CsGy3G009040 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G009040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	LIM domain-containing protein PLIM2b-like
Location	Gy14Chr3: 7365683 .. 7368156 (+)
RNA-Seq Expression	CsGy3G009040
Synteny	CsGy3G009040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACGCTGTCTTCCATTCCAACGAACACAACGGCGAACCACTCAGATAATGGAAGGCAAATGGCTTTCATCTCTCTCTCTCTCTCTCCACCCTCCATTTTTGTTCTCACAAAAAGCTCGACGAGTTCCTTTGAAATGGTCAACCAATCCCCCCCCCCTTATTTTCCTCTGAAACAACCCATCTTCTCCGAAATTGGAGCAGATCCATCTTCTGGTTCACAGTTCTGAAATCCAACATTTCCTGATGTATAAATTTGCTTTTGTAGTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTGTTTATTAACTGATAGACGAGGCTTCGGACGGCTTGGGGTTTCAATTGCCCTGTTTTTCTTCGTTTCTGGGGGTGGTTTCTTTCTTTGCTCTTACTTTTTTTTGCTCTTTCTCCAAGTTCTTGCATCTCGGATCAAGAATTCTTGTAAAAGAGTAAATTCTTCATAATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGGTTAGAAGTGTTCAATCTCTTTTAATTTATTTCAATTTGAAATCCAATTACTTGAATTTGGCGGATTTTATCCCAATTGTTTGTTTATGGCAGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTTTTTGTTTCTTCCTTTTTACTTTTCCTTATTTTCTGACATTCTCTCCTTTCCATGGTTTTGTATGACAACAGCTAAATCTTCTGATAAGCCAAATGATCTGGTATGATCTCACTCTTTTCACTTTTCTTAGGCTAGGTCGGCTTCATTGTGACTAGCAATTTTATGTTGGATGTATCTGCAAAAGCTTGGTTGTTAATGTTAGGCCGATGCAAATTTCCGAATTCATATCTAAAGGTTATTAGGATAAAGTCAAATTTTGGATGCTTCATCCAATAATTTCTCCCCCAATTCATGGTTTTGAATATACTATTCCTAATATTTTTATAGAAACAATCTGGCCTGGGAATTCTTGCACCTTTATGATAGTGGTTTTGTTCCTTATTTTAAAGCTTGCTCTTGAGTCCAATGGGGTTATAATATGTCATGAGAATAGGAAGGGTTTAAAGTTCCTATGATGTCATTTTATCCTCATTTCATATTTGGTAGTTTATGTCTTAGGGTTCATGAATCAAATTTAACTTTAGGAATTTCAACATTGTGCTCTCCATGCAAATGCTGTAATTTTTGCATATTATTACAATTTTCATAACTTTTGATAGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTATGTAGTTCTTCACCCCCTCCCCCTGCCTCCTATTTTGTATAATACATTTTTACAGTATTGTTAGTCTTTAAAATGTGAAAGAAACATTATTCTGCAGGGTTTTCTTTATTTGTTTGGAATGACTTTTTAAGTATTTATAAAAGTGTTTCTAAGTGGAAAAAAAAATGTTTTCAACATTTTAAATGATGAGGAGAATTGTAAGATATTTAGTTCTTAATTTCGATATTAATATTAGCTGATTTTAGGGTTGTGATAGAGAATGCTCCCTCATTTCTAAGGGATGGATTATTTTTCATGTTTGGCCATAGATTTGGCCTAATACTTAAATCTGCTACATCAAAATGTCATTTCAAATAGCTGATATATGGTTAGGAGAATTGAAACTGTATTATTTTTGTTTTTGGGAATAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAAAATACCTTCTCTGCTCTACCAGCATTTGAGAATTCTTCTTCGCTTTATTCAACTTATAAAGAAAACAAAAATTATTCTGTTTCAAAAGAGAACCCATTTGTTTTTGTTCACATATTCACATTGGTTTGTTGTACTTGAAGACTCAAATTATGTGAGCTAGATAAACAGACCTTTCAAAGAATTGCACCATAGTTCTGTGTTGAATGAGAAGCTGGAATAAAAAGCAGATTTGGTGCAATTCCATATGGTCACCAAATATATTTTAGAAAAATATGATTTGATTGCATG

mRNA sequence

GAAACGCTGTCTTCCATTCCAACGAACACAACGGCGAACCACTCAGATAATGGAAGGCAAATGGCTTTCATCTCTCTCTCTCTCTCTCCACCCTCCATTTTTGTTCTCACAAAAAGCTCGACGAGTTCCTTTGAAATGGTCAACCAATCCCCCCCCCCTTATTTTCCTCTGAAACAACCCATCTTCTCCGAAATTGGAGCAGATCCATCTTCTGGTTCACAGTTCTGAAATCCAACATTTCCTGATGTATAAATTTGCTTTTGTAGTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTGTTTATTAACTGATAGACGAGGCTTCGGACGGCTTGGGGTTTCAATTGCCCTGTTTTTCTTCGTTTCTGGGGGTGGTTTCTTTCTTTGCTCTTACTTTTTTTTGCTCTTTCTCCAAGTTCTTGCATCTCGGATCAAGAATTCTTGTAAAAGAGTAAATTCTTCATAATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTTTTTGTTTCTTCCTTTTTACTTTTCCTTATTTTCTGACATTCTCTCCTTTCCATGGTTTTGTATGACAACAGCTAAATCTTCTGATAAGCCAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAAAATACCTTCTCTGCTCTACCAGCATTTGAGAATTCTTCTTCGCTTTATTCAACTTATAAAGAAAACAAAAATTATTCTGTTTCAAAAGAGAACCCATTTGTTTTTGTTCACATATTCACATTGGTTTGTTGTACTTGAAGACTCAAATTATGTGAGCTAGATAAACAGACCTTTCAAAGAATTGCACCATAGTTCTGTGTTGAATGAGAAGCTGGAATAAAAAGCAGATTTGGTGCAATTCCATATGGTCACCAAATATATTTTAGAAAAATATGATTTGATTGCATG

Coding sequence (CDS)

ATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTTTTTGTTTCTTCCTTTTTACTTTTCCTTATTTTCTGACATTCTCTCCTTTCCATGGTTTTGTATGACAACAGCTAAATCTTCTGATAAGCCAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS*

Homology

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BLAST of CsGy3G009040 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.2e-78
Identity = 143/237 (60.34%), Postives = 168/237 (70.89%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL+TLEG PYHK+CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTRT 121
           FEQLFKESGNFSKNFQ                              TA  ++K ND T+ 
Sbjct: 63  FEQLFKESGNFSKNFQ------------------------------TAGKTEKSNDATKA 122

Query: 122 PSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGV 181
           P++LSS FSGTQDKC+ C KTVYPLEK+++EGE YHK CFRCAH GC LTH SYAALDGV
Sbjct: 123 PNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGV 182

Query: 182 LYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHT---DEDAEPSPRSGEQAVEQ 236
           LYCK HF+QLF+ KGNYNHVL+AAAN + +T   D T   +++A P+      A  +
Sbjct: 183 LYCKVHFSQLFLEKGNYNHVLQAAANHRRSTAEEDKTEPKEDEANPTEEETSDAAAE 209

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BLAST of CsGy3G009040 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-77
Identity = 142/233 (60.94%), Postives = 165/233 (70.82%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+L++EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ   T                               +KP +LTR
Sbjct: 61  HFEQLFKESGNFSKNFQPGKT-------------------------------EKP-ELTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSK+SS+F GTQDKC+ C KTVYPLEK+ +EGEC+HK CFRCAHGGC LTH SYA+LD 
Sbjct: 121 TPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDS 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKT----TTPPADHTDEDAEPSPRSG 230
           VLYC+HHF QLFM KGNY HVL+AA +++T    T PP    D   E    +G
Sbjct: 181 VLYCRHHFNQLFMEKGNYAHVLQAANHRRTASGNTLPPEPTEDVAVEAKEENG 201

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BLAST of CsGy3G009040 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.0e-77
Identity = 146/238 (61.34%), Postives = 170/238 (71.43%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLLTLEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPND-LT 120
           HFEQLFKESGN+SKNFQ+  T                               +KPND LT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKT-------------------------------EKPNDHLT 120

Query: 121 RTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALD 180
           RTPSKLSS FSGTQDKC+ C KTVYPLEKV++EGE YHK CFRC H GC LTH SYA+L+
Sbjct: 121 RTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLN 180

Query: 181 GVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT------TPPA-DHTDEDAEPSPRSGE 231
           GVLYCK HF QLF+ KG+YNHV +AAAN + +      +PP+ DH  +D    P + E
Sbjct: 181 GVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of CsGy3G009040 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67
Identity = 130/231 (56.28%), Postives = 150/231 (64.94%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT DKC ACDKTV+ +DLLT +G PYHK CFKCSHCKG LSM SYS MDGVLYCKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKE+G+FSK F                                 +S+DK  +L R
Sbjct: 61  HFEQLFKETGSFSKKFAPG-----------------------------CRSTDK--ELAR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
            PSK+ S FSGTQDKC+ C KTVYPLEK++LEGE YHK CF+C+HGGC LT  SYAAL+G
Sbjct: 121 APSKICSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVL----------EAAANKKTTTPPADHTDED 222
           VLYCK HF QLFM KG+YNH+           E    ++   PP D   ED
Sbjct: 181 VLYCKIHFGQLFMEKGSYNHMKKKSESQEVLPEVVPEEQPAPPPPDENRED 200

[Close]

BLAST of CsGy3G009040 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67
Identity = 118/212 (55.66%), Postives = 154/212 (72.64%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LL+ +G  YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPN-DLT 120
           HFEQLFKESG+FSKNFQS +                               +DKP  +L 
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL----------------------------TDKPTPELN 120

Query: 121 RTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALD 180
           RTPS+L+ MFSGTQDKC+ CTKTVYP+EKV++E +CYHK CF+C+HGGC ++  +YAAL+
Sbjct: 121 RTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALE 180

Query: 181 GVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 212
           G+LYCKHHFAQLF  KG+YNH++++A+ K+ T
Sbjct: 181 GILYCKHHFAQLFKEKGSYNHLIKSASIKRAT 184

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BLAST of CsGy3G009040 vs. NCBI nr
Match: XP_004133874.1 (LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical protein Csa_011551 [Cucumis sativus])

HSP 1 Score: 415 bits (1066), Expect = 1.11e-145
Identity = 204/236 (86.44%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               KSSDKPNDLTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KSSDKPNDLTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG
Sbjct: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 402 bits (1034), Expect = 8.39e-141
Identity = 197/236 (83.47%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               K S++ NDLTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KPSERQNDLTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMF GTQDKCSVCTKTVYPLEKV+LEGECYHKKCFRCAHGGCHLTHCSYAALDG
Sbjct: 121 TPSKLSSMFCGTQDKCSVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. NCBI nr
Match: KAA0048980.1 (LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa] >TYK17584.1 LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa])

HSP 1 Score: 400 bits (1027), Expect = 1.13e-139
Identity = 200/236 (84.75%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQSSSTT L    P         +S  +FC+T             
Sbjct: 61  HFEQLFKESGNFSKNFQSSSTTIL----P---------ISPIFFCLT------------- 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
            PSKLSSMF GTQDKCSVCTKTVYPLEKV+LEGECYHKKCFRCAHGGCHLTHCSYAALDG
Sbjct: 121 -PSKLSSMFCGTQDKCSVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

[Close]

BLAST of CsGy3G009040 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 382 bits (981), Expect = 1.04e-132
Identity = 186/236 (78.81%), Postives = 198/236 (83.90%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQS+                              K S+K ++LTR
Sbjct: 61  HFEQLFKESGNFSKNFQST------------------------------KPSEKQSELTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMFSGTQDKC+VCTKTVYPLEKV+LEGECYHK CFRCAHGGCHLTHCSYAALDG
Sbjct: 121 TPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPA+H +EDA+P P+S E AVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHGEEDADPQPQSEEHAVEQS 206

[Close]

BLAST of CsGy3G009040 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 380 bits (976), Expect = 5.80e-132
Identity = 185/236 (78.39%), Postives = 197/236 (83.47%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               K S+K ++LTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KPSEKQSELTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMFSGTQDKC+VCTKTVYPLEKV+LEGECYHK CFRCAHGGCHLTHCSYAALDG
Sbjct: 121 TPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPA+H +EDA+P P+S E AVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHGEEDADPQPQSEEHAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 5.38e-146
Identity = 204/236 (86.44%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               KSSDKPNDLTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KSSDKPNDLTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG
Sbjct: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 4.06e-141
Identity = 197/236 (83.47%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               K S++ NDLTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KPSERQNDLTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMF GTQDKCSVCTKTVYPLEKV+LEGECYHKKCFRCAHGGCHLTHCSYAALDG
Sbjct: 121 TPSKLSSMFCGTQDKCSVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. ExPASy TrEMBL
Match: A0A5D3D2N0 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004540 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 5.47e-140
Identity = 200/236 (84.75%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQSSSTT L    P         +S  +FC+T             
Sbjct: 61  HFEQLFKESGNFSKNFQSSSTTIL----P---------ISPIFFCLT------------- 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
            PSKLSSMF GTQDKCSVCTKTVYPLEKV+LEGECYHKKCFRCAHGGCHLTHCSYAALDG
Sbjct: 121 -PSKLSSMFCGTQDKCSVCTKTVYPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

[Close]

BLAST of CsGy3G009040 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 367 bits (942), Expect = 4.25e-127
Identity = 181/236 (76.69%), Postives = 193/236 (81.78%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               K S+K ++LTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KPSEKQSELTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLS+MFSGTQDKCSVCTKTVYPLEKV+LEGECYHK CFRCAHGGCHLTH SYAALDG
Sbjct: 121 TPSKLSTMFSGTQDKCSVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHF+QLFMVKGNYNHVLEAAANKK TTPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 VLYCKHHFSQLFMVKGNYNHVLEAAANKKNTTPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 8.58e-127
Identity = 181/236 (76.69%), Postives = 192/236 (81.36%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ+                               K S+K ++LTR
Sbjct: 61  HFEQLFKESGNFSKNFQT-------------------------------KPSEKQSELTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSKLSSMFSGTQDKCSVCTKTVYPLEKV+LEGECYHK CFRCAHGGCHLTH SYAALDG
Sbjct: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDG 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 236
           VLYCKHHF+QLFMVKGNYNHVLEAAANKK  TPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 VLYCKHHFSQLFMVKGNYNHVLEAAANKKNATPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of CsGy3G009040 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 292.0 bits (746), Expect = 4.4e-79
Identity = 143/237 (60.34%), Postives = 168/237 (70.89%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL+TLEG PYHK+CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTRT 121
           FEQLFKESGNFSKNFQ                              TA  ++K ND T+ 
Sbjct: 63  FEQLFKESGNFSKNFQ------------------------------TAGKTEKSNDATKA 122

Query: 122 PSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGV 181
           P++LSS FSGTQDKC+ C KTVYPLEK+++EGE YHK CFRCAH GC LTH SYAALDGV
Sbjct: 123 PNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGV 182

Query: 182 LYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHT---DEDAEPSPRSGEQAVEQ 236
           LYCK HF+QLF+ KGNYNHVL+AAAN + +T   D T   +++A P+      A  +
Sbjct: 183 LYCKVHFSQLFLEKGNYNHVLQAAANHRRSTAEEDKTEPKEDEANPTEEETSDAAAE 209

[Close]

BLAST of CsGy3G009040 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 291.2 bits (744), Expect = 7.5e-79
Identity = 142/233 (60.94%), Postives = 165/233 (70.82%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+L++EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPNDLTR 120
           HFEQLFKESGNFSKNFQ   T                               +KP +LTR
Sbjct: 61  HFEQLFKESGNFSKNFQPGKT-------------------------------EKP-ELTR 120

Query: 121 TPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDG 180
           TPSK+SS+F GTQDKC+ C KTVYPLEK+ +EGEC+HK CFRCAHGGC LTH SYA+LD 
Sbjct: 121 TPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDS 180

Query: 181 VLYCKHHFAQLFMVKGNYNHVLEAAANKKT----TTPPADHTDEDAEPSPRSG 230
           VLYC+HHF QLFM KGNY HVL+AA +++T    T PP    D   E    +G
Sbjct: 181 VLYCRHHFNQLFMEKGNYAHVLQAANHRRTASGNTLPPEPTEDVAVEAKEENG 201

[Close]

BLAST of CsGy3G009040 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-78
Identity = 146/238 (61.34%), Postives = 170/238 (71.43%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLLTLEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPND-LT 120
           HFEQLFKESGN+SKNFQ+  T                               +KPND LT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKT-------------------------------EKPNDHLT 120

Query: 121 RTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALD 180
           RTPSKLSS FSGTQDKC+ C KTVYPLEKV++EGE YHK CFRC H GC LTH SYA+L+
Sbjct: 121 RTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLN 180

Query: 181 GVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT------TPPA-DHTDEDAEPSPRSGE 231
           GVLYCK HF QLF+ KG+YNHV +AAAN + +      +PP+ DH  +D    P + E
Sbjct: 181 GVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of CsGy3G009040 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 118/212 (55.66%), Postives = 154/212 (72.64%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LL+ +G  YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPN-DLT 120
           HFEQLFKESG+FSKNFQS +                               +DKP  +L 
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL----------------------------TDKPTPELN 120

Query: 121 RTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALD 180
           RTPS+L+ MFSGTQDKC+ CTKTVYP+EKV++E +CYHK CF+C+HGGC ++  +YAAL+
Sbjct: 121 RTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALE 180

Query: 181 GVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 212
           G+LYCKHHFAQLF  KG+YNH++++A+ K+ T
Sbjct: 181 GILYCKHHFAQLFKEKGSYNHLIKSASIKRAT 184

[Close]

BLAST of CsGy3G009040 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 253.4 bits (646), Expect = 1.7e-67
Identity = 117/211 (55.45%), Postives = 155/211 (73.46%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KCKAC+KTVY V+LL+ +G  YHK+CFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSSSTTFLFLFLPFYFSLFSDILSFPWFCMTTAKSSDKPN-DLT 120
           HFEQLFKESG+F+KNFQS                              AKS+DK   +LT
Sbjct: 61  HFEQLFKESGSFNKNFQS-----------------------------PAKSADKSTPELT 120

Query: 121 RTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALD 180
           RTPS+++  FSGTQ+KC+ C+KTVYP+EKV++E + YHK CF+C+HGGC ++  +YAAL+
Sbjct: 121 RTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALE 180

Query: 181 GVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 211
           G+LYCKHHFAQLF  KG+YNH++++A+ K++
Sbjct: 181 GILYCKHHFAQLFKEKGSYNHLIKSASIKRS 182

The following BLAST results are available for this feature:

BLAST of CsGy3G009040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500W4	6.2e-78	60.34	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q1ECF5	1.1e-77	60.94	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	4.0e-77	61.34	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	2.2e-67	56.28	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
O04193	2.2e-67	55.66	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]

BLAST of CsGy3G009040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133874.1	1.11e-145	86.44	LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical ...	[more]
XP_008438068.1	8.39e-141	83.47	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]
KAA0048980.1	1.13e-139	84.75	LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa] >TYK17584.1...	[more]
XP_038891725.1	1.04e-132	78.81	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
XP_038891791.1	5.80e-132	78.39	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]

BLAST of CsGy3G009040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A8	5.38e-146	86.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
A0A1S3AVG8	4.06e-141	83.47	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
A0A5D3D2N0	5.47e-140	84.75	LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1IW81	4.25e-127	76.69	LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9W7	8.58e-127	76.69	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CsGy3G009040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61230.1	4.4e-79	60.34	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	7.5e-79	60.94	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	2.9e-78	61.34	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	1.6e-68	55.66	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.7e-67	55.45	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 135..187 e-value: 1.9E-10 score: 50.7 coord: 9..61 e-value: 1.7E-12 score: 57.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 1.2E-12 score: 47.9 coord: 136..191 e-value: 1.8E-8 score: 34.5
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4839
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 134..194 score: 11.9098
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 130..200 e-value: 9.2E-17 score: 63.0 coord: 6..74 e-value: 9.9E-19 score: 69.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..227
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..227
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..227
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 128..161
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 162..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G009040.2	CsGy3G009040.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding