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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGAGAACCAAGACTACTGATGGAAATTTAAAGCGAACGGAGCAATCACATGAGAGATTAAGATTGAAAAAATCAAGAATGAATGAAGGTTTAAGATCTCAAGAGATATTTAGAGCTGCTACTAAAAAGCTCTTATCAATCTGGAAGATGAAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGCTCTAAAGCGTTAAGATTAGTGAGGGCTTTTGAAGAGAGATAG mRNA sequence ATGAAGAGAACCAAGACTACTGATGGAAATTTAAAGCGAACGGAGCAATCACATGAGAGATTAAGATTGAAAAAATCAAGAATGAATGAAGCTCTTATCAATCTGGAAGATGAAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGCTCTAAAGCGTTAAGATTAGTGAGGGCTTTTGAAGAGAGATAG Coding sequence (CDS) ATGAAGAGAACCAAGACTACTGATGGAAATTTAAAGCGAACGGAGCAATCACATGAGAGATTAAGATTGAAAAAATCAAGAATGAATGAAGCTCTTATCAATCTGGAAGATGAAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGCTCTAAAGCGTTAAGATTAGTGAGGGCTTTTGAAGAGAGATAG Protein sequence MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGEGEEEEEEEEEEEEEDGSKALRLVRAFEER*
Homology
BLAST of CsGy3G010875 vs. NCBI nr
Match: KAE8650298.1 (hypothetical protein Csa_010093 [Cucumis sativus]) HSP 1 Score: 109 bits (272), Expect = 1.71e-29 Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0
Query: 1 MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGEGEEEEEEEEEEEEEDGSKA 60
MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGE EEEEEEEEEEEEDGSKA
Sbjct: 1 MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGE--EEEEEEEEEEEEDGSKA 60
Query: 61 LRLVRAFEER 70
LRLVRAFEER
Sbjct: 61 LRLVRAFEER 68
BLAST of CsGy3G010875 vs. ExPASy TrEMBL
Match: A0A0A0L7Y0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130870 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.40e-22 Identity = 69/118 (58.47%), Postives = 69/118 (58.47%), Query Frame = 0
Query: 1 MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGEGEEEEEEEEEEEEE----- 60
MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGE EEEEEEEEEEEEE
Sbjct: 1 MKRTKTTDGNLKRTEQSHERLRLKKSRMNEALINLEDEEGEEEEEEEEEEEEEEEEEEEE 60
Query: 61 -------------------------------------------DGSKALRLVRAFEER 70
DGSKALRLVRAFEER
Sbjct: 61 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDGSKALRLVRAFEER 118
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KAE8650298.1 | 1.71e-29 | 97.14 | hypothetical protein Csa_010093 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L7Y0 | 2.40e-22 | 58.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130870 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 11..55 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 35..56 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..34 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..61 |
Relationships
The following mRNA feature(s) are a part of this gene:
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