGTGTTTCTTTGTAGACGTTTCATGTCATCAGCATGGTTGAAGTTTCAAGTGCTGAATATAAGCATGTTTGTCTGGATTACTGTCTGAAAGCTTTAATTATTGACAGAGGATGAAGAACTCGTCACAAACGCACTAGAGACAATTGTGAATTTAGCCCCGCTCCTTGATCTTCGAATTTTTAGCTCGTTAAAACCATCCTACATCAAAATAACGTGAGAACTTTTATCTACTACTGATCTTTTAGGCTCACCTGAATGTTGATTTCAAGCTAATAGGTTTGCTTTATACTTTTTGGCAGAGAAAAACGTGCAGTCGAAGCTATCATGGGAATGCTGGGATCTGCTGTCAAAGTTTGGCACTGTGCTGCTGCAGAACTACTTGGACGATTGATAATAAATCCTGATAATGAGCCTTTCCTTCTCCCCTTTGTCCCCCAGGTTTATCTCTCTTAAATCCATGTAGCTCCGTTTTTGTTGTATTTTACATGGTAGACCATAATATGGATTCTTTTATTGAATATTATTAGATTCACAAGCGCTTAGTTGATCTAATGAGCATCCCAGCATTGGATGCGCAAGCAGCAGCTGTTGGTGCACTGTATAACCTCGTTGAAGTTAATATGGACTGCAGAATAAAGCTGGCAAGCGAACGATGGTAATTCATTTCACTTTAGACCTCTGTCATTAAAACCATTTGACCTGTATTAGATACTGAAACAATGTGCTGTTTGTTCCTGGGTACTGCAAATTTAAAAAGGGCAATCGATCGACTTCTTAAAGTAATCAAGATGCCTCATCCAGTTCCAGAAATTTGTAGGAAAGCAGCAATGATTTTAGAAAGTCTTGTTTCTGAGCCACAGAACAGGGGGTTGCTCTTGGCATACGAAAATGCATTTGCAGAAATACTCTTCTCCGATGGAAGATATTCCGACACATTCGCTAGAATTTTATATGAACTGACATCCAGACCAAACAATAAAGTTGCTGCTGCTCAAGGTGTATGGGGCATGTGATCAGAAGGGCTCATTCGTCAGCTCGAGATTACTTAGTACTCGCTACTGATTCAAGCGAAGGGCTCATGACAACATCATGACATGTAAATACACCAGCTTATTGATTTATCCACAATTAAAAGAAAGTCTACTAATTTTTAAGGTGTCCATTGGAGTCTGGTTGATATGTAATGTGTATGATTGATATGTGAAGTTTGAAGTACCATTCTTAGATTATAGCTAAAACATATGGTATTTGTAGAAATTGTAACCTTAGTATTGGTTTTTGGTGTATAAACAGTATGTAATATATTTCACTTGTTCGGTCATTTTTCTGATGTGGGGCATAGAAGATGTGCATAAAATGAGAGACGATGCTAGAACATTAAGAACTATTTTATCCCTAAAAGCACCAATAAACTAATAAAAAAAATTAGTGTAAAAAATGTGTCATTTAGAAGAAAGCTAGGAACCAAAGG

mRNA sequence

GACATTTTGGAGCAGATTGAATCTGCATCTTCGTGCCCTAATTCGATTTCCAGCTTCCCGATTGCCAAAGAATCGGATCGGATCGGATTGCCGTTGCCGTCGCTGAATCATTCGAAGTCCATAGAGAACGAGATAGGCCATGCAGAAGAGAGACCAGAACAAGTTGGGCGGAAATGTTAGTGGTGGCGCATCTGCGCCTCCGGCTAAGCGTGGCCGTCCATTCGGCAGCGTAAACAGCAATGCTGCCGCTGTAGCAGCAGCAGTCGCCGCAGGCACCGAGACCTTGGCTCCATCGACACTCCTTGGCCCTTCTCTTCATATTCATACTTCCTTCGCGGATCAAAACAATAAAAGGATAGTGTTGGCTCTACAGAGTGGATTGAAGAGTGAATTGACGTGGGCACTTAACACTCTCACTCTGCTCTCCTTCAAAGAGAAGGATGATATGCGTAGAGACTCTACTCCTCTGGCTAAAATTCCCGGCTTGCTCGATGCTCTTCTTCAAGTTATAGATGATTGGCGTGATATAGCACTTCCAAGGGATCTTGTAAAGAAGCAAAGAGTCAGAACATTAGGTGCAAATTCTTCTGTAACAGGGTTTGGGAATGAATTTGAGGCACTGGGTTCAGATGGCCTGAGACCTAGTTCTTCAGTTTCAGAATCAACTGGTCATGCTTCTAAACCATCTTCTCGACCTTGGTGGCTTGAGGAAGATGGACTATTCAATCTGGATGATGAAGGACGAGCAGAAAGACAGCAGTGTGCTGTTTCTGCTTCGAATATCCTCAGGAATTTTTCTTTCATGCCAGAGAATGAATCTATCATGGCTCTACATCGACATACTCTGGAAACAGTGTTTCAATGTATAGAAGATCATGTTACAGAGGATGAAGAACTCGTCACAAACGCACTAGAGACAATTGTGAATTTAGCCCCGCTCCTTGATCTTCGAATTTTTAGCTCGTTAAAACCATCCTACATCAAAATAACAGAAAAACGTGCAGTCGAAGCTATCATGGGAATGCTGGGATCTGCTGTCAAAGTTTGGCACTGTGCTGCTGCAGAACTACTTGGACGATTGATAATAAATCCTGATAATGAGCCTTTCCTTCTCCCCTTTGTCCCCCAGATTCACAAGCGCTTAGTTGATCTAATGAGCATCCCAGCATTGGATGCGCAAGCAGCAGCTGTTGGTGCACTGTATAACCTCGTTGAAGTTAATATGGACTGCAGAATAAAGCTGGCAAGCGAACGATGGGCAATCGATCGACTTCTTAAAGTAATCAAGATGCCTCATCCAGTTCCAGAAATTTGTAGGAAAGCAGCAATGATTTTAGAAAGTCTTGTTTCTGAGCCACAGAACAGGGGGTTGCTCTTGGCATACGAAAATGCATTTGCAGAAATACTCTTCTCCGATGGAAGATATTCCGACACATTCGCTAGAATTTTATATGAACTGACATCCAGACCAAACAATAAAGTTGCTGCTGCTCAAGGTGTATGGGGCATGTGATCAGAAGGGCTCATTCGTCAGCTCGAGATTACTTAGTACTCGCTACTGATTCAAGCGAAGGGCTCATGACAACATCATGACATGTAAATACACCAGCTTATTGATTTATCCACAATTAAAAGAAAGTCTACTAATTTTTAAGGTGTCCATTGGAGTCTGGTTGATATGTAATGTGTATGATTGATATGTGAAGTTTGAAGTACCATTCTTAGATTATAGCTAAAACATATGGTATTTGTAGAAATTGTAACCTTAGTATTGGTTTTTGGTGTATAAACAGTATGTAATATATTTCACTTGTTCGGTCATTTTTCTGATGTGGGGCATAGAAGATGTGCATAAAATGAGAGACGATGCTAGAACATTAAGAACTATTTTATCCCTAAAAGCACCAATAAACTAATAAAAAAAATTAGTGTAAAAAATGTGTCATTTAGAAGAAAGCTAGGAACCAAAGG

Coding sequence (CDS)

ATGCAGAAGAGAGACCAGAACAAGTTGGGCGGAAATGTTAGTGGTGGCGCATCTGCGCCTCCGGCTAAGCGTGGCCGTCCATTCGGCAGCGTAAACAGCAATGCTGCCGCTGTAGCAGCAGCAGTCGCCGCAGGCACCGAGACCTTGGCTCCATCGACACTCCTTGGCCCTTCTCTTCATATTCATACTTCCTTCGCGGATCAAAACAATAAAAGGATAGTGTTGGCTCTACAGAGTGGATTGAAGAGTGAATTGACGTGGGCACTTAACACTCTCACTCTGCTCTCCTTCAAAGAGAAGGATGATATGCGTAGAGACTCTACTCCTCTGGCTAAAATTCCCGGCTTGCTCGATGCTCTTCTTCAAGTTATAGATGATTGGCGTGATATAGCACTTCCAAGGGATCTTGTAAAGAAGCAAAGAGTCAGAACATTAGGTGCAAATTCTTCTGTAACAGGGTTTGGGAATGAATTTGAGGCACTGGGTTCAGATGGCCTGAGACCTAGTTCTTCAGTTTCAGAATCAACTGGTCATGCTTCTAAACCATCTTCTCGACCTTGGTGGCTTGAGGAAGATGGACTATTCAATCTGGATGATGAAGGACGAGCAGAAAGACAGCAGTGTGCTGTTTCTGCTTCGAATATCCTCAGGAATTTTTCTTTCATGCCAGAGAATGAATCTATCATGGCTCTACATCGACATACTCTGGAAACAGTGTTTCAATGTATAGAAGATCATGTTACAGAGGATGAAGAACTCGTCACAAACGCACTAGAGACAATTGTGAATTTAGCCCCGCTCCTTGATCTTCGAATTTTTAGCTCGTTAAAACCATCCTACATCAAAATAACAGAAAAACGTGCAGTCGAAGCTATCATGGGAATGCTGGGATCTGCTGTCAAAGTTTGGCACTGTGCTGCTGCAGAACTACTTGGACGATTGATAATAAATCCTGATAATGAGCCTTTCCTTCTCCCCTTTGTCCCCCAGATTCACAAGCGCTTAGTTGATCTAATGAGCATCCCAGCATTGGATGCGCAAGCAGCAGCTGTTGGTGCACTGTATAACCTCGTTGAAGTTAATATGGACTGCAGAATAAAGCTGGCAAGCGAACGATGGGCAATCGATCGACTTCTTAAAGTAATCAAGATGCCTCATCCAGTTCCAGAAATTTGTAGGAAAGCAGCAATGATTTTAGAAAGTCTTGTTTCTGAGCCACAGAACAGGGGGTTGCTCTTGGCATACGAAAATGCATTTGCAGAAATACTCTTCTCCGATGGAAGATATTCCGACACATTCGCTAGAATTTTATATGAACTGACATCCAGACCAAACAATAAAGTTGCTGCTGCTCAAGGTGTATGGGGCATGTGA

Protein sequence

MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLHIHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHASKPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVFQCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM*

Homology

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BLAST of CsGy3G012790 vs. ExPASy Swiss-Prot
Match: Q9LS90 (Armadillo repeat-containing protein LFR OS=Arabidopsis thaliana OX=3702 GN=LFR PE=1 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 4.1e-195
Identity = 343/462 (74.24%), Postives = 403/462 (87.23%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKR+  K GGN SGG+S PPAKRGRPFGS ++N+AA AAA AA  + ++PS LLGPSL 
Sbjct: 1   MQKRELGKSGGN-SGGSSGPPAKRGRPFGSTSANSAA-AAAAAAAADAMSPSALLGPSLL 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           +H SF +QNN+RIVLALQSGLKSE+TWALNTLTLLSFKEK+D+RRD  PLAKI GLLDAL
Sbjct: 61  VHNSFVEQNNRRIVLALQSGLKSEVTWALNTLTLLSFKEKEDIRRDVMPLAKIAGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGS---DGLRPSSSVSESTG 180
           L +IDDWRDIALP+DL +  RVRTLG N+SVTGFGNE++AL S    G    SS +E+ G
Sbjct: 121 LLIIDDWRDIALPKDLTRGTRVRTLGTNASVTGFGNEYDALASIQPPGSGIGSSAAEALG 180

Query: 181 HAS--KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHT 240
             S  K  S  WW+EEDGLFNLDDEGR+E+Q CA++ASN++RNFSFMP+NE +MA HRH 
Sbjct: 181 KKSTGKHQSSQWWMEEDGLFNLDDEGRSEKQMCAIAASNVIRNFSFMPDNEVVMAQHRHC 240

Query: 241 LETVFQCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGM 300
           LETVFQCI DH+TEDEELVTN+LETIVNLA L+DLRIFSSLK SYI I EK+AV+A++G+
Sbjct: 241 LETVFQCIHDHMTEDEELVTNSLETIVNLAHLMDLRIFSSLKQSYININEKKAVQAVVGI 300

Query: 301 LGSAVKVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALY 360
           L S+VK W+CAAAELLGRLIINPDNEPF+ P +PQIHKRL+DL+SI A+DAQAAAVGALY
Sbjct: 301 LNSSVKAWNCAAAELLGRLIINPDNEPFISPLIPQIHKRLIDLLSIQAVDAQAAAVGALY 360

Query: 361 NLVEVNMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAY 420
           NLVEVNMDCR+KLASERWA+DRLLKVIK PHPVPE+CRKAAMILE+LVSEPQNRGLLLAY
Sbjct: 361 NLVEVNMDCRLKLASERWAVDRLLKVIKTPHPVPEVCRKAAMILENLVSEPQNRGLLLAY 420

Query: 421 ENAFAEILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 458
           ENAFAE+LF +G+YSD+FARILYELT+R N++VA+A+G+WGM
Sbjct: 421 ENAFAELLFQEGKYSDSFARILYELTARSNSRVASARGIWGM 460

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BLAST of CsGy3G012790 vs. ExPASy Swiss-Prot
Match: Q6YTW6 (Armadillo repeat-containing protein LFR OS=Oryza sativa subsp. japonica OX=39947 GN=LFR PE=1 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 8.3e-180
Identity = 314/448 (70.09%), Postives = 378/448 (84.38%), Query Frame = 0


Query: 11  GNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLHIHTSFADQNN 70
           G   GG  + PAKRGRPFGS   + AA AAA AA  +  AP+ L+GPSL + T+ +DQNN
Sbjct: 10  GKSGGGGGSTPAKRGRPFGSTTGSGAAAAAAAAAIGDAAAPAALVGPSLQVLTALSDQNN 69

Query: 71  KRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVIDDWRDI 130
           KRIVLALQSGLKSE+ WALN LT+LSFKEKDD+RRD+TPLAK+PGLLDALLQVIDDWRDI
Sbjct: 70  KRIVLALQSGLKSEILWALNALTVLSFKEKDDLRRDTTPLAKVPGLLDALLQVIDDWRDI 129

Query: 131 ALPRDLVKKQRVRTLGANSSVTGFGNE-FEALGSDGLRPSSSVSEST-GHASKPSSRPWW 190
           A+P+D  K  RVRTLG N++++GFG+E  E + SD   PS   +++     +K  S  + 
Sbjct: 130 AMPKDHTKPPRVRTLGVNTTLSGFGHENVEKVYSDTTTPSDDQTKTADSTVTKKRSAGFL 189

Query: 191 LEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVFQCIEDHVT 250
            +E+GLFN+DDEGR E+QQCAV+ASNI+RNFSFMPENE++M  HRH LETVFQC+ED  T
Sbjct: 190 FDEEGLFNVDDEGRTEKQQCAVAASNIIRNFSFMPENETVMVQHRHCLETVFQCLEDQNT 249

Query: 251 EDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAA 310
           ED+EL+TN LET+VNLAP+LDLRIFSS KPS+IKITEKRAV+AIMGML S+++VWHCAAA
Sbjct: 250 EDDELITNMLETLVNLAPVLDLRIFSSSKPSFIKITEKRAVQAIMGMLASSIRVWHCAAA 309

Query: 311 ELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKL 370
           EL+GRLIINPDNEPFLLP +PQI+KRLVDL+S+PA+DAQAAA+ ALYN+ EVNMD R+KL
Sbjct: 310 ELIGRLIINPDNEPFLLPAIPQIYKRLVDLLSVPAVDAQAAAISALYNVAEVNMDFRLKL 369

Query: 371 ASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFSDGR 430
           ASERWA+DRLLKV+K PHPVPE+CRKA+MI+ESLVSEPQNR  LL +EN FAEIL S+G+
Sbjct: 370 ASERWAVDRLLKVVKTPHPVPEVCRKASMIVESLVSEPQNRMHLLVHENTFAEILTSEGK 429

Query: 431 YSDTFARILYELTSRPNNKVAAAQGVWG 457
           YSDTFARILYELT+RP+NKV A Q +WG
Sbjct: 430 YSDTFARILYELTARPSNKVTAGQAIWG 457

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BLAST of CsGy3G012790 vs. ExPASy Swiss-Prot
Match: E9Q7E2 (AT-rich interactive domain-containing protein 2 OS=Mus musculus OX=10090 GN=Arid2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-06
Identity = 89/354 (25.14%), Postives = 142/354 (40.11%), Query Frame = 0


Query: 52  STLLGPSLHIHTSFADQNN-KRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPL 111
           S  L  S  +   F   N+  ++VL+L SGL +E+ +A+N  TLLS + K  M+ +  P 
Sbjct: 139 SDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP- 198

Query: 112 AKIPGLLDALLQVIDDWRDIALPRDLVKKQRVRTLGANSSVTG----------FGNEFEA 171
            KI  LL A   V DD                 TLG+ SSV G          F   ++ 
Sbjct: 199 -KIITLLLANAGVFDD-----------------TLGSFSSVFGEEWREKTDRDFVKFWKD 258

Query: 172 LGSDGLRPSSSVSESTGHASKPSSRPWWLEEDGLFN-------LDDEGRAERQQCAVSAS 231
           +  D          +  H   P    W    + LF+        D EG     Q  +  +
Sbjct: 259 IVDDNEVRDLISDRNKAHEDTPGEWIW----ESLFHPPRKLGINDIEG-----QRVLQIA 318

Query: 232 NILRNFSFMPENESIMALHRHTLETVFQCIEDHVTEDEELVTNALETIVNLAP--LLDLR 291
            ILRN SF   N  ++A +R  L  +      H     +L    L+T+ N+A   LLD  
Sbjct: 319 VILRNLSFEESNVKLLAANRTCLRFLLLSAHSHFISLRQL---GLDTLGNIAAELLLDPV 378

Query: 292 IFSSLKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAAELLGRLIINPDNEPFLLPFVPQ- 351
            F +    +  +T+          L S  +       E+LG L    DN   +  +V Q 
Sbjct: 379 DFRTTHLMFHTVTK---------CLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQD 438

Query: 352 IHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKLASERWAIDRLLKVIKM 385
            ++ ++  +++P +    + +  LY L E+      K+A    +ID L+ ++ M
Sbjct: 439 SYREIICHLTLPDVLLVTSTLEVLYMLTEMGDVACTKIAKVEKSIDVLVCLVSM 452

[Close]

BLAST of CsGy3G012790 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 7.2e-06
Identity = 91/353 (25.78%), Postives = 148/353 (41.93%), Query Frame = 0


Query: 52  STLLGPSLHIHTSFADQNN-KRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPL 111
           S  L  S  +   F   N+  ++VL+L SGL +E+ +A+N  TLLS + K  M+ +  P 
Sbjct: 139 SDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP- 198

Query: 112 AKIPGLLDALLQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEF-EALGSDGLRPS 171
            KI  LL A   V DD                 TLG+ S+V  FG E+ E    D ++  
Sbjct: 199 -KIITLLLANAGVFDD-----------------TLGSFSTV--FGEEWKEKTDRDFVKFW 258

Query: 172 SSVSE--------STGHASKPSSRPWWLEEDGLFN-------LDDEGRAERQQCAVSASN 231
             + +        S  + S   +   W+ E  LF+        D EG     Q  +  + 
Sbjct: 259 KDIVDDNEVRDLISDRNKSHEGTSGEWIWE-SLFHPPRKLGINDIEG-----QRVLQIAV 318

Query: 232 ILRNFSFMPENESIMALHRHTLETVFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRI 291
           ILRN SF   N  ++A +R  L  +      H     +L    L+T+ N+A   LLD   
Sbjct: 319 ILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVD 378

Query: 292 FSSLKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAAELLGRLIINPDNEPFLLPFVPQ-I 351
           F +    +  +T+          L S  +       E+LG L    DN   +  +V Q  
Sbjct: 379 FKTTHLMFHTVTK---------CLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDS 438

Query: 352 HKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKLASERWAIDRLLKVIKM 385
           ++ ++  +++P +    + +  LY L E+      K+A    +ID L+ ++ M
Sbjct: 439 YREIICHLTLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCLVSM 452

[Close]

BLAST of CsGy3G012790 vs. NCBI nr
Match: XP_011650953.1 (armadillo repeat-containing protein LFR [Cucumis sativus] >KGN56925.1 hypothetical protein Csa_011345 [Cucumis sativus])

HSP 1 Score: 895 bits (2313), Expect = 0.0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF
Sbjct: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of CsGy3G012790 vs. NCBI nr
Match: XP_008438598.1 (PREDICTED: armadillo repeat-containing protein LFR [Cucumis melo] >KAA0049316.1 armadillo repeat-containing protein LFR [Cucumis melo var. makuwa] >TYK17242.1 armadillo repeat-containing protein LFR [Cucumis melo var. makuwa])

HSP 1 Score: 886 bits (2290), Expect = 0.0
Identity = 453/457 (99.12%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRP SS SESTGHAS
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPGSSASESTGHAS 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPSSR WWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF
Sbjct: 181 KPSSRHWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of CsGy3G012790 vs. NCBI nr
Match: XP_038899743.1 (armadillo repeat-containing protein LFR [Benincasa hispida])

HSP 1 Score: 857 bits (2214), Expect = 1.01e-312
Identity = 436/457 (95.40%), Postives = 441/457 (96.50%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKRDQNKL GNV GG SAPPAKRGRPFGSVNSNAAA AAAVAA  ETLAPS LLGPS H
Sbjct: 1   MQKRDQNKLAGNVGGGTSAPPAKRGRPFGSVNSNAAAAAAAVAAAAETLAPSALLGPSFH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLG+NSSVTGFGNEFEALGS+GLRP SS SESTGHAS
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGSNSSVTGFGNEFEALGSNGLRPGSSASESTGHAS 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPS R WWL+EDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSPRHWWLDEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QCIEDH TEDEELVTNALETIVNLAPLLDLRIFSS KP+YIKITEKRAV+AIMGMLGSAV
Sbjct: 241 QCIEDHCTEDEELVTNALETIVNLAPLLDLRIFSSSKPTYIKITEKRAVQAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDA AAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDASAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of CsGy3G012790 vs. NCBI nr
Match: XP_022979388.1 (armadillo repeat-containing protein LFR-like [Cucurbita maxima])

HSP 1 Score: 838 bits (2164), Expect = 3.48e-305
Identity = 429/457 (93.87%), Postives = 438/457 (95.84%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKR+QNKLGGNV G ASAPPAKRGRPFGSVNSNAAA AAA    +ETLAPS LLGPSLH
Sbjct: 1   MQKREQNKLGGNV-GSASAPPAKRGRPFGSVNSNAAAAAAA----SETLAPSALLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANS +TGFGNEFEALGS+GLRP SS S++TGHA 
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASKATGHAP 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPS R WWL+EDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH+TEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of CsGy3G012790 vs. NCBI nr
Match: XP_023527171.1 (armadillo repeat-containing protein LFR-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 835 bits (2157), Expect = 4.06e-304
Identity = 428/457 (93.65%), Postives = 436/457 (95.40%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKR+QNKLGGNV G ASAPPAKRGRPFGSVNSNAAA AAA     ETLAPS LLGPSLH
Sbjct: 1   MQKREQNKLGGNV-GSASAPPAKRGRPFGSVNSNAAAAAAAA----ETLAPSALLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALP+D VKKQRVRTLGANS +TGFGNEFEALGS+GLRP SS SE+TGHA 
Sbjct: 121 LQVIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAP 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPS R WWL+EDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH+TEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of CsGy3G012790 vs. ExPASy TrEMBL
Match: A0A0A0L4L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144150 PE=4 SV=1)

HSP 1 Score: 895 bits (2313), Expect = 0.0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF
Sbjct: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of CsGy3G012790 vs. ExPASy TrEMBL
Match: A0A5D3D0A8 (Armadillo repeat-containing protein LFR OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00930 PE=4 SV=1)

HSP 1 Score: 886 bits (2290), Expect = 0.0
Identity = 453/457 (99.12%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRP SS SESTGHAS
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPGSSASESTGHAS 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPSSR WWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF
Sbjct: 181 KPSSRHWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of CsGy3G012790 vs. ExPASy TrEMBL
Match: A0A1S3AWW3 (armadillo repeat-containing protein LFR OS=Cucumis melo OX=3656 GN=LOC103483658 PE=4 SV=1)

HSP 1 Score: 886 bits (2290), Expect = 0.0
Identity = 453/457 (99.12%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRP SS SESTGHAS
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPGSSASESTGHAS 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPSSR WWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF
Sbjct: 181 KPSSRHWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of CsGy3G012790 vs. ExPASy TrEMBL
Match: A0A6J1IW20 (armadillo repeat-containing protein LFR-like OS=Cucurbita maxima OX=3661 GN=LOC111479129 PE=4 SV=1)

HSP 1 Score: 838 bits (2164), Expect = 1.69e-305
Identity = 429/457 (93.87%), Postives = 438/457 (95.84%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKR+QNKLGGNV G ASAPPAKRGRPFGSVNSNAAA AAA    +ETLAPS LLGPSLH
Sbjct: 1   MQKREQNKLGGNV-GSASAPPAKRGRPFGSVNSNAAAAAAA----SETLAPSALLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRDIALPRDLVKKQRVRTLGANS +TGFGNEFEALGS+GLRP SS S++TGHA 
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASKATGHAP 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPS R WWL+EDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH+TEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of CsGy3G012790 vs. ExPASy TrEMBL
Match: A0A6J1EDA6 (armadillo repeat-containing protein LFR-like OS=Cucurbita moschata OX=3662 GN=LOC111432138 PE=4 SV=1)

HSP 1 Score: 833 bits (2153), Expect = 8.00e-304
Identity = 426/457 (93.22%), Postives = 436/457 (95.40%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKR+QNKLGGNV G ASAPPAKRGRPFGSVNSNAAA AAA     ETLAPS LLGPSLH
Sbjct: 1   MQKREQNKLGGNV-GSASAPPAKRGRPFGSVNSNAAAAAAAA----ETLAPSALLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPSSSVSESTGHAS 180
           LQVIDDWRD+ALP+D VKKQRVRTLGANS +TGFGNEFEALGS+GLRP SS SE+TGH+ 
Sbjct: 121 LQVIDDWRDVALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHSP 180

Query: 181 KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240
           KPS R WWL+EDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240

Query: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH+TEDEELVTNALETIVNLAPLLDLRIFSS KPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of CsGy3G012790 vs. TAIR 10
Match: AT3G22990.1 (ARM repeat superfamily protein )

HSP 1 Score: 682.2 bits (1759), Expect = 2.9e-196
Identity = 343/462 (74.24%), Postives = 403/462 (87.23%), Query Frame = 0


Query: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60
           MQKR+  K GGN SGG+S PPAKRGRPFGS ++N+AA AAA AA  + ++PS LLGPSL 
Sbjct: 1   MQKRELGKSGGN-SGGSSGPPAKRGRPFGSTSANSAA-AAAAAAAADAMSPSALLGPSLL 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           +H SF +QNN+RIVLALQSGLKSE+TWALNTLTLLSFKEK+D+RRD  PLAKI GLLDAL
Sbjct: 61  VHNSFVEQNNRRIVLALQSGLKSEVTWALNTLTLLSFKEKEDIRRDVMPLAKIAGLLDAL 120

Query: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGS---DGLRPSSSVSESTG 180
           L +IDDWRDIALP+DL +  RVRTLG N+SVTGFGNE++AL S    G    SS +E+ G
Sbjct: 121 LLIIDDWRDIALPKDLTRGTRVRTLGTNASVTGFGNEYDALASIQPPGSGIGSSAAEALG 180

Query: 181 HAS--KPSSRPWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHT 240
             S  K  S  WW+EEDGLFNLDDEGR+E+Q CA++ASN++RNFSFMP+NE +MA HRH 
Sbjct: 181 KKSTGKHQSSQWWMEEDGLFNLDDEGRSEKQMCAIAASNVIRNFSFMPDNEVVMAQHRHC 240

Query: 241 LETVFQCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSLKPSYIKITEKRAVEAIMGM 300
           LETVFQCI DH+TEDEELVTN+LETIVNLA L+DLRIFSSLK SYI I EK+AV+A++G+
Sbjct: 241 LETVFQCIHDHMTEDEELVTNSLETIVNLAHLMDLRIFSSLKQSYININEKKAVQAVVGI 300

Query: 301 LGSAVKVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALY 360
           L S+VK W+CAAAELLGRLIINPDNEPF+ P +PQIHKRL+DL+SI A+DAQAAAVGALY
Sbjct: 301 LNSSVKAWNCAAAELLGRLIINPDNEPFISPLIPQIHKRLIDLLSIQAVDAQAAAVGALY 360

Query: 361 NLVEVNMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAY 420
           NLVEVNMDCR+KLASERWA+DRLLKVIK PHPVPE+CRKAAMILE+LVSEPQNRGLLLAY
Sbjct: 361 NLVEVNMDCRLKLASERWAVDRLLKVIKTPHPVPEVCRKAAMILENLVSEPQNRGLLLAY 420

Query: 421 ENAFAEILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 458
           ENAFAE+LF +G+YSD+FARILYELT+R N++VA+A+G+WGM
Sbjct: 421 ENAFAELLFQEGKYSDSFARILYELTARSNSRVASARGIWGM 460

The following BLAST results are available for this feature:

BLAST of CsGy3G012790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS90	4.1e-195	74.24	Armadillo repeat-containing protein LFR OS=Arabidopsis thaliana OX=3702 GN=LFR P...	[more]
Q6YTW6	8.3e-180	70.09	Armadillo repeat-containing protein LFR OS=Oryza sativa subsp. japonica OX=39947...	[more]
E9Q7E2	3.2e-06	25.14	AT-rich interactive domain-containing protein 2 OS=Mus musculus OX=10090 GN=Arid...	[more]
Q68CP9	7.2e-06	25.78	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of CsGy3G012790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650953.1	0.0	100.00	armadillo repeat-containing protein LFR [Cucumis sativus] >KGN56925.1 hypothetic...	[more]
XP_008438598.1	0.0	99.12	PREDICTED: armadillo repeat-containing protein LFR [Cucumis melo] >KAA0049316.1 ...	[more]
XP_038899743.1	1.01e-312	95.40	armadillo repeat-containing protein LFR [Benincasa hispida]	[more]
XP_022979388.1	3.48e-305	93.87	armadillo repeat-containing protein LFR-like [Cucurbita maxima]	[more]
XP_023527171.1	4.06e-304	93.65	armadillo repeat-containing protein LFR-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G012790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4L4	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144150 PE=4 SV=1	[more]
A0A5D3D0A8	0.0	99.12	Armadillo repeat-containing protein LFR OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AWW3	0.0	99.12	armadillo repeat-containing protein LFR OS=Cucumis melo OX=3656 GN=LOC103483658 ...	[more]
A0A6J1IW20	1.69e-305	93.87	armadillo repeat-containing protein LFR-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EDA6	8.00e-304	93.22	armadillo repeat-containing protein LFR-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CsGy3G012790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22990.1	2.9e-196	74.24	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 197..452 e-value: 5.7E-17 score: 63.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..182
None	No IPR available	PANTHER	PTHR12656:SF13	ARMADILLO REPEAT-CONTAINING PROTEIN LFR-LIKE	coord: 1..457
IPR021906	SWI/SNF-like complex subunit BAF250/Osa	PANTHER	PTHR12656	BRG-1 ASSOCIATED FACTOR 250 BAF250	coord: 1..457
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 107..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G012790.2	CsGy3G012790.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0048366	leaf development
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0035060	brahma complex
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0016514	SWI/SNF complex
molecular_function	GO:0031491	nucleosome binding