|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATAGCATAATGGGAGATCCAAATGAAAATCGACAAAACGTGATTCTTATTTTTCTTCATTTGTTTCGTCATCTGCTTGTGAGATTACCGAATCAACATGGTTCTTTCTTCCTCCCTCATTTCTGGAATCAAAGATCGAAACTAAAGCGTGAATCAGTGCAAGATCCAACAGCCAACAGCAAGGAGCGAGAAGAAGAATTTGAAGGGGGAGTGAAGCAACTTTGA mRNA sequence ATGGATAGCATAATGGGAGATCCAAATGAAAATCGACAAAACGTGATTCTTATTTTTCTTCATTTGTTTCGTCATCTGCTTGTGAGATTACCGAATCAACATGGTTCTTTCTTCCTCCCTCATTTCTGGAATCAAAGATCGAAACTAAAGCGTGAATCAGTGCAAGATCCAACAGCCAACAGCAAGGAGCGAGAAGAAGAATTTGAAGGGGGAGTGAAGCAACTTTGA Coding sequence (CDS) ATGGATAGCATAATGGGAGATCCAAATGAAAATCGACAAAACGTGATTCTTATTTTTCTTCATTTGTTTCGTCATCTGCTTGTGAGATTACCGAATCAACATGGTTCTTTCTTCCTCCCTCATTTCTGGAATCAAAGATCGAAACTAAAGCGTGAATCAGTGCAAGATCCAACAGCCAACAGCAAGGAGCGAGAAGAAGAATTTGAAGGGGGAGTGAAGCAACTTTGA Protein sequence MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTANSKEREEEFEGGVKQL*
Homology
BLAST of CsGy3G010537 vs. NCBI nr
Match: KGN56694.1 (hypothetical protein Csa_010969 [Cucumis sativus]) HSP 1 Score: 157 bits (398), Expect = 1.51e-48 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60
MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN
Sbjct: 1 MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60
Query: 61 SKEREEEFEGGVKQL 75
SKEREEEFEGGVKQL
Sbjct: 61 SKEREEEFEGGVKQL 75
BLAST of CsGy3G010537 vs. ExPASy TrEMBL
Match: A0A0A0L6N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129510 PE=4 SV=1) HSP 1 Score: 157 bits (398), Expect = 7.31e-49 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60
MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN
Sbjct: 1 MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60
Query: 61 SKEREEEFEGGVKQL 75
SKEREEEFEGGVKQL
Sbjct: 61 SKEREEEFEGGVKQL 75
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN56694.1 | 1.51e-48 | 100.00 | hypothetical protein Csa_010969 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L6N2 | 7.31e-49 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129510 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 49..75 |
Relationships
The following mRNA feature(s) are a part of this gene:
|
