CsGy3G012570 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G012570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Alba domain-containing protein
Location	Gy14Chr3: 9447593 .. 9448433 (-)
RNA-Seq Expression	CsGy3G012570
Synteny	CsGy3G012570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAGGCATGGTCGTTTCAGAAGCCGCCCCTGAGGTCAAGAATGAAATCCGAAATGAGGAAGAAAGGCTCCTCGTCGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGGTATTCTTATTCCTGAAGATCTTCTGTTGAATCAACTTCTTTGTTAAGGTTTCCAAATCATGATTGCTTTGATGTTTTCATATGTTGCAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGGTATGAGTTCTTGAATCCTTTTTTTTTTTTTCATAATTGGTTTGTAGTTGGATGTTCATAACTGGGATGAGTTCCATTCATTCGTTCATTGTACAGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAGTAAGAAATTTGTTCGAACCTATTGGCCATTTTAATTTGTTTTTTATTTTTATTTTTTATGGGAATAAGGCACTCTCTAAACATGATTTATTATTTGGAAATTTCTGCAGAGTTGATGATATCTTCTGTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGGTCACTGCTTATTAATAGAAACTATGTCTGATTTATTGTGCAATTTTTGGACGTTTCTTTGGCTTAATGATGTATTCTTTTATCTGTTTTCCTAGATTGAGATTGCATTGGTAAACGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA

mRNA sequence

ATGGATTCAGGCATGGTCGTTTCAGAAGCCGCCCCTGAGGTCAAGAATGAAATCCGAAATGAGGAAGAAAGGCTCCTCGTCGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGATGATATCTTCTGTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAACGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA

Coding sequence (CDS)

ATGGATTCAGGCATGGTCGTTTCAGAAGCCGCCCCTGAGGTCAAGAATGAAATCCGAAATGAGGAAGAAAGGCTCCTCGTCGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGATGATATCTTCTGTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAACGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA

Protein sequence

MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS*

Homology

[Close]

BLAST of CsGy3G012570 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 105 KLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSE 148
           K+M S+V +K+   G+ V K KIEI LV +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of CsGy3G012570 vs. NCBI nr
Match: XP_004134424.1 (uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical protein Csa_011451 [Cucumis sativus])

HSP 1 Score: 277 bits (709), Expect = 1.24e-93
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. NCBI nr
Match: XP_008438573.1 (PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK17261.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (677), Expect = 9.40e-89
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK L ISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. NCBI nr
Match: XP_038877187.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 253 bits (647), Expect = 3.52e-84
Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSE  PEVKNEIR+EEE+LLV A D EVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEGTPEVKNEIRSEEEKLLVVANDGEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK L ISSVSLK GEN K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKTLTISSVSLKKGENDK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. NCBI nr
Match: XP_022980835.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 244 bits (624), Expect = 1.13e-80
Identity = 132/149 (88.59%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSEA  EVKNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK L ISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. NCBI nr
Match: XP_022924600.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244 bits (622), Expect = 2.28e-80
Identity = 131/149 (87.92%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSEA  E+KNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK L ISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. ExPASy TrEMBL
Match: A0A0A0L8F8 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 6.01e-94
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. ExPASy TrEMBL
Match: A0A5D3CZ81 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001140 PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 4.55e-89
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK L ISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. ExPASy TrEMBL
Match: A0A1S3AXD3 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 4.55e-89
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK L ISSVSLKNGENGK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIALVNAEKIKNISTAPTSEDS
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. ExPASy TrEMBL
Match: A0A6J1IXN8 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111480105 PE=4 SV=1)

HSP 1 Score: 244 bits (624), Expect = 5.46e-81
Identity = 132/149 (88.59%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSEA  EVKNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK L ISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. ExPASy TrEMBL
Match: A0A6J1EFH1 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111432040 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.10e-80
Identity = 131/149 (87.92%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSEA  E+KNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK L ISSVSLKNGEN +
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149
           LVMKPKIEIAL+NAEK+K ISTA TSEDS
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CsGy3G012570 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.4e-27
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 105 KLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSE 148
           K+M S+V +K+   G+ V K KIEI LV +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of CsGy3G012570 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.4e-27
Identity = 65/118 (55.08%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 23  ERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALG 82
           ER +V AP +      V T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALG
Sbjct: 16  ERNIVLAPATTTTTATVETH---KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALG 75

Query: 83  MAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNI 141
           MAI TVVTI+EILK NGLA +KK++ S+V +K+   GK+V K KIEI L  ++K  ++
Sbjct: 76  MAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSL 130

[Close]

BLAST of CsGy3G012570 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-26
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEK 77

Query: 105 KLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSE 148
           K+M S+V +K+   G+ V K KIEI L  +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

The following BLAST results are available for this feature:

BLAST of CsGy3G012570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	1.3e-25	57.28	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of CsGy3G012570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134424.1	1.24e-93	100.00	uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical pro...	[more]
XP_008438573.1	9.40e-89	95.30	PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 a...	[more]
XP_038877187.1	3.52e-84	91.95	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]
XP_022980835.1	1.13e-80	88.59	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
XP_022924600.1	2.28e-80	87.92	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 unch...	[more]

BLAST of CsGy3G012570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8F8	6.01e-94	100.00	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 S...	[more]
A0A5D3CZ81	4.55e-89	95.30	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AXD3	4.55e-89	95.30	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 P...	[more]
A0A6J1IXN8	5.46e-81	88.59	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114801...	[more]
A0A6J1EFH1	1.10e-80	87.92	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CsGy3G012570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34160.1	9.4e-27	57.28	Alba DNA/RNA-binding protein	[more]
AT3G04620.1	9.4e-27	55.08	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	3.6e-26	56.31	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 48..100 e-value: 7.8E-11 score: 41.6
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 46..149 e-value: 4.8E-37 score: 128.4
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 48..137
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 11..146
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 11..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G012570.2	CsGy3G012570.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding