CsGy3G008540 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G008540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Reticulon-like protein
Location	Gy14Chr3: 7053621 .. 7055531 (-)
RNA-Seq Expression	CsGy3G008540
Synteny	CsGy3G008540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGACCACGCTGAAACCGCCGAACCGAAATCGGAGTCATTGATCGACAAGATAGTTGAGAAGATTCACGATCACGATTCATCTTCATCGTCTGGATCAGACGCCGAAACTGAGGGATCGGCTTCTTCTTCCACTTTGAAGGAGAAGGTCTTCCGGATTTTTGGAAGGGAAAGGCCAGTTCATCACGTCCTTGGTGGTGGCAAACGTACTCAATCTTAACTCTCTGATACAAGTTCTTGAGAATTGTTTTGTTTTGCTTTTCTTCTTTTTGAATTTGTCTTTCTATATTACTGTTCTGTGTTGCTATACTGCTTCTATGGCTTCAGTTGGAGCTCGATGGTTATTGATGCTTATTAGGCGTTTTTGTGCTCTTTAGTTATTGTTTTAGCTTGCTTCGTTATTCTTTGCTTGGATGTAGAATATATAGATCTGGTGGTTTTATCTTACTCTGGAAACGTTGATTGTTCGGATCGACCGTACGACGTACTTGAGCGATTCATAAGCTTTCTGCACAGAGTGTTTATTATAAATTTTCTTTTCCTGAGCTTGCTATATTGGTACATCTGTTCGGGTTTTGATGTTTATAATTTATGTTCCCTACGTCGCTTGTTTTTTTTATTGCATGTTTGAATTCCTTCTGAGGATGATCGGTGTCTTTCTTATGGGTTAAATTGTAAGTCTAGTCGGTTGTGTCTGTTTGTTTTTTAAACTTTCATAGTACAAAATTAGCCCCTCAATAAATTAAACGCAAAGTTTGGAGTTACTGTGAACATAAAATTCAAACATAGATCAATTAATGAATTTGTAGCAACTTATTAGACGCAAAACTGGAAGTTCAAAGTTGAGAGTAATAAAAATTGAAAGGCCTACCTAAGATTTTTCCGAAATTAAATTCCACTAAGTTCAAACTCTAAACTTAGTATAACCTTAAAAAAAATTAGAGTCTGGTGATGTTGACCGTTTCTTAAAATTCAAAAATATGCAGCTGCCGATTTATTCTTGTGGAGGAATAAGAAGATCTCAGCCGGTGTTCTTAGTGGAGCCACTCTCATCTGGGTTTTCTTTGAATTGCTTGAGTGCCATCTGCTTACGTTTATTTCCCGCTCTCTGATTCTTGCTCTTGGGCTCTTGTTCCTTTGGTCCAATGCCCACACATTTATTTACAAGTGAGTAACTGGATATGAATTTCATTTCATCAATAATTAAGTTTCTGACATCTTCAAACCATTCTCTTCTTCCCACCGTTTAACAATTGTATTTACAGGAGCCCACCTCGAATCCCTGTTGTTCAACTCCCTGCGGATCCCTTCCTGGAGTTTGCTTCAGCTTTGAGAGCGGAAATTAATTGTGGTTTTGCACTATTGCGGGACATTGCGACTGGAAGAGATTTGAAGAAATTCCTCACTGTACGTATAGTTTTATCATTATACTTTCATGTCATCTTATTTCGTATTTACTTTGTTGGGTTGGGTTGGGTTTATCTTAATAGGCCCTTTTTAGTCTTGGACATCATTAATGTTAGAATAATTGAGATTCTTCTAAAATTATAGAAATATCATTCCTCTGTCTCCAGGCCATTGCTGCTTTGTGGGTTCTGTCAATTGTGGGAAGCTGGTGCAATTTCTTAACGTTGTTCTACATAAGTAACGACAACTTAATCTCTTTCTCCACATTTATATCTTTATTTATTTTGTTTTGACAATTGAATCTGACATTTGACAACATATTTTGAAAATCACAGACTTCGTTTTGTTGTACACGGTCCCAGTCGTGTATGAGAAATATGAAGATAAGATCGACCCGTTAGCGGAAAAAGCAGTAATTGAGTTCAAAAAGCACTACGCTGTGTTTGAAGAGAAGGTCTTGAGCAAAATTCCAAAAGGCCCATTGAAAGGCAAGAAGGCTTAA

mRNA sequence

ATGTCGGACCACGCTGAAACCGCCGAACCGAAATCGGAGTCATTGATCGACAAGATAGTTGAGAAGATTCACGATCACGATTCATCTTCATCGTCTGGATCAGACGCCGAAACTGAGGGATCGGCTTCTTCTTCCACTTTGAAGGAGAAGGTCTTCCGGATTTTTGGAAGGGAAAGGCCAGTTCATCACGTCCTTGGTGGTGGCAAACCTGCCGATTTATTCTTGTGGAGGAATAAGAAGATCTCAGCCGGTGTTCTTAGTGGAGCCACTCTCATCTGGGTTTTCTTTGAATTGCTTGAGTGCCATCTGCTTACGTTTATTTCCCGCTCTCTGATTCTTGCTCTTGGGCTCTTGTTCCTTTGGTCCAATGCCCACACATTTATTTACAAGAGCCCACCTCGAATCCCTGTTGTTCAACTCCCTGCGGATCCCTTCCTGGAGTTTGCTTCAGCTTTGAGAGCGGAAATTAATTGTGGTTTTGCACTATTGCGGGACATTGCGACTGGAAGAGATTTGAAGAAATTCCTCACTGCCATTGCTGCTTTGTGGGTTCTGTCAATTGTGGGAAGCTGGTGCAATTTCTTAACGTTGTTCTACATAAACTTCGTTTTGTTGTACACGGTCCCAGTCGTGTATGAGAAATATGAAGATAAGATCGACCCGTTAGCGGAAAAAGCAGTAATTGAGTTCAAAAAGCACTACGCTGTGTTTGAAGAGAAGGTCTTGAGCAAAATTCCAAAAGGCCCATTGAAAGGCAAGAAGGCTTAA

Coding sequence (CDS)

ATGTCGGACCACGCTGAAACCGCCGAACCGAAATCGGAGTCATTGATCGACAAGATAGTTGAGAAGATTCACGATCACGATTCATCTTCATCGTCTGGATCAGACGCCGAAACTGAGGGATCGGCTTCTTCTTCCACTTTGAAGGAGAAGGTCTTCCGGATTTTTGGAAGGGAAAGGCCAGTTCATCACGTCCTTGGTGGTGGCAAACCTGCCGATTTATTCTTGTGGAGGAATAAGAAGATCTCAGCCGGTGTTCTTAGTGGAGCCACTCTCATCTGGGTTTTCTTTGAATTGCTTGAGTGCCATCTGCTTACGTTTATTTCCCGCTCTCTGATTCTTGCTCTTGGGCTCTTGTTCCTTTGGTCCAATGCCCACACATTTATTTACAAGAGCCCACCTCGAATCCCTGTTGTTCAACTCCCTGCGGATCCCTTCCTGGAGTTTGCTTCAGCTTTGAGAGCGGAAATTAATTGTGGTTTTGCACTATTGCGGGACATTGCGACTGGAAGAGATTTGAAGAAATTCCTCACTGCCATTGCTGCTTTGTGGGTTCTGTCAATTGTGGGAAGCTGGTGCAATTTCTTAACGTTGTTCTACATAAACTTCGTTTTGTTGTACACGGTCCCAGTCGTGTATGAGAAATATGAAGATAAGATCGACCCGTTAGCGGAAAAAGCAGTAATTGAGTTCAAAAAGCACTACGCTGTGTTTGAAGAGAAGGTCTTGAGCAAAATTCCAAAAGGCCCATTGAAAGGCAAGAAGGCTTAA

Protein sequence

MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERPVHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVLSKIPKGPLKGKKA*

Homology

[Close]

BLAST of CsGy3G008540 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-81
Identity = 162/250 (64.80%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 13  ESLIDKIVEKIH--DHDSSSSSGSDAETE------GSASSSTLKEKVFRIFGRERPVHHV 72
           ESL+DKI EKIH     SSSSS SD E E       S+ SS++K KV+R+FGRE+PVH V
Sbjct: 24  ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83

Query: 73  LGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNA 132
           LGGGKPAD+F+W+NKK+S GVL GAT  WV FEL+E HLLT +   +I+ L +LFLWSNA
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 133 HTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWV 192
             FI KSPP+IP V +P +P L+ AS LR EIN GF+ LR+IA+GRDLKKFL AIA LWV
Sbjct: 144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203

Query: 193 LSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVLSK 252
           LSI+G   NFLTL YI  VLL+TVP+ Y+KYEDK+DPL EKA+IE KK YAV +EKVLSK
Sbjct: 204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263

Query: 253 IPKGPLKGKK 255
           IP GPLK KK
Sbjct: 264 IPLGPLKNKK 273

[Close]

BLAST of CsGy3G008540 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.6e-79
Identity = 154/246 (62.60%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 13  ESLIDKIVEKIHDH-DSSSSSGSDAETEGSASSS---TLKEKVFRIFGRERPVHHVLGGG 72
           ESL++K+ EKIH   DSSSSS SD E E  +SSS   +LK KV+R+FGRERPVH VLGGG
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 73  KPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNAHTFI 132
           KPAD+F+W++KK+S GV  GAT+ WV FEL+E HLLT +   +I+AL +LFLWSNA  FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 133 YKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWVLSIV 192
           +KSPP+IP V +P +P L+ AS LR EIN G + LR+IA+GRD+KKFL+AIA LWVLSI+
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203

Query: 193 GSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVLSKIPKG 252
           G   +FLTL YI  VLL+TVP+ Y+KYEDK+D   EKA+ E KK YAV + KV SKIP+G
Sbjct: 204 GGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRG 263

Query: 253 PLKGKK 255
           PLK KK
Sbjct: 264 PLKDKK 269

[Close]

BLAST of CsGy3G008540 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.1e-79
Identity = 152/253 (60.08%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           M++  E + P  ESL++KI EKIH HDSSSS  S++E E   S S +K K++R+FGRE+P
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSS--SESEYEKPDSPSAVKAKIYRMFGREKP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VH VLGGGKPAD+FLWR+KK+S  VL  AT IWV FEL+E HLL+ +    ILALG LFL
Sbjct: 61  VHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHT I K+ P+IP + +P + FL  AS+LR E+N  F +LR IA GRDLKKFL  + 
Sbjct: 121 WSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
            LW++S+VG+W NFLTL YI FV+L+TVP++YEK+EDK+DPLAEKA+ E +K Y VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 240

Query: 241 VLSKIPKGPLKGK 254
           VLSKIP   LK K
Sbjct: 241 VLSKIPIASLKAK 251

[Close]

BLAST of CsGy3G008540 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.7e-78
Identity = 149/253 (58.89%), Postives = 189/253 (74.70%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           M++  E +  K ESL++KI +KIHDHDSSSS  SD+E E   S S LK K++R+FGRE+P
Sbjct: 1   MAEELEKSMHKEESLMEKIADKIHDHDSSSS--SDSEHEKPESPSALKAKIYRLFGREKP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VH VLGGG PAD+FLWR+KK+SA VL  AT IWV FEL+E H L+ +   LI AL  LFL
Sbjct: 61  VHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
            SNAH F+ K+PP+IP + +  + FL   SALR E+N  F +LR IA GRDLKKFL  + 
Sbjct: 121 LSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVF 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
            LW++S+VG+W NFLTL YI FV+L+TVP++YEK+EDK+DP+AEK + E KKHY VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEK 240

Query: 241 VLSKIPKGPLKGK 254
           VLSK+P   LK K
Sbjct: 241 VLSKLPVASLKAK 251

[Close]

BLAST of CsGy3G008540 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.7e-77
Identity = 154/248 (62.10%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 13  ESLIDKIVEKIHDH-DSSSSSGSDAETEG-SASSSTLKEKVFRIFGRERPVHHVLGGGKP 72
           ES+++KIVEKIH H DSSS S SD + +  S+SSS+ K K++R+FGRE+PVH VLGGGKP
Sbjct: 9   ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68

Query: 73  ADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNAHTFIYK 132
           AD+FLWRNKK+S GVL   T  WV FEL E HLL F+    I AL  LFLWSNA TFI+K
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128

Query: 133 SPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWVLSIVGS 192
           S P IP V +P DP L+  S LR EIN G  LLR+IA+G+D+KKF+  IA LWVLSI+GS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188

Query: 193 WCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVL----SKIP 252
             NFLTLFY   VLL+T+PV+YEKYEDK+D   EKA+ E KK YAV +EKVL    SKIP
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIP 248

Query: 253 KGPLKGKK 255
           +G L  KK
Sbjct: 249 RGALNKKK 256

[Close]

BLAST of CsGy3G008540 vs. NCBI nr
Match: XP_004133840.1 (reticulon-like protein B1 [Cucumis sativus] >KGN56474.1 hypothetical protein Csa_011645 [Cucumis sativus])

HSP 1 Score: 497 bits (1280), Expect = 3.50e-177
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. NCBI nr
Match: KAA0048936.1 (reticulon-like protein B5 [Cucumis melo var. makuwa])

HSP 1 Score: 487 bits (1254), Expect = 3.22e-173
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAE  EPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPF+E AS LRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFMELASTLRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. NCBI nr
Match: XP_008437980.1 (PREDICTED: reticulon-like protein B5 [Cucumis melo] >TYK17632.1 reticulon-like protein B5 [Cucumis melo var. makuwa])

HSP 1 Score: 485 bits (1249), Expect = 1.86e-172
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAE  EPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPF+EFAS LRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFMEFASTLRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKAVIEFKK YAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKLYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. NCBI nr
Match: XP_022924602.1 (reticulon-like protein B5 [Cucurbita moschata])

HSP 1 Score: 477 bits (1227), Expect = 4.20e-169
Identity = 241/255 (94.51%), Postives = 250/255 (98.04%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDH+E AEPKSESLIDKIVEKIHDHDSSSSSGSD+ETEGSASSS+LKEKVFR+FGRERP
Sbjct: 1   MSDHSENAEPKSESLIDKIVEKIHDHDSSSSSGSDSETEGSASSSSLKEKVFRLFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHV GGGKPADLFLWRNKKISAGVLSGAT+IWVFFELLECHLLTF+SRSLILALGLLFL
Sbjct: 61  VHHVFGGGKPADLFLWRNKKISAGVLSGATVIWVFFELLECHLLTFVSRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKS PRIPVVQLPADPFLEFAS LRAEINCG ALLRDIATGRDLKKF+TAIA
Sbjct: 121 WSNAHTFIYKSAPRIPVVQLPADPFLEFASTLRAEINCGIALLRDIATGRDLKKFITAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKA+IEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. NCBI nr
Match: XP_023528640.1 (reticulon-like protein B5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476 bits (1224), Expect = 1.20e-168
Identity = 240/255 (94.12%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDH+E AEPKSESLIDKIVEKIHDHDSSSSSGSD+ETEGSASSS+LKEKVFR+FGRERP
Sbjct: 1   MSDHSENAEPKSESLIDKIVEKIHDHDSSSSSGSDSETEGSASSSSLKEKVFRLFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHV GGGKPADLFLWRNKKISAGVLSGAT+IWVFFELLECHLLTF+SRSLILALGLLFL
Sbjct: 61  VHHVFGGGKPADLFLWRNKKISAGVLSGATIIWVFFELLECHLLTFVSRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKS PRIPVVQLPADPFLEFAS LRAEINCG ALLRDIATGRDLKKF+TAIA
Sbjct: 121 WSNAHTFIYKSAPRIPVVQLPADPFLEFASTLRAEINCGIALLRDIATGRDLKKFITAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKA+IEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGP KGKKA
Sbjct: 241 VLSKIPKGPFKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. ExPASy TrEMBL
Match: A0A0A0L627 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G121020 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 1.69e-177
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. ExPASy TrEMBL
Match: A0A5A7U3V2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001560 PE=4 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 1.56e-173
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAE  EPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPF+E AS LRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFMELASTLRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. ExPASy TrEMBL
Match: A0A5D3D1C2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005030 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 9.01e-173
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAE  EPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPF+EFAS LRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFMEFASTLRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKAVIEFKK YAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKLYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. ExPASy TrEMBL
Match: A0A1S3AVW2 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103483236 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 9.01e-173
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDHAE  EPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKSPPRIPVVQLPADPF+EFAS LRAEINCGFALLRDIATGRDLKKFLTAIA
Sbjct: 121 WSNAHTFIYKSPPRIPVVQLPADPFMEFASTLRAEINCGFALLRDIATGRDLKKFLTAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKAVIEFKK YAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKLYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. ExPASy TrEMBL
Match: A0A6J1E9F7 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432044 PE=4 SV=1)

HSP 1 Score: 477 bits (1227), Expect = 2.03e-169
Identity = 241/255 (94.51%), Postives = 250/255 (98.04%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           MSDH+E AEPKSESLIDKIVEKIHDHDSSSSSGSD+ETEGSASSS+LKEKVFR+FGRERP
Sbjct: 1   MSDHSENAEPKSESLIDKIVEKIHDHDSSSSSGSDSETEGSASSSSLKEKVFRLFGRERP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VHHV GGGKPADLFLWRNKKISAGVLSGAT+IWVFFELLECHLLTF+SRSLILALGLLFL
Sbjct: 61  VHHVFGGGKPADLFLWRNKKISAGVLSGATVIWVFFELLECHLLTFVSRSLILALGLLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHTFIYKS PRIPVVQLPADPFLEFAS LRAEINCG ALLRDIATGRDLKKF+TAIA
Sbjct: 121 WSNAHTFIYKSAPRIPVVQLPADPFLEFASTLRAEINCGIALLRDIATGRDLKKFITAIA 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
           ALWVLSIVGSWCNFLTLFYINFVLL+TVPVVYEKYEDKIDPLAEKA+IEFKKHYAVFEEK
Sbjct: 181 ALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240

Query: 241 VLSKIPKGPLKGKKA 255
           VLSKIPKGPLKGKKA
Sbjct: 241 VLSKIPKGPLKGKKA 255

[Close]

BLAST of CsGy3G008540 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 304.7 bits (779), Expect = 7.1e-83
Identity = 162/250 (64.80%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 13  ESLIDKIVEKIH--DHDSSSSSGSDAETE------GSASSSTLKEKVFRIFGRERPVHHV 72
           ESL+DKI EKIH     SSSSS SD E E       S+ SS++K KV+R+FGRE+PVH V
Sbjct: 24  ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83

Query: 73  LGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNA 132
           LGGGKPAD+F+W+NKK+S GVL GAT  WV FEL+E HLLT +   +I+ L +LFLWSNA
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 133 HTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWV 192
             FI KSPP+IP V +P +P L+ AS LR EIN GF+ LR+IA+GRDLKKFL AIA LWV
Sbjct: 144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203

Query: 193 LSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVLSK 252
           LSI+G   NFLTL YI  VLL+TVP+ Y+KYEDK+DPL EKA+IE KK YAV +EKVLSK
Sbjct: 204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263

Query: 253 IPKGPLKGKK 255
           IP GPLK KK
Sbjct: 264 IPLGPLKNKK 273

[Close]

BLAST of CsGy3G008540 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 295.8 bits (756), Expect = 3.3e-80
Identity = 154/246 (62.60%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 13  ESLIDKIVEKIHDH-DSSSSSGSDAETEGSASSS---TLKEKVFRIFGRERPVHHVLGGG 72
           ESL++K+ EKIH   DSSSSS SD E E  +SSS   +LK KV+R+FGRERPVH VLGGG
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 73  KPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNAHTFI 132
           KPAD+F+W++KK+S GV  GAT+ WV FEL+E HLLT +   +I+AL +LFLWSNA  FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 133 YKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWVLSIV 192
           +KSPP+IP V +P +P L+ AS LR EIN G + LR+IA+GRD+KKFL+AIA LWVLSI+
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203

Query: 193 GSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVLSKIPKG 252
           G   +FLTL YI  VLL+TVP+ Y+KYEDK+D   EKA+ E KK YAV + KV SKIP+G
Sbjct: 204 GGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRG 263

Query: 253 PLKGKK 255
           PLK KK
Sbjct: 264 PLKDKK 269

[Close]

BLAST of CsGy3G008540 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 295.4 bits (755), Expect = 4.3e-80
Identity = 152/253 (60.08%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           M++  E + P  ESL++KI EKIH HDSSSS  S++E E   S S +K K++R+FGRE+P
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSS--SESEYEKPDSPSAVKAKIYRMFGREKP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VH VLGGGKPAD+FLWR+KK+S  VL  AT IWV FEL+E HLL+ +    ILALG LFL
Sbjct: 61  VHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
           WSNAHT I K+ P+IP + +P + FL  AS+LR E+N  F +LR IA GRDLKKFL  + 
Sbjct: 121 WSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
            LW++S+VG+W NFLTL YI FV+L+TVP++YEK+EDK+DPLAEKA+ E +K Y VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 240

Query: 241 VLSKIPKGPLKGK 254
           VLSKIP   LK K
Sbjct: 241 VLSKIPIASLKAK 251

[Close]

BLAST of CsGy3G008540 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein )

HSP 1 Score: 292.0 bits (746), Expect = 4.8e-79
Identity = 149/253 (58.89%), Postives = 189/253 (74.70%), Query Frame = 0


Query: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60
           M++  E +  K ESL++KI +KIHDHDSSSS  SD+E E   S S LK K++R+FGRE+P
Sbjct: 1   MAEELEKSMHKEESLMEKIADKIHDHDSSSS--SDSEHEKPESPSALKAKIYRLFGREKP 60

Query: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120
           VH VLGGG PAD+FLWR+KK+SA VL  AT IWV FEL+E H L+ +   LI AL  LFL
Sbjct: 61  VHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFL 120

Query: 121 WSNAHTFIYKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIA 180
            SNAH F+ K+PP+IP + +  + FL   SALR E+N  F +LR IA GRDLKKFL  + 
Sbjct: 121 LSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVF 180

Query: 181 ALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEK 240
            LW++S+VG+W NFLTL YI FV+L+TVP++YEK+EDK+DP+AEK + E KKHY VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEK 240

Query: 241 VLSKIPKGPLKGK 254
           VLSK+P   LK K
Sbjct: 241 VLSKLPVASLKAK 251

[Close]

BLAST of CsGy3G008540 vs. TAIR 10
Match: AT5G41600.1 (VIRB2-interacting protein 3 )

HSP 1 Score: 288.9 bits (738), Expect = 4.0e-78
Identity = 154/248 (62.10%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 13  ESLIDKIVEKIHDH-DSSSSSGSDAETEG-SASSSTLKEKVFRIFGRERPVHHVLGGGKP 72
           ES+++KIVEKIH H DSSS S SD + +  S+SSS+ K K++R+FGRE+PVH VLGGGKP
Sbjct: 9   ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68

Query: 73  ADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFLWSNAHTFIYK 132
           AD+FLWRNKK+S GVL   T  WV FEL E HLL F+    I AL  LFLWSNA TFI+K
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128

Query: 133 SPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTAIAALWVLSIVGS 192
           S P IP V +P DP L+  S LR EIN G  LLR+IA+G+D+KKF+  IA LWVLSI+GS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188

Query: 193 WCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFEEKVL----SKIP 252
             NFLTLFY   VLL+T+PV+YEKYEDK+D   EKA+ E KK YAV +EKVL    SKIP
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIP 248

Query: 253 KGPLKGKK 255
           +G L  KK
Sbjct: 249 RGALNKKK 256

The following BLAST results are available for this feature:

BLAST of CsGy3G008540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUR3	1.0e-81	64.80	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9SUT9	4.6e-79	62.60	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
O82352	6.1e-79	60.08	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
Q6DBN4	6.7e-78	58.89	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
Q9FFS0	5.7e-77	62.10	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]

BLAST of CsGy3G008540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133840.1	3.50e-177	100.00	reticulon-like protein B1 [Cucumis sativus] >KGN56474.1 hypothetical protein Csa...	[more]
KAA0048936.1	3.22e-173	97.65	reticulon-like protein B5 [Cucumis melo var. makuwa]	[more]
XP_008437980.1	1.86e-172	97.65	PREDICTED: reticulon-like protein B5 [Cucumis melo] >TYK17632.1 reticulon-like p...	[more]
XP_022924602.1	4.20e-169	94.51	reticulon-like protein B5 [Cucurbita moschata]	[more]
XP_023528640.1	1.20e-168	94.12	reticulon-like protein B5 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G008540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L627	1.69e-177	100.00	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G121020 PE=4 SV=1	[more]
A0A5A7U3V2	1.56e-173	97.65	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5D3D1C2	9.01e-173	97.65	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3AVW2	9.01e-173	97.65	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103483236 PE=4 SV=1	[more]
A0A6J1E9F7	2.03e-169	94.51	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432044 PE=4 SV=1	[more]

BLAST of CsGy3G008540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23630.1	7.1e-83	64.80	VIRB2-interacting protein 1	[more]
AT4G11220.1	3.3e-80	62.60	VIRB2-interacting protein 2	[more]
AT2G46170.1	4.3e-80	60.08	Reticulon family protein	[more]
AT3G61560.1	4.8e-79	58.89	Reticulon family protein	[more]
AT5G41600.1	4.0e-78	62.10	VIRB2-interacting protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 71..226 e-value: 7.4E-52 score: 175.5
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 70..255 score: 45.090576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	PANTHER	PTHR10994:SF159	RETICULON-LIKE PROTEIN	coord: 1..254
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 1..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G008540.2	CsGy3G008540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane