CsGy3G011840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G011840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	multiple organellar RNA editing factor 2, chloroplastic
Location	Gy14Chr3: 9053561 .. 9056933 (+)
RNA-Seq Expression	CsGy3G011840
Synteny	CsGy3G011840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATGTTACTGTATAATTAATAATTATTTCCAAAACTACTAGAGAATATTTAATCCAAATATAAATAATTAAGTGAAAATTAAACAATATTGGGCCGTGAAGGTCTGAAAGACAGGCCCAATAAAAAGCAAAGAAACTCCTCACAAGGAGACGGAGCCTTCATCTATTAAAACCCTCGAAACCCCATAGCTTCATCCACATTTCCATTTTCATTAACCCTTTCTCTCTCTCGCCGGCTATGGGGTTATCCCTTCTACGAGCCATGACCTCCGCCTCCGTATCCACCTCCGCCGCTCGCCTCTCTATCCTTCCCAGACGCCTCTTCTCCTCCTCGTCTACTCTTACACATCCTACTTCGCCTTCTTCTTTCACTCTCCGCCGTCGATCTCTCCCTCTGCTTTCCCATGCCGTTCGATCTATCCCTTCCACCTCCAGGTTCGACTCGTTGCGTTGCTTTTCCTCTAGGCCTGGTAACTCCTCTTACTCTCCCCTTAACTCTAATTCCAACTTCAATGAACGTCCTCCCACTGAGATGGCGCCTCTTTTCCCTGGATGTGACTACGAGCACTGGCTCATTGTCATGGACAAACCTGGTGGTGAGGGTGCCACCAAGCAGCAGATGATTGATTGCTATATTCAGACTCTTGCTAAAATTGTTGGCAGGTACTGTTTTTTTTTTATTATTATGTGATGATTTTATTCTTCCTGACTTTTTTGCGCGTGGGTTCTGATTTGATTTTGTCCCTTTTTGTGTTTTGAGCAGTGAAGAGGAAGCAAAGAAGAGGATTTATAATGTTTCTTGCGAGAGGTATTTTGGATTTGGCTGTGAGTTGGATGAAGAGACCTCCAACAAGCTCGAAGGTCTGTGTGATGTTTTGAGGTCAAGTGTAGACAGTTTTCTAAGGCATTGATAAGTATTTGATGTTTTTTGTTTCAATCTTTCTGAACAGGTTTGCCAGGTGTTCTGTTTGTTCTTCCTGATTCTTATGTCGACCCAGAGTATAAAGACTATGGGGGTAAAAATCTTACTAAAATTTTTCATTGTGGAGATGAAACATAATTCCATTCCGGCCTATACTACACTAACATTCATTTGAACATACTATGTTATATTATATTGGCCTGTTTACGCATTGTTGTAACCGTAAAGTCCATCTTGGCAAAACTATTTCAGTCTCTTAGACTATGTTTAGTTTTGAATGCTAATGGACTGACAATAAATGTCACTCTTGACTGTCCTGCACTTTATATTTTTTCTGGAGACGCAGGTCAGTAGAGTTGAAACATTATTTATGTTTAGCACTGCATTGAGATGTGTGTTCTAACTATAATAGTCCTTCTCCTTATTATTGTGTTCATATTTTGTATATATTATCTTGACATGTTAAAAGGTGCAAGAAGCATGAACTGTGGATGCAAACAGGACAAGCTAGGATAAAATCCATCTTAGCATAGGCAAATCTTTCATTTAGGCAGTATTTAGTTTTGAATGCTAAAGGACTCGCATCAACTGCACTGTAGACTGTTGTGAGTCTTACTTGTATTGTGGGGATTCAGGTCAATAGAGACATACATTGATTATGTGGATATTAATGAAAGGGTTACAGTCCATCTTGGCAAATCTAAATTAGTCCTATGGACAATGTTTAGCTTTGAATGCTAATGGACTTACAACAAATGTCTCTCTAGACTGTTCTGTGCTCTTTAATTCTTTGTGGAGATGCAGATCAGTAGAGATGAAACATTAATGTCCGAGTACAATGTCTTTGAAGAATATATAATAATTTACTGTGACAGTATGGAAAAGTTTTTGAAGATAAGTGATTGATTGTTGAACGTGTACAGTCCATCTTGGCAAAGCTAAACTAGTCTTTGACAATGTTTAGTTTTGAATGCTAATGGACTTACATCAAATGTCTCTCTTGACTGTTCTGTGCTCTTTTTACTTTGTAGAGATGCAGATCAGTAGAGATGAAACATTAAAGATCGTTTAAGTCTATATTCACAGTGTTTAGTTTTTATCTAAATTATGCCAAATACAGTTGTTTTCTTGCATGGCATATTCGTTAGTAGTTGAAGATGAAGCTTGTGGTTGAAAGTATGAACGAGAATGAGATCTTTTTCTCCAACTGGTTATTTAATTAATGTATATAGTCCATCTTGGCAAACCTAAATCAGTCTTCAAGACAATGTTTAGTTTTGAATGCTAATGGACTTACAGCAAATGTCTCTCTTAAACTGTTCTGTGCTCTTTATACATTGTAGAGATGCAGATCAGTAGAGAAGAAACATCCAATCTTTCTAATAATGTTTTAAAGTTTTATGATTGCAGTGATTACTTTTCAACGCTGATGAATTGTAACAAATAGCTTTCTAGTACATCTTATATATTTGGTGGAGTTGGGAATATCTTTTTCACCTAATACCATGATTTCGTTCATAGAAACCATCTCAACTCATGGACCCTAATTTTGATTGCTCATATTTCCCTTTGTTAGTAGTTCATATATGATAAGTGTCCTAATGATTATGCTAACCCCATTGATTATGCTGGGTGCAGCTGAGTTGTTGGTGAATGGAGAGATTGTTCAAAGGTCACCGGAGAGACAGAGAAGGGTGCAGCCACAGCCTCAGAGAGCTAATGATAGACCAAAATATACAGACAGGACCCGCTATGTGCGACGCAGAGAGAATATGTCTTGATGCACTTGAGACATTGAGGAAATGTGCACATATGACTTAAGGGAAAGGGAATGTCGAATATCTGGGAAGGCGAAAAGGACAACTTAATACAATTAAAAACATTAAACTGAAAGTTAAAGTAATTTGGTACGTGAAAGAGTGGTGTTCAGTAGATGTTAACTTTTGTGTTAATGAACTGCATAAATGTGTATGTGGGCTTGTCGCAGTCTACCTAGTTAATGTTCATCGACTTTGGTGTAGTTGTAAAACCGTGCACATCTAAATTTGATAAGAACCAATCTTGTTATTCTTTGGCACTGTATGTTTTTCTGTAGTGGGCTTTTGATCCTTTAGGGGAAGGTTAGACATAGCCTAATTCAAAGGCTTTGTACTTCCAGTTTTATTTTTGGTCAAGCTACAATCTAACCTTCATGAAAATTTAATAACGAAATTGTCTTTTATCTTTAGTTTTGAAATTGTCTTTTATTTTAAATCTATTCCCAAGACTATCTTTTTAAGTTACTGCCCCCAAATTTCAATAGTTTTTTTTCTATTTCATATGAAAGATTTGAACCTTTTTTCATTATGTGAGAATAGTATATCTGCCCATGAATTTGACAACCCAAGTAATTCACATTATAGAAACTAAAATAGTTGGATTGGGTTAATCTTGTTCAATGTCTAATGCC

mRNA sequence

AAAAATGTTACTGTATAATTAATAATTATTTCCAAAACTACTAGAGAATATTTAATCCAAATATAAATAATTAAGTGAAAATTAAACAATATTGGGCCGTGAAGGTCTGAAAGACAGGCCCAATAAAAAGCAAAGAAACTCCTCACAAGGAGACGGAGCCTTCATCTATTAAAACCCTCGAAACCCCATAGCTTCATCCACATTTCCATTTTCATTAACCCTTTCTCTCTCTCGCCGGCTATGGGGTTATCCCTTCTACGAGCCATGACCTCCGCCTCCGTATCCACCTCCGCCGCTCGCCTCTCTATCCTTCCCAGACGCCTCTTCTCCTCCTCGTCTACTCTTACACATCCTACTTCGCCTTCTTCTTTCACTCTCCGCCGTCGATCTCTCCCTCTGCTTTCCCATGCCGTTCGATCTATCCCTTCCACCTCCAGGTTCGACTCGTTGCGTTGCTTTTCCTCTAGGCCTGGTAACTCCTCTTACTCTCCCCTTAACTCTAATTCCAACTTCAATGAACGTCCTCCCACTGAGATGGCGCCTCTTTTCCCTGGATGTGACTACGAGCACTGGCTCATTGTCATGGACAAACCTGGTGGTGAGGGTGCCACCAAGCAGCAGATGATTGATTGCTATATTCAGACTCTTGCTAAAATTGTTGGCAGTGAAGAGGAAGCAAAGAAGAGGATTTATAATGTTTCTTGCGAGAGGTATTTTGGATTTGGCTGTGAGTTGGATGAAGAGACCTCCAACAAGCTCGAAGGTTTGCCAGGTGTTCTGTTTGTTCTTCCTGATTCTTATGTCGACCCAGAGTATAAAGACTATGGGGCTGAGTTGTTGGTGAATGGAGAGATTGTTCAAAGGTCACCGGAGAGACAGAGAAGGGTGCAGCCACAGCCTCAGAGAGCTAATGATAGACCAAAATATACAGACAGGACCCGCTATGTGCGACGCAGAGAGAATATGTCTTGATGCACTTGAGACATTGAGGAAATGTGCACATATGACTTAAGGGAAAGGGAATGTCGAATATCTGGGAAGGCGAAAAGGACAACTTAATACAATTAAAAACATTAAACTGAAAGTTAAAGTAATTTGGTACGTGAAAGAGTGGTGTTCAGTAGATGTTAACTTTTGTGTTAATGAACTGCATAAATGTGTATGTGGGCTTGTCGCAGTCTACCTAGTTAATGTTCATCGACTTTGGTGTAGTTGTAAAACCGTGCACATCTAAATTTGATAAGAACCAATCTTGTTATTCTTTGGCACTGTATGTTTTTCTGTAGTGGGCTTTTGATCCTTTAGGGGAAGGTTAGACATAGCCTAATTCAAAGGCTTTGTACTTCCAGTTTTATTTTTGGTCAAGCTACAATCTAACCTTCATGAAAATTTAATAACGAAATTGTCTTTTATCTTTAGTTTTGAAATTGTCTTTTATTTTAAATCTATTCCCAAGACTATCTTTTTAAGTTACTGCCCCCAAATTTCAATAGTTTTTTTTCTATTTCATATGAAAGATTTGAACCTTTTTTCATTATGTGAGAATAGTATATCTGCCCATGAATTTGACAACCCAAGTAATTCACATTATAGAAACTAAAATAGTTGGATTGGGTTAATCTTGTTCAATGTCTAATGCC

Coding sequence (CDS)

ATGGGGTTATCCCTTCTACGAGCCATGACCTCCGCCTCCGTATCCACCTCCGCCGCTCGCCTCTCTATCCTTCCCAGACGCCTCTTCTCCTCCTCGTCTACTCTTACACATCCTACTTCGCCTTCTTCTTTCACTCTCCGCCGTCGATCTCTCCCTCTGCTTTCCCATGCCGTTCGATCTATCCCTTCCACCTCCAGGTTCGACTCGTTGCGTTGCTTTTCCTCTAGGCCTGGTAACTCCTCTTACTCTCCCCTTAACTCTAATTCCAACTTCAATGAACGTCCTCCCACTGAGATGGCGCCTCTTTTCCCTGGATGTGACTACGAGCACTGGCTCATTGTCATGGACAAACCTGGTGGTGAGGGTGCCACCAAGCAGCAGATGATTGATTGCTATATTCAGACTCTTGCTAAAATTGTTGGCAGTGAAGAGGAAGCAAAGAAGAGGATTTATAATGTTTCTTGCGAGAGGTATTTTGGATTTGGCTGTGAGTTGGATGAAGAGACCTCCAACAAGCTCGAAGGTTTGCCAGGTGTTCTGTTTGTTCTTCCTGATTCTTATGTCGACCCAGAGTATAAAGACTATGGGGCTGAGTTGTTGGTGAATGGAGAGATTGTTCAAAGGTCACCGGAGAGACAGAGAAGGGTGCAGCCACAGCCTCAGAGAGCTAATGATAGACCAAAATATACAGACAGGACCCGCTATGTGCGACGCAGAGAGAATATGTCTTGA

Protein sequence

MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRENMS*

Homology

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BLAST of CsGy3G011840 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.3e-86
Identity = 162/218 (74.31%), Postives = 180/218 (82.57%), Query Frame = 0


Query: 24  LPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLRCFSSRPGNSSYS 83
           L R L S+ + +  P  PSS          + +    +  ++RF S+RC ++R G S+YS
Sbjct: 11  LTRALLSNVTLMAPPRIPSS----------VHYGGSRLGCSTRFFSIRCGANRSG-STYS 70

Query: 84  PLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKIVGSE 143
           PLNS SNF++RPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAK+VGSE
Sbjct: 71  PLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE 130

Query: 144 EEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELLVNG 203
           EEAKKRIYNVSCERY GFGCE+DEETS KLEGLPGVLFVLPDSYVDPE KDYGAEL VNG
Sbjct: 131 EEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNG 190

Query: 204 EIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRREN 242
           EIVQRSPERQRRV+PQPQRA DRP+Y DRTRY RRREN
Sbjct: 191 EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRREN 217

[Close]

BLAST of CsGy3G011840 vs. ExPASy Swiss-Prot
Match: Q9C7Y2 (Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF5 PE=1 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 7.8e-84
Identity = 164/236 (69.49%), Postives = 189/236 (80.08%), Query Frame = 0


Query: 9   MTSASVSTSAARLSILPRRLFSSSSTLTHPTSPS-SFTLRRRSLPLLSHAVRSIPSTSRF 68
           M      ++A+R++   +RL S+S      T+PS S+ L RRS P+ SHAV  I S +RF
Sbjct: 1   MAKTLARSTASRIT---KRLISTSGA----TTPSPSYILSRRSTPVFSHAVGFISSLNRF 60

Query: 69  DSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQ 128
            ++R    R G  SYSPL S SNF++R PTEMAPLFPGCDYEHWLIVMDKPGGE ATKQQ
Sbjct: 61  TTIRTRMDRSG-GSYSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQ 120

Query: 129 MIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSY 188
           MIDCY+QTLAKI+GSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGVLF+LPDSY
Sbjct: 121 MIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSY 180

Query: 189 VDPEYKDYGAELLVNGEIVQRSPERQRR-VQPQPQRANDRPKYTDRTRYVRRRENM 243
           VD E KDYGAEL VNGEIVQR PERQR+ ++   QR ND+PKY D+TRYVRRRENM
Sbjct: 181 VDQENKDYGAELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENM 228

[Close]

BLAST of CsGy3G011840 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.0e-83
Identity = 157/227 (69.16%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 17  SAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLRCFSSR 76
           S +  S + +R FS+S+ +  P+   S  + RR  P + HAV  IP+ +RF ++R    R
Sbjct: 6   SRSTASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRTRMDR 65

Query: 77  PGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTL 136
            G  SYSPL S SNF++RPPTEMAPLFPGCDYEHWLIVM+KPGGE A KQQMIDCY+QTL
Sbjct: 66  SG-GSYSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTL 125

Query: 137 AKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYG 196
           AKIVGSEEEA+K+IYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE+KDYG
Sbjct: 126 AKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYG 185

Query: 197 AELLVNGEIVQRSPERQRR-VQPQPQRANDRPKYTDRTRYVRRRENM 243
           AEL VNGE+V R PERQRR V+   QR +D+PKY DR R VRRRENM
Sbjct: 186 AELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENM 231

[Close]

BLAST of CsGy3G011840 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 101/238 (42.44%), Postives = 139/238 (58.40%), Query Frame = 0


Query: 12  ASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLR 71
           A +ST     ++L + L  SSST    + P+  +  R ++PL+        S+SR     
Sbjct: 2   ALISTRRTLSTLLNKTL--SSSTSYSSSFPTLSSRSRFAMPLIEKV-----SSSRTSLGP 61

Query: 72  CF-SSRP--GNSSYSPLNSNS-NFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQ 131
           C+ S+RP    S YSPLN  S N++ RPP E   L  GCDYEHWLIVM+    +  T+++
Sbjct: 62  CYISTRPKTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEE 121

Query: 132 MIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSY 191
           MI+ Y++TL  ++G EEEAKK+IY+V    Y GFG  + EE S K++ LPGVL+VLPDSY
Sbjct: 122 MINSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSY 181

Query: 192 VDPEYKDYGAELLVNGEIVQRSPER---QRRVQPQPQRANDRPKYTDRTRYVRRRENM 243
           +D   KDYG +L V G+++ R   R   QR  +P+P           R RY RRRE M
Sbjct: 182 LDVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----------RPRYDRRRETM 219

[Close]

BLAST of CsGy3G011840 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-33
Identity = 95/224 (42.41%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 21  LSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLL----SHAVRSIPSTSRFDSLRCFSSR 80
           LS+LP+ L  +S TL    +P    L   SL  L     H ++S   ++ + ++R  +  
Sbjct: 6   LSLLPKTLTPNSKTL----APLLSILSTSSLSFLPCTRPHPIKS--RSAAYPTVRALTD- 65

Query: 81  PGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTL 140
            G  S    N+N+N  E   T M    PGCDY HWLIVM+ P     T++QMID Y+ TL
Sbjct: 66  -GEYSSRRNNNNNNSGEERETIM---LPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTL 125

Query: 141 AKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYG 200
           A ++GS EEAKK +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D + KDYG
Sbjct: 126 ATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYG 185

Query: 201 AELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 241
            +  VNGEI+   P +    QP+  R++   KY  +  YVR+R+
Sbjct: 186 GDKYVNGEII---PCQYPTYQPKQSRSS---KYKSKA-YVRQRD 211

[Close]

BLAST of CsGy3G011840 vs. NCBI nr
Match: XP_004134048.1 (multiple organellar RNA editing factor 2, chloroplastic [Cucumis sativus] >KGN56832.1 hypothetical protein Csa_011557 [Cucumis sativus])

HSP 1 Score: 470 bits (1210), Expect = 6.51e-167
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS
Sbjct: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

Query: 241 NMS 243
           NMS
Sbjct: 241 NMS 243

[Close]

BLAST of CsGy3G011840 vs. NCBI nr
Match: XP_008438483.1 (PREDICTED: multiple organellar RNA editing factor 2, chloroplastic [Cucumis melo] >TYK17331.1 multiple organellar RNA editing factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 451 bits (1160), Expect = 2.73e-159
Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           MGLSLLRAM SASVSTSAARLS+LPRRLFSSSSTLTHP SPSSFTLRRRSLPLLSHAVRS
Sbjct: 1   MGLSLLRAMASASVSTSAARLSVLPRRLFSSSSTLTHPPSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPS+SR  S RC SSRPGNSSYSPLNSNSNF+ERPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSSSRSTSFRCLSSRPGNSSYSPLNSNSNFSERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK+VGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

Query: 241 NMS 243
           NM+
Sbjct: 241 NMT 243

[Close]

BLAST of CsGy3G011840 vs. NCBI nr
Match: XP_022149612.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 406 bits (1044), Expect = 1.30e-141
Identity = 207/242 (85.54%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           M LSLLRAM SAS STS ARLS+LP+RL SSS+TLT P SP + TL RRSLP LSHAVRS
Sbjct: 1   MALSLLRAMASASASTSTARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPS SRF  +RC  +R GNS YSPLNSNSNF++RPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK+VGSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEG+PGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAEL VNGEIVQRSPERQRRV+PQPQRA DRP+Y DRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NM 242
           NM
Sbjct: 241 NM 242

[Close]

BLAST of CsGy3G011840 vs. NCBI nr
Match: XP_038896418.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 403 bits (1035), Expect = 3.28e-140
Identity = 212/243 (87.24%), Postives = 221/243 (90.95%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSA--ARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAV 60
           M LSLLRAM SAS S SA  ARLS+L RRLFSSSSTLTHP S  S TL RRSLP LSHAV
Sbjct: 1   MALSLLRAMASASPSASAYTARLSLLQRRLFSSSSTLTHPPSLPSLTLCRRSLPPLSHAV 60

Query: 61  RSIPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKP 120
           RSIPS SRF S+RC  +R GNSSYSPLNSNSNF++RPPTEMAPLFPGCDYEHWLIVMDKP
Sbjct: 61  RSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP 120

Query: 121 GGEGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPG 180
           GGEGATKQQMIDCYIQTLAK+VGSEEEAKK+IYNVSCERYFGFGCELDEETSNKLEGLPG
Sbjct: 121 GGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPG 180

Query: 181 VLFVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRR 240
           VLFVLPDSYVDPEYKDYGAEL VNGEIVQR PERQRRV+PQPQRA DRP+Y DRTRYVRR
Sbjct: 181 VLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQRRVEPQPQRAQDRPRYNDRTRYVRR 240

[Close]

BLAST of CsGy3G011840 vs. NCBI nr
Match: XP_022924432.1 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_023527331.1 multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388 bits (996), Expect = 2.15e-134
Identity = 201/242 (83.06%), Postives = 216/242 (89.26%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           M LS+LRAM S       ARLS+L RRLFSSS+TLTHP SP S TL RRSLP LSHAVRS
Sbjct: 1   MALSVLRAMGS------TARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
            PS SR+ S+RC  +R GNSSYSP NSNSNF++RPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  NPSASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK++GSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPE KDYGAEL VNGEIVQRSPERQRRV+PQPQRA DRP+Y DRTR+VRRRE
Sbjct: 181 FVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRE 236

Query: 241 NM 242
           NM
Sbjct: 241 NM 236

[Close]

BLAST of CsGy3G011840 vs. ExPASy TrEMBL
Match: A0A0A0L878 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134800 PE=4 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 3.15e-167
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS
Sbjct: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

Query: 241 NMS 243
           NMS
Sbjct: 241 NMS 243

[Close]

BLAST of CsGy3G011840 vs. ExPASy TrEMBL
Match: A0A5D3CZF4 (Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001860 PE=4 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 1.32e-159
Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           MGLSLLRAM SASVSTSAARLS+LPRRLFSSSSTLTHP SPSSFTLRRRSLPLLSHAVRS
Sbjct: 1   MGLSLLRAMASASVSTSAARLSVLPRRLFSSSSTLTHPPSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPS+SR  S RC SSRPGNSSYSPLNSNSNF+ERPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSSSRSTSFRCLSSRPGNSSYSPLNSNSNFSERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK+VGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

Query: 241 NMS 243
           NM+
Sbjct: 241 NMT 243

[Close]

BLAST of CsGy3G011840 vs. ExPASy TrEMBL
Match: A0A1S3AW51 (multiple organellar RNA editing factor 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483566 PE=4 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 1.32e-159
Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           MGLSLLRAM SASVSTSAARLS+LPRRLFSSSSTLTHP SPSSFTLRRRSLPLLSHAVRS
Sbjct: 1   MGLSLLRAMASASVSTSAARLSVLPRRLFSSSSTLTHPPSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPS+SR  S RC SSRPGNSSYSPLNSNSNF+ERPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSSSRSTSFRCLSSRPGNSSYSPLNSNSNFSERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK+VGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

Query: 241 NMS 243
           NM+
Sbjct: 241 NMT 243

[Close]

BLAST of CsGy3G011840 vs. ExPASy TrEMBL
Match: A0A6J1D8H1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111017993 PE=4 SV=1)

HSP 1 Score: 406 bits (1044), Expect = 6.28e-142
Identity = 207/242 (85.54%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           M LSLLRAM SAS STS ARLS+LP+RL SSS+TLT P SP + TL RRSLP LSHAVRS
Sbjct: 1   MALSLLRAMASASASTSTARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPS SRF  +RC  +R GNS YSPLNSNSNF++RPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK+VGSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEG+PGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAEL VNGEIVQRSPERQRRV+PQPQRA DRP+Y DRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NM 242
           NM
Sbjct: 241 NM 242

[Close]

BLAST of CsGy3G011840 vs. ExPASy TrEMBL
Match: A0A6J1E8X5 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431937 PE=4 SV=1)

HSP 1 Score: 388 bits (996), Expect = 1.04e-134
Identity = 201/242 (83.06%), Postives = 216/242 (89.26%), Query Frame = 0


Query: 1   MGLSLLRAMTSASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRS 60
           M LS+LRAM S       ARLS+L RRLFSSS+TLTHP SP S TL RRSLP LSHAVRS
Sbjct: 1   MALSVLRAMGS------TARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRS 60

Query: 61  IPSTSRFDSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGG 120
            PS SR+ S+RC  +R GNSSYSP NSNSNF++RPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  NPSASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAK++GSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240
           FVLPDSYVDPE KDYGAEL VNGEIVQRSPERQRRV+PQPQRA DRP+Y DRTR+VRRRE
Sbjct: 181 FVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRE 236

Query: 241 NM 242
           NM
Sbjct: 241 NM 236

[Close]

BLAST of CsGy3G011840 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 320.9 bits (821), Expect = 9.1e-88
Identity = 162/218 (74.31%), Postives = 180/218 (82.57%), Query Frame = 0


Query: 24  LPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLRCFSSRPGNSSYS 83
           L R L S+ + +  P  PSS          + +    +  ++RF S+RC ++R G S+YS
Sbjct: 11  LTRALLSNVTLMAPPRIPSS----------VHYGGSRLGCSTRFFSIRCGANRSG-STYS 70

Query: 84  PLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKIVGSE 143
           PLNS SNF++RPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAK+VGSE
Sbjct: 71  PLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE 130

Query: 144 EEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELLVNG 203
           EEAKKRIYNVSCERY GFGCE+DEETS KLEGLPGVLFVLPDSYVDPE KDYGAEL VNG
Sbjct: 131 EEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNG 190

Query: 204 EIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRREN 242
           EIVQRSPERQRRV+PQPQRA DRP+Y DRTRY RRREN
Sbjct: 191 EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRREN 217

[Close]

BLAST of CsGy3G011840 vs. TAIR 10
Match: AT1G32580.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 311.6 bits (797), Expect = 5.5e-85
Identity = 164/236 (69.49%), Postives = 189/236 (80.08%), Query Frame = 0


Query: 9   MTSASVSTSAARLSILPRRLFSSSSTLTHPTSPS-SFTLRRRSLPLLSHAVRSIPSTSRF 68
           M      ++A+R++   +RL S+S      T+PS S+ L RRS P+ SHAV  I S +RF
Sbjct: 1   MAKTLARSTASRIT---KRLISTSGA----TTPSPSYILSRRSTPVFSHAVGFISSLNRF 60

Query: 69  DSLRCFSSRPGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQ 128
            ++R    R G  SYSPL S SNF++R PTEMAPLFPGCDYEHWLIVMDKPGGE ATKQQ
Sbjct: 61  TTIRTRMDRSG-GSYSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQ 120

Query: 129 MIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSY 188
           MIDCY+QTLAKI+GSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGVLF+LPDSY
Sbjct: 121 MIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSY 180

Query: 189 VDPEYKDYGAELLVNGEIVQRSPERQRR-VQPQPQRANDRPKYTDRTRYVRRRENM 243
           VD E KDYGAEL VNGEIVQR PERQR+ ++   QR ND+PKY D+TRYVRRRENM
Sbjct: 181 VDQENKDYGAELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENM 228

[Close]

BLAST of CsGy3G011840 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 309.7 bits (792), Expect = 2.1e-84
Identity = 157/227 (69.16%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 17  SAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLRCFSSR 76
           S +  S + +R FS+S+ +  P+   S  + RR  P + HAV  IP+ +RF ++R    R
Sbjct: 6   SRSTASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRTRMDR 65

Query: 77  PGNSSYSPLNSNSNFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTL 136
            G  SYSPL S SNF++RPPTEMAPLFPGCDYEHWLIVM+KPGGE A KQQMIDCY+QTL
Sbjct: 66  SG-GSYSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTL 125

Query: 137 AKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYG 196
           AKIVGSEEEA+K+IYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE+KDYG
Sbjct: 126 AKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYG 185

Query: 197 AELLVNGEIVQRSPERQRR-VQPQPQRANDRPKYTDRTRYVRRRENM 243
           AEL VNGE+V R PERQRR V+   QR +D+PKY DR R VRRRENM
Sbjct: 186 AELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENM 231

[Close]

BLAST of CsGy3G011840 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 101/238 (42.44%), Postives = 139/238 (58.40%), Query Frame = 0


Query: 12  ASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLR 71
           A +ST     ++L + L  SSST    + P+  +  R ++PL+        S+SR     
Sbjct: 2   ALISTRRTLSTLLNKTL--SSSTSYSSSFPTLSSRSRFAMPLIEKV-----SSSRTSLGP 61

Query: 72  CF-SSRP--GNSSYSPLNSNS-NFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQ 131
           C+ S+RP    S YSPLN  S N++ RPP E   L  GCDYEHWLIVM+    +  T+++
Sbjct: 62  CYISTRPKTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEE 121

Query: 132 MIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSY 191
           MI+ Y++TL  ++G EEEAKK+IY+V    Y GFG  + EE S K++ LPGVL+VLPDSY
Sbjct: 122 MINSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSY 181

Query: 192 VDPEYKDYGAELLVNGEIVQRSPER---QRRVQPQPQRANDRPKYTDRTRYVRRRENM 243
           +D   KDYG +L V G+++ R   R   QR  +P+P           R RY RRRE M
Sbjct: 182 LDVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----------RPRYDRRRETM 219

[Close]

BLAST of CsGy3G011840 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 144.8 bits (364), Expect = 9.0e-35
Identity = 100/238 (42.02%), Postives = 139/238 (58.40%), Query Frame = 0


Query: 12  ASVSTSAARLSILPRRLFSSSSTLTHPTSPSSFTLRRRSLPLLSHAVRSIPSTSRFDSLR 71
           A +ST     ++L + L  SSST    + P+  +  R ++PL+        S+SR     
Sbjct: 2   ALISTRRTLSTLLNKTL--SSSTSYSSSFPTLSSRSRFAMPLIEKV-----SSSRTSLGP 61

Query: 72  CF-SSRP--GNSSYSPLNSNS-NFNERPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQ 131
           C+ S+RP    S YSPLN  S N++ RPP E   L  GCDYEHWLIVM+    +  T+++
Sbjct: 62  CYISTRPKTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEE 121

Query: 132 MIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSY 191
           MI+ Y++TL  ++G +EEAKK+IY+V    Y GFG  + EE S K++ LPGVL+VLPDSY
Sbjct: 122 MINSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSY 181

Query: 192 VDPEYKDYGAELLVNGEIVQRSPER---QRRVQPQPQRANDRPKYTDRTRYVRRRENM 243
           +D   KDYG +L V G+++ R   R   QR  +P+P           R RY RRRE M
Sbjct: 182 LDVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----------RPRYDRRRETM 219

The following BLAST results are available for this feature:

BLAST of CsGy3G011840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22793	1.3e-86	74.31	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9C7Y2	7.8e-84	69.49	Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabido...	[more]
O82169	3.0e-83	69.16	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84JZ6	3.3e-34	42.44	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q38732	2.2e-33	42.41	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]

BLAST of CsGy3G011840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134048.1	6.51e-167	100.00	multiple organellar RNA editing factor 2, chloroplastic [Cucumis sativus] >KGN56...	[more]
XP_008438483.1	2.73e-159	95.47	PREDICTED: multiple organellar RNA editing factor 2, chloroplastic [Cucumis melo...	[more]
XP_022149612.1	1.30e-141	85.54	multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charanti...	[more]
XP_038896418.1	3.28e-140	87.24	multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida]	[more]
XP_022924432.1	2.15e-134	83.06	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbi...	[more]

BLAST of CsGy3G011840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L878	3.15e-167	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134800 PE=4 SV=1	[more]
A0A5D3CZF4	1.32e-159	95.47	Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3AW51	1.32e-159	95.47	multiple organellar RNA editing factor 2, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1D8H1	6.28e-142	85.54	multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charan...	[more]
A0A6J1E8X5	1.04e-134	83.06	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucur...	[more]

BLAST of CsGy3G011840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33430.1	9.1e-88	74.31	differentiation and greening-like 1	[more]
AT1G32580.1	5.5e-85	69.49	plastid developmental protein DAG, putative	[more]
AT2G35240.1	2.1e-84	69.16	plastid developmental protein DAG, putative	[more]
AT3G06790.2	2.4e-35	42.44	plastid developmental protein DAG, putative	[more]
AT3G06790.1	9.0e-35	42.02	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 106..189 e-value: 1.7E-6 score: 30.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..243
None	No IPR available	PANTHER	PTHR31346:SF15	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2 CHLOROPLASTIC	coord: 8..242
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 8..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G011840.2	CsGy3G011840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005739	mitochondrion