CsGy3G007530 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G007530
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Phosphoglycerate mutase family protein
Location	Gy14Chr3: 6521576 .. 6522619 (-)
RNA-Seq Expression	CsGy3G007530
Synteny	CsGy3G007530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTTGTTCCGAAAGTGTCTAAAGGAAGCAAAACGTCGATTTACTGTGGTTCATGGGTGATGGATTACGCGCTATCGGGGAGTAAGACCAAGAACATTTGCCGGAGAGTGGGGAGAGGTTGGGTGAACGGGTCTTGTGCGGCTGGAAAACGAAAGTAAAGAGAGTGGCGGGTGCGAGAGCTTCGCGGTTAAGAGGGCCATAAATTGTGGACATGGGTTTGGTACGGTCCGGTTTGAATAAAAGCAAGGTTCGAGGTTCGAACCGAAGAGATTGGTTTTCAAGGACTTTTTAAACCGAACTCTATGGCCTTTCTCATCGGGTTTGGTTTGGTTTGGTGATTGTGTTTGGGTTAGAGCTATTTTTCTAATTGAAAGTTCATTTTTCTTGATAATTCTTTCTAAGAGAAAATGAAAAAAAAGGATATGCTTATGATTTTAATTAAAGTCATATTAATTACTGGCTTTTAATAATTTTAGTCCATATGCTTTAAAATTATAAATGAAAATAGTTGACAATTTTAAGGGGTGCTTGACATGTTTTTTTAAAAAACATTCATCATGGAAGTGTTTATTTGAACTGAAATATTGGACCTTTGAAATTAACTAATTAAGTTAAAATGTAAGAGTTTGCTCCATATAGGTGTAAGGTGTCTATAGAATATGGGTTCTGTGAGAAGCTAAACCACAAAGCAATACCACCTGAAGTGGCTCCAAAGGATTGGAAATGGGGTTTCAACATCTTAGATCTTCAAACAATATTACCTACCGCTTCTACAGACCATTCTATAGAACCTATATATGAAAGAGGTTCAAACATAACTAGCCGTTACAGCTCGTTCCATAACACTTCTATGTTCTGTTTCCTCTTCTACTTCTGAATCATCTCGTTTCTTTCCTGTTTCAATATCTCATCTCAGATGCCCCAATTTGGAGAGGTCCCTACGACTATACGATCGAGATTTTAACAGGTTTTCAAGACTCTGGCTGATAAATACATTCCCTGAACATCATGCTTATCACTCGTGGGCAGCTATAGATTGA

mRNA sequence

ATGCTTGTTGTTCCGAAAGTGTCTAAAGGAAGCAAAACGTCGATTTACTGTGGTTCATGGGTGATGGATTACGCGCTATCGGGGAGTAAGACCAAGAACATTTGCCGGAGAGTGGGGAGAGGTTGGGTGAACGGGTCTTGTGCGGCTGGAAAACGAAAGTGTAAGGTGTCTATAGAATATGGGTTCTGTGAGAAGCTAAACCACAAAGCAATACCACCTGAAGTGGCTCCAAAGGATTGGAAATGGGCCGTTACAGCTCGTTCCATAACACTTCTATGTTCTGTTTCCTCTTCTACTTCTGAATCATCTCGTTTCTTTCCTGTTTCAATATCTCATCTCAGATGCCCCAATTTGGAGAGGTCCCTACGACTATACGATCGAGATTTTAACAGGTTTTCAAGACTCTGGCTGATAAATACATTCCCTGAACATCATGCTTATCACTCGTGGGCAGCTATAGATTGA

Coding sequence (CDS)

ATGCTTGTTGTTCCGAAAGTGTCTAAAGGAAGCAAAACGTCGATTTACTGTGGTTCATGGGTGATGGATTACGCGCTATCGGGGAGTAAGACCAAGAACATTTGCCGGAGAGTGGGGAGAGGTTGGGTGAACGGGTCTTGTGCGGCTGGAAAACGAAAGTGTAAGGTGTCTATAGAATATGGGTTCTGTGAGAAGCTAAACCACAAAGCAATACCACCTGAAGTGGCTCCAAAGGATTGGAAATGGGCCGTTACAGCTCGTTCCATAACACTTCTATGTTCTGTTTCCTCTTCTACTTCTGAATCATCTCGTTTCTTTCCTGTTTCAATATCTCATCTCAGATGCCCCAATTTGGAGAGGTCCCTACGACTATACGATCGAGATTTTAACAGGTTTTCAAGACTCTGGCTGATAAATACATTCCCTGAACATCATGCTTATCACTCGTGGGCAGCTATAGATTGA

Protein sequence

MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLERSLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID*

Homology

[Close]

BLAST of CsGy3G007530 vs. NCBI nr
Match: KGN56370.1 (hypothetical protein Csa_011764 [Cucumis sativus])

HSP 1 Score: 327 bits (839), Expect = 2.69e-113
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEY 60
           MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEY
Sbjct: 1   MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEY 60

Query: 61  GFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLER 120
           GFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLER
Sbjct: 61  GFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLER 120

Query: 121 SLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID 154
           SLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID
Sbjct: 121 SLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID 154

[Close]

BLAST of CsGy3G007530 vs. NCBI nr
Match: XP_008437818.1 (PREDICTED: uncharacterized protein LOC103483133 isoform X2 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 2.13e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 92  SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 145

[Close]

BLAST of CsGy3G007530 vs. NCBI nr
Match: XP_008437817.1 (PREDICTED: uncharacterized protein LOC103483133 isoform X1 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 2.28e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 92  SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 145

[Close]

BLAST of CsGy3G007530 vs. NCBI nr
Match: TYK20794.1 (Phosphoglycerate mutase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 5.14e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 235 SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 288

[Close]

BLAST of CsGy3G007530 vs. NCBI nr
Match: KAA0048840.1 (Phosphoglycerate mutase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 5.19e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 235 SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 288

[Close]

BLAST of CsGy3G007530 vs. ExPASy TrEMBL
Match: A0A0A0L2Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118050 PE=4 SV=1)

HSP 1 Score: 327 bits (839), Expect = 1.30e-113
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEY 60
           MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEY
Sbjct: 1   MLVVPKVSKGSKTSIYCGSWVMDYALSGSKTKNICRRVGRGWVNGSCAAGKRKCKVSIEY 60

Query: 61  GFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLER 120
           GFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLER
Sbjct: 61  GFCEKLNHKAIPPEVAPKDWKWAVTARSITLLCSVSSSTSESSRFFPVSISHLRCPNLER 120

Query: 121 SLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID 154
           SLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID
Sbjct: 121 SLRLYDRDFNRFSRLWLINTFPEHHAYHSWAAID 154

[Close]

BLAST of CsGy3G007530 vs. ExPASy TrEMBL
Match: A0A1S3AUJ8 (uncharacterized protein LOC103483133 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483133 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.03e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 92  SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 145

[Close]

BLAST of CsGy3G007530 vs. ExPASy TrEMBL
Match: A0A1S3AVH2 (uncharacterized protein LOC103483133 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483133 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.10e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 92  SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 145

[Close]

BLAST of CsGy3G007530 vs. ExPASy TrEMBL
Match: A0A5D3DB66 (Phosphoglycerate mutase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00550 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.49e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 235 SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 288

[Close]

BLAST of CsGy3G007530 vs. ExPASy TrEMBL
Match: A0A5A7U0B1 (Phosphoglycerate mutase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00530 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.51e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 48  AAGKRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI-TLLCSVSSSTS 100
           +A   + KVSIEYG CEKLNHKAIPPEVAPKDW W      + T+L +VS+  S
Sbjct: 235 SAATSQLKVSIEYGLCEKLNHKAIPPEVAPKDWNWGFNISDLQTILPTVSTDHS 288

[Close]

BLAST of CsGy3G007530 vs. TAIR 10
Match: AT3G60450.1 (Phosphoglycerate mutase family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.0e-04
Identity = 22/39 (56.41%), Postives = 24/39 (61.54%), Query Frame = 0


Query: 51  KRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKWAVTARSI 90
           K K KVSIE G CE LN  AI  E+APKD K+  T   I
Sbjct: 108 KSKLKVSIELGLCEMLNSVAIRRELAPKDGKFDFTVSDI 146

[Close]

BLAST of CsGy3G007530 vs. TAIR 10
Match: AT3G60440.1 (Phosphoglycerate mutase family protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.2e-04
Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 0


Query: 51  KRKCKVSIEYGFCEKLNHKAIPPEVAPKDWKW 83
           K K KVSIE+G  E LN  AI PE+APKD K+
Sbjct: 131 KYKLKVSIEFGLSEMLNSIAIKPEIAPKDGKF 162

The following BLAST results are available for this feature:

BLAST of CsGy3G007530 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G007530 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56370.1	2.69e-113	100.00	hypothetical protein Csa_011764 [Cucumis sativus]	[more]
XP_008437818.1	2.13e-10	59.26	PREDICTED: uncharacterized protein LOC103483133 isoform X2 [Cucumis melo]	[more]
XP_008437817.1	2.28e-10	59.26	PREDICTED: uncharacterized protein LOC103483133 isoform X1 [Cucumis melo]	[more]
TYK20794.1	5.14e-10	59.26	Phosphoglycerate mutase family protein [Cucumis melo var. makuwa]	[more]
KAA0048840.1	5.19e-10	59.26	Phosphoglycerate mutase family protein [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G007530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Z8	1.30e-113	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118050 PE=4 SV=1	[more]
A0A1S3AUJ8	1.03e-10	59.26	uncharacterized protein LOC103483133 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3AVH2	1.10e-10	59.26	uncharacterized protein LOC103483133 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DB66	2.49e-10	59.26	Phosphoglycerate mutase family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7U0B1	2.51e-10	59.26	Phosphoglycerate mutase family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CsGy3G007530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60450.1	4.0e-04	56.41	Phosphoglycerate mutase family protein	[more]
AT3G60440.1	5.2e-04	62.50	Phosphoglycerate mutase family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G007530.2	CsGy3G007530.2	mRNA