CsGy3G008380 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G008380
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	NDR1/HIN1-like protein 6
Location	Gy14Chr3: 6977659 .. 6979106 (+)
RNA-Seq Expression	CsGy3G008380
Synteny	CsGy3G008380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATAATATGTTTTTACCAAATTGGAATTTATGTGACGCAATCAATCGAAAGGCATTGCATACCCAAATTTCCGCCACCGTCACAAGACTCACTACTCGTCTTCCTCCTCTGTCTCACTCTCGCATTTTCCATCAATTTCTTCTCATCGGATGATCGGAATTCCGGCGGGTCTTCAGTCACCGGTTCGCCTCTAAGGTGATACTCATCGTCTTCTTCTTCTTTCTTGATCATTTCCGTTCTCCTGATTCCCAGAGATATGTTCGGTTCAGTTCCACATTACAATGAGATGGAATTCCATTTTCTCCTTCTTTCTTTCCCAAGGAAAACGAAATTCTCTATTATATTTCATATTATTTAATGCGATGCATGTATTTGACTGATTAACTGAATTGATTCGGTTCCTTTTTCTTCGTCTCGTTTTCTGCATTGATTTTTTATTTCTACTGTAATTAAATCAGATTTCCGTGAAGAATTTGTTGTGTAGTTCAGAGAATATGGCAGAGCCACCGCCATTGAAACCTATCCTCCAGAAGCCTCCGGGGTTTAAAGATCCGAATCACATTGCTCTGCCGGTGCCGAGACCGCCAGCGAGGAAACTGATATTACCGTCGCCTTTAAGCCAGAAGAACAAGAAGCGACGGAGCTGCTGGCGGAGATGCTGTTGCTTCTTCTGCCTTTTGGTACTGATCTTAATCGTCGCAATTCTGGCCGTCGGTGGCGTTTTATACCTCTGGTTTGAGCCCAAACTCCCTGTGGTTCATCTTCAATCATTCCGGATCTCCAAATTCAACGTCACCGACAAATCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGGATCGAAATCAAGAACCCTAACTCAAAGTTATCACTAAATTACGGCGATATCGAAGTTCAAATCGCCGCCGGAGAAGGCACTCGTACTGAATTAGGATCGATGATCGTGCCTAGCTTCATTCAATCGGAGGAGAACACGACAAGTTTGAAGATCGAAACAATGGTTAGCAACGAAACAGTAGACGACGGAGCAGGCCGGAACCTGAACTCCGGCAACCGGACCGGAGAACTGGTGGTAAATGTGGAAGCACGTACGAAAATAGGATTCGTGGTGGATGGCCGTAGAATGCCGCCGGTAAAGATTGAAGTGAGTTGCGGAAGTGTGAGCTTGAAACGTCTGGACAGAGGGAACGTGCCGAAATGCTCCATTCATTTGCGCCGATGGTTTCTGTAACCAAAAAAAGAAAGAAGAAGAAAATTAAATCAAATAAATTTAAGATGGTAATTACAGTGTGATTATTAAACTCTATGAACACAGAAAAGTTTATGCGATTGATTTTTACCCACAGAAAAACAAAATATAGGTATGCTTTTGGACTCAATTTTTGGTAACATTTTGATTTTTATAATTGTTCTGTAGAGAAAGATGTTGATAATTCATATCAT

mRNA sequence

TGATAATATGTTTTTACCAAATTGGAATTTATGTGACGCAATCAATCGAAAGGCATTGCATACCCAAATTTCCGCCACCGTCACAAGACTCACTACTCGTCTTCCTCCTCTGTCTCACTCTCGCATTTTCCATCAATTTCTTCTCATCGGATGATCGGAATTCCGGCGGGTCTTCAGTCACCGGTTCGCCTCTAAGTTCAGAGAATATGGCAGAGCCACCGCCATTGAAACCTATCCTCCAGAAGCCTCCGGGGTTTAAAGATCCGAATCACATTGCTCTGCCGGTGCCGAGACCGCCAGCGAGGAAACTGATATTACCGTCGCCTTTAAGCCAGAAGAACAAGAAGCGACGGAGCTGCTGGCGGAGATGCTGTTGCTTCTTCTGCCTTTTGGTACTGATCTTAATCGTCGCAATTCTGGCCGTCGGTGGCGTTTTATACCTCTGGTTTGAGCCCAAACTCCCTGTGGTTCATCTTCAATCATTCCGGATCTCCAAATTCAACGTCACCGACAAATCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGGATCGAAATCAAGAACCCTAACTCAAAGTTATCACTAAATTACGGCGATATCGAAGTTCAAATCGCCGCCGGAGAAGGCACTCGTACTGAATTAGGATCGATGATCGTGCCTAGCTTCATTCAATCGGAGGAGAACACGACAAGTTTGAAGATCGAAACAATGGTTAGCAACGAAACAGTAGACGACGGAGCAGGCCGGAACCTGAACTCCGGCAACCGGACCGGAGAACTGGTGGTAAATGTGGAAGCACGTACGAAAATAGGATTCGTGGTGGATGGCCGTAGAATGCCGCCGGTAAAGATTGAAGTGAGTTGCGGAAGTGTGAGCTTGAAACGTCTGGACAGAGGGAACGTGCCGAAATGCTCCATTCATTTGCGCCGATGGTTTCTGTAACCAAAAAAAGAAAGAAGAAGAAAATTAAATCAAATAAATTTAAGATGGTAATTACAGTGTGATTATTAAACTCTATGAACACAGAAAAGTTTATGCGATTGATTTTTACCCACAGAAAAACAAAATATAGGTATGCTTTTGGACTCAATTTTTGGTAACATTTTGATTTTTATAATTGTTCTGTAGAGAAAGATGTTGATAATTCATATCAT

Coding sequence (CDS)

ATGGCAGAGCCACCGCCATTGAAACCTATCCTCCAGAAGCCTCCGGGGTTTAAAGATCCGAATCACATTGCTCTGCCGGTGCCGAGACCGCCAGCGAGGAAACTGATATTACCGTCGCCTTTAAGCCAGAAGAACAAGAAGCGACGGAGCTGCTGGCGGAGATGCTGTTGCTTCTTCTGCCTTTTGGTACTGATCTTAATCGTCGCAATTCTGGCCGTCGGTGGCGTTTTATACCTCTGGTTTGAGCCCAAACTCCCTGTGGTTCATCTTCAATCATTCCGGATCTCCAAATTCAACGTCACCGACAAATCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGGATCGAAATCAAGAACCCTAACTCAAAGTTATCACTAAATTACGGCGATATCGAAGTTCAAATCGCCGCCGGAGAAGGCACTCGTACTGAATTAGGATCGATGATCGTGCCTAGCTTCATTCAATCGGAGGAGAACACGACAAGTTTGAAGATCGAAACAATGGTTAGCAACGAAACAGTAGACGACGGAGCAGGCCGGAACCTGAACTCCGGCAACCGGACCGGAGAACTGGTGGTAAATGTGGAAGCACGTACGAAAATAGGATTCGTGGTGGATGGCCGTAGAATGCCGCCGGTAAAGATTGAAGTGAGTTGCGGAAGTGTGAGCTTGAAACGTCTGGACAGAGGGAACGTGCCGAAATGCTCCATTCATTTGCGCCGATGGTTTCTGTAA

Protein sequence

MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFCLLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIKNPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGAGRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIHLRRWFL*

Homology

[Close]

BLAST of CsGy3G008380 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-11
Identity = 70/243 (28.81%), Postives = 108/243 (44.44%), Query Frame = 0


Query: 6   PLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFCLLVLI 65
           PL P         DP+ +  P+ + P R + L  P     KKRRSC  RC C+    +L+
Sbjct: 23  PLVPRGSSRSEHGDPSKV--PLNQRPQRFVPLAPP-----KKRRSCCCRCFCYTFCFLLL 82

Query: 66  LIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIKNPNSK 125
           L+VA+ A  G+LYL F+PKLP   +   ++++F +    D S   A  +  I  KNPN K
Sbjct: 83  LVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL--NQDSSLTTAFNV-TITAKNPNEK 142

Query: 126 LSLNYGD-IEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGAGRNL 185
           + + Y D  ++ +   E    +L +  +P F Q  ENTT + +E     +          
Sbjct: 143 IGIYYEDGSKITVWYME---HQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLE 202

Query: 186 NSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPK-----CSI 243
               RTG + + +     +       ++  V+  V CG V +  L   NV K     C  
Sbjct: 203 EQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCG-VFVDSLATNNVIKIQSSSCKF 251

[Close]

BLAST of CsGy3G008380 vs. NCBI nr
Match: XP_011650715.1 (NDR1/HIN1-like protein 6 isoform X2 [Cucumis sativus] >XP_011650717.1 NDR1/HIN1-like protein 6 isoform X2 [Cucumis sativus])

HSP 1 Score: 488 bits (1255), Expect = 1.13e-173
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. NCBI nr
Match: XP_031737695.1 (NDR1/HIN1-like protein 6 isoform X1 [Cucumis sativus])

HSP 1 Score: 488 bits (1255), Expect = 1.40e-172
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 70  MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 129

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 130 LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 189

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA
Sbjct: 190 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 249

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH
Sbjct: 250 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 309

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 310 LRRWFL 315

[Close]

BLAST of CsGy3G008380 vs. NCBI nr
Match: KGN56498.2 (hypothetical protein Csa_009859 [Cucumis sativus])

HSP 1 Score: 488 bits (1255), Expect = 9.90e-170
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. NCBI nr
Match: KAA0048921.1 (protein YLS9 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 472 bits (1215), Expect = 1.42e-167
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           L VLILIV ILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQ+AAGEGTRTELGSMIVPSFIQSEENTTSLKIETMV+NETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GR LNSGNRTGELVVNVEARTKIGFVV+GRRMPPVKIEV+CGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. NCBI nr
Match: XP_008437954.2 (PREDICTED: uncharacterized protein LOC103483219 [Cucumis melo] >XP_008437955.1 PREDICTED: uncharacterized protein LOC103483219 [Cucumis melo] >XP_008437956.1 PREDICTED: uncharacterized protein LOC103483219 [Cucumis melo] >XP_016898912.1 PREDICTED: uncharacterized protein LOC103483219 [Cucumis melo] >TYK17647.1 protein YLS9 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 469 bits (1206), Expect = 3.34e-166
Identity = 236/246 (95.93%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           L VLILIV ILAVGGVLYLWFE KLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQ+AAGEGTRTELGSMIVPSFIQSEENTTSLKIETMV+NETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GR LNSGNRTGELVVNVEARTKIGFVV+GRRMPPVKIEV+CGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. ExPASy TrEMBL
Match: A0A0A0L3Z7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G120370 PE=4 SV=1)

HSP 1 Score: 488 bits (1255), Expect = 5.48e-174
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. ExPASy TrEMBL
Match: A0A5A7U5Q0 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001400 PE=4 SV=1)

HSP 1 Score: 472 bits (1215), Expect = 6.87e-168
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           L VLILIV ILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQ+AAGEGTRTELGSMIVPSFIQSEENTTSLKIETMV+NETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GR LNSGNRTGELVVNVEARTKIGFVV+GRRMPPVKIEV+CGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. ExPASy TrEMBL
Match: A0A1S3AV73 (uncharacterized protein LOC103483219 OS=Cucumis melo OX=3656 GN=LOC103483219 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 1.62e-166
Identity = 236/246 (95.93%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           L VLILIV ILAVGGVLYLWFE KLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQ+AAGEGTRTELGSMIVPSFIQSEENTTSLKIETMV+NETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GR LNSGNRTGELVVNVEARTKIGFVV+GRRMPPVKIEV+CGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. ExPASy TrEMBL
Match: A0A5D3D146 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005190 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 1.62e-166
Identity = 236/246 (95.93%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           L VLILIV ILAVGGVLYLWFE KLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPNSKLSLNYGDIEVQ+AAGEGTRTELGSMIVPSFIQSEENTTSLKIETMV+NETVDDGA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GR LNSGNRTGELVVNVEARTKIGFVV+GRRMPPVKIEV+CGSVSLKRLDRGNVPKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LRRWFL 246
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of CsGy3G008380 vs. ExPASy TrEMBL
Match: A0A6J1IP67 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479287 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 2.42e-138
Identity = 207/246 (84.15%), Postives = 215/246 (87.40%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60
           MAEPP LKP+LQKPPG+KDPN  A PVPRPPARKLILPSPLSQ NKKRRSC RR CCF C
Sbjct: 1   MAEPP-LKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLC 60

Query: 61  LLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120
           L VLILIV I+A GG LYLWFEPKLPV HLQSFRISKFNVTDK+DGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVIVAAGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 180
           NPN KLSLNY DIEV  AAGEGTR ELGS IVPSFI S+ENTTS KIETMVSNE VD GA
Sbjct: 121 NPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIHSKENTTSWKIETMVSNEIVDGGA 180

Query: 181 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 240
           GR LNSGN+TGELVV VEARTKIGFV++GRR P VKIEVSCG VSLKRLD GN PKCSIH
Sbjct: 181 GRKLNSGNKTGELVVIVEARTKIGFVLNGRRTPRVKIEVSCGGVSLKRLDGGNTPKCSIH 240

Query: 241 LRRWFL 246
           L RWFL
Sbjct: 241 LPRWFL 245

[Close]

BLAST of CsGy3G008380 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 99/244 (40.57%), Postives = 150/244 (61.48%), Query Frame = 0


Query: 7   LKPILQKPPGFKDPNHIALPVPRPPAR----KLILPSPLSQK-NKKRRSCWRRCCCFFCL 66
           + P+LQKPPG++DPN  + P P PP +    +  +P P S +  KKRRSC R CCC  C+
Sbjct: 6   MNPVLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCCCCICI 65

Query: 67  LVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIKN 126
            +++ I  +L    V YLWF+PKLP   L SFR+  F + D  DG+ L+A  + R+E+KN
Sbjct: 66  TLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVARVEMKN 125

Query: 127 PNSKLSLNYGDIEVQIAAGEGT-RTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGA 186
           PNSKL   YG+  V ++ G G   T +G   +  F Q  +N+TS+K+ET V N+ V+ G 
Sbjct: 126 PNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQLVERGL 185

Query: 187 GRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIH 245
            + L +  ++ +LV+NV A+TK+G  V G ++  + + + CG VSL +LD  + PKC ++
Sbjct: 186 AKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLDTDS-PKCILN 245

[Close]

BLAST of CsGy3G008380 vs. TAIR 10
Match: AT1G01453.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-38
Identity = 97/252 (38.49%), Postives = 142/252 (56.35%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKD-PNHIALPVPRPPARKLILPSPLSQKNKKRR-SCWRRCCCF 60
           MA   PL+P LQKPPGF+D  N  + P           P P+   +KKRR S  R  CC 
Sbjct: 14  MAAEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPADKKRRCSFCRVFCCC 73

Query: 61  FCLLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTD-KSDG--SYLNAKTIG 120
            C+L  ++++ IL    V +LW+ PKLPVV L SF+IS FN +D KSD   S+L+A T  
Sbjct: 74  VCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTTS 133

Query: 121 RIEIKNPNSKLSLNYGDIEVQIAAGE-GTRTELGSMIVPSFIQSEENTTSLKIETMVSNE 180
            ++ +NPN KL+  YGD +V +  GE    T L S  V  FI+   N T++ + T V   
Sbjct: 134 VLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRKR 193

Query: 181 TVDDGAGRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNV 240
            VDD   + L    ++ +L+V V A+TK+G  V  R++  V + + CG V L+ LD   +
Sbjct: 194 QVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLD-SKM 253

Query: 241 PKCSIHLRRWFL 247
            +C+I + +W++
Sbjct: 254 AQCTIKMLKWYV 264

[Close]

BLAST of CsGy3G008380 vs. TAIR 10
Match: AT1G01453.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-37
Identity = 97/250 (38.80%), Postives = 140/250 (56.00%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKD-PNHIALPVPRPPARKLILPSPLSQKNKKRR-SCWRRCCCF 60
           MA   PL+P LQKPPGF+D  N  + P           P P+   +KKRR S  R  CC 
Sbjct: 14  MAAEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPADKKRRCSFCRVFCCC 73

Query: 61  FCLLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTD-KSDG--SYLNAKTIG 120
            C+L  ++++ IL    V +LW+ PKLPVV L SF+IS FN +D KSD   S+L+A T  
Sbjct: 74  VCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTTS 133

Query: 121 RIEIKNPNSKLSLNYGDIEVQIAAGE-GTRTELGSMIVPSFIQSEENTTSLKIETMVSNE 180
            ++ +NPN KL+  YGD +V +  GE    T L S  V  FI+   N T++ + T V   
Sbjct: 134 VLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRKR 193

Query: 181 TVDDGAGRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNV 240
            VDD   + L    ++ +L+V V A+TK+G  V  R++  V + + CG V L+ LD   +
Sbjct: 194 QVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLD-SKM 253

Query: 241 PKCSIHLRRW 245
            +C+I + +W
Sbjct: 254 AQCTIKMLKW 262

[Close]

BLAST of CsGy3G008380 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 4.5e-34
Identity = 89/259 (34.36%), Postives = 141/259 (54.44%), Query Frame = 0


Query: 1   MAEPPPLKPILQKPPGFKD-----------PNHIALPVPRPPARKLILPSPLSQKNKKRR 60
           MA    LKP+LQKPPG+++            +  +  + RPP  K  +P+      K++ 
Sbjct: 1   MAGETLLKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPP--KHAIPAAFYPTKKRQW 60

Query: 61  SCWRRCCCFFCLLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDG--- 120
           S  R  CC  C+ V I+I+ ++    V +L++ P+LPVV L SFR+S FN +    G   
Sbjct: 61  SRCRVFCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGL 120

Query: 121 SYLNAKTIGRIEIKNPNSKLSLNYGDIEVQIAAGEGT-RTELGSMIVPSFIQSEENTTSL 180
           S L A+   R++ +NPN KL   YG+++V ++ GE    T LGS  V  F++   N T +
Sbjct: 121 SQLTAEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVV 180

Query: 181 KIETMVSNETVDDGAGRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVS 240
            +   V  + VDD   + L +  ++ +LVV V A+TK+G  V  R++  V + +SCG V 
Sbjct: 181 IVPIKVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVR 240

Query: 241 LKRLDRGNVPKCSIHLRRW 245
           L+ LD   + KC+I + +W
Sbjct: 241 LQTLD-SKMSKCTIKMLKW 256

[Close]

BLAST of CsGy3G008380 vs. TAIR 10
Match: AT5G11890.1 (FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14
Identity = 67/245 (27.35%), Postives = 115/245 (46.94%), Query Frame = 0


Query: 4   PPPLKPILQKPPGFKDPNHIALPVPR---PPARKLILPSPLSQK--NKKRRSCWR--RCC 63
           PPP  P      G    N +A   P+   P  R +  P P S++  ++ R SC R   CC
Sbjct: 25  PPPPAPATVTSNG--TTNGMANQKPQVYIPANRPVYRPQPYSRRHHHQSRPSCRRICCCC 84

Query: 64  CFFCLLVLILIVAILAVGG-VLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIG 123
           CF+ +L+++++  + A+    +Y+ + P+ P   + S RIS+ N+T  SD S  +  +  
Sbjct: 85  CFWSILIILILALMTAIAATAMYVIYHPRPPSFSVPSIRISRVNLTTSSDSSVSHLSSFF 144

Query: 124 RIEI--KNPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLK--IETMV 183
              +  +NPN  LS +Y    V + + + + T LG+  VP+F     N TS    I T  
Sbjct: 145 NFTLISENPNQHLSFSYDPFTVTVNSAK-SGTMLGNGTVPAFFSDNGNKTSFHGVIATST 204

Query: 184 SNETVDDGAGRNLNSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDR 237
           +   +D    ++L S      +   +E RTK+  ++   +   V+I+V+C          
Sbjct: 205 AARELDPDEAKHLRSDLTRARVGYEIEMRTKVKMIMGKLKSEGVEIKVTCEGF------E 260

The following BLAST results are available for this feature:

BLAST of CsGy3G008380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	4.0e-11	28.81	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of CsGy3G008380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650715.1	1.13e-173	100.00	NDR1/HIN1-like protein 6 isoform X2 [Cucumis sativus] >XP_011650717.1 NDR1/HIN1-...	[more]
XP_031737695.1	1.40e-172	100.00	NDR1/HIN1-like protein 6 isoform X1 [Cucumis sativus]	[more]
KGN56498.2	9.90e-170	100.00	hypothetical protein Csa_009859 [Cucumis sativus]	[more]
KAA0048921.1	1.42e-167	96.34	protein YLS9 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008437954.2	3.34e-166	95.93	PREDICTED: uncharacterized protein LOC103483219 [Cucumis melo] >XP_008437955.1 P...	[more]

BLAST of CsGy3G008380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3Z7	5.48e-174	100.00	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G120370 PE=4 ...	[more]
A0A5A7U5Q0	6.87e-168	96.34	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3AV73	1.62e-166	95.93	uncharacterized protein LOC103483219 OS=Cucumis melo OX=3656 GN=LOC103483219 PE=...	[more]
A0A5D3D146	1.62e-166	95.93	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1IP67	2.42e-138	84.15	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479287 PE=4 SV=1	[more]

BLAST of CsGy3G008380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46300.1	1.4e-48	40.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G01453.2	3.0e-38	38.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01453.1	1.1e-37	38.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G01110.1	4.5e-34	34.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G11890.1	2.3e-14	27.35	FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 117..212 e-value: 7.8E-8 score: 32.8
None	No IPR available	PANTHER	PTHR31234:SF48	SUBFAMILY NOT NAMED	coord: 1..245
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G008380.2	CsGy3G008380.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane