CsGy3G006300 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G006300
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBeta-glucuronosyltransferase GlcAT14A-like
LocationGy14Chr3: 5322098 .. 5322825 (-)
RNA-Seq ExpressionCsGy3G006300
SyntenyCsGy3G006300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGAACGACGACGAAAATCCAGCCGAACCCTCGATCGGAGAAAAAACGATTTCGACTGCAACAATCGGAGACAAATTACTAGTCTCGATAAGCGATCGGAGAGAAAATCCAGGTGAAGCCACGTTTTCTTTGTTTATCGTAGAGAGAATCGACGACCCACCACTTCGACTTCAACTGATGCGATTTGAGCCGATCTATACCCTGATTGCTACTTCTGACCCGAAGTACCGGTTTCTTATGATTTTGACTGCAAGGAGGACGATTGCAACTTCCGAAATTTCCACGGGACTCTTCATTTCGTTTCAACAAGGTAGGTTTTCAATTACGATTGGTTTACTTCATACTTGTTATGCAGTTATTCATGTGACCTTTTCTGCAGAGCATGACGACCTTTGTGATCGTATTGCAATCTAATGATCCATGCTTGTTATGCAGTTATTCGTGACTATTATTATGTCTTGTTTAGTTTCTTTCTGCATGTGCTTGGCTTTATTTTTGGTGTGTGGATGACTGGGTTACTGTTAATTGTGTGTAGAAATTAATTAGTTATCGAGTCACTTTTATTTTGTATTGGTCGCAATCTTTTTATATTTCACATTTTTCGATCTTTTTACCGTGTGTTTTGAATCCCAGATCTTCGAAGGATGCTTCTCTCTGAACTGGAATCGCCAAAGAATCGAAGATCTACCAAACCAACAACCCATTTCCCTAGAAGAATCTGA

mRNA sequence

ATGGAGATGAACGACGACGAAAATCCAGCCGAACCCTCGATCGGAGAAAAAACGATTTCGACTGCAACAATCGGAGACAAATTACTAGTCTCGATAAGCGATCGGAGAGAAAATCCAGGTGAAGCCACGTTTTCTTTGTTTATCGTAGAGAGAATCGACGACCCACCACTTCGACTTCAACTGATGCGATTTGAGCCGATCTATACCCTGATTGCTACTTCTGACCCGAAGTACCGGTTTCTTATGATTTTGACTGCAAGGAGGACGATTGCAACTTCCGAAATTTCCACGGGACTCTTCATTTCGTTTCAACAAGATCTTCGAAGGATGCTTCTCTCTGAACTGGAATCGCCAAAGAATCGAAGATCTACCAAACCAACAACCCATTTCCCTAGAAGAATCTGA

Coding sequence (CDS)

ATGGAGATGAACGACGACGAAAATCCAGCCGAACCCTCGATCGGAGAAAAAACGATTTCGACTGCAACAATCGGAGACAAATTACTAGTCTCGATAAGCGATCGGAGAGAAAATCCAGGTGAAGCCACGTTTTCTTTGTTTATCGTAGAGAGAATCGACGACCCACCACTTCGACTTCAACTGATGCGATTTGAGCCGATCTATACCCTGATTGCTACTTCTGACCCGAAGTACCGGTTTCTTATGATTTTGACTGCAAGGAGGACGATTGCAACTTCCGAAATTTCCACGGGACTCTTCATTTCGTTTCAACAAGATCTTCGAAGGATGCTTCTCTCTGAACTGGAATCGCCAAAGAATCGAAGATCTACCAAACCAACAACCCATTTCCCTAGAAGAATCTGA

Protein sequence

MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQLMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQDLRRMLLSELESPKNRRSTKPTTHFPRRI*
Homology
[Close]
BLAST of CsGy3G006300 vs. NCBI nr
Match: KAE8650181.1 (hypothetical protein Csa_010341, partial [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 2.98e-65
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60
           MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ
Sbjct: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60

Query: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 105
           LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ
Sbjct: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 105

[Close]
BLAST of CsGy3G006300 vs. NCBI nr
Match: KAA0060632.1 (hypothetical protein E6C27_scaffold22G005150 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.70e-13
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 105
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQ
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQ 44

[Close]
BLAST of CsGy3G006300 vs. NCBI nr
Match: TYK02239.1 (beta-glucuronosyltransferase GlcAT14A-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 9.67e-12
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQDLR 108
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQ +R
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQVIR 47

[Close]
BLAST of CsGy3G006300 vs. ExPASy TrEMBL
Match: A0A0A0L7Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G105980 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 5.82e-87
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60
           MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ
Sbjct: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60

Query: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQDLRRMLLSELESPKN 120
           LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQDLRRMLLSELESPKN
Sbjct: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQDLRRMLLSELESPKN 120

Query: 121 RRSTKPTTHFPRRI 134
           RRSTKPTTHFPRR 
Sbjct: 121 RRSTKPTTHFPRRF 134

[Close]
BLAST of CsGy3G006300 vs. ExPASy TrEMBL
Match: A0A5A7UXN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005150 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.79e-13
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 105
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQ
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQ 44

[Close]
BLAST of CsGy3G006300 vs. ExPASy TrEMBL
Match: A0A5D3BVW6 (Beta-glucuronosyltransferase GlcAT14A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00360 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.68e-12
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQDLR 108
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQ +R
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQVIR 47

The following BLAST results are available for this feature:
BLAST of CsGy3G006300 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G006300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650181.12.98e-65100.00hypothetical protein Csa_010341, partial [Cucumis sativus][more]
KAA0060632.13.70e-1384.09hypothetical protein E6C27_scaffold22G005150 [Cucumis melo var. makuwa][more]
TYK02239.19.67e-1280.85beta-glucuronosyltransferase GlcAT14A-like [Cucumis melo var. makuwa][more]
BLAST of CsGy3G006300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z55.82e-8799.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G105980 PE=4 SV=1[more]
A0A5A7UXN91.79e-1384.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVW64.68e-1280.85Beta-glucuronosyltransferase GlcAT14A-like OS=Cucumis melo var. makuwa OX=119469... [more]
BLAST of CsGy3G006300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G006300.2CsGy3G006300.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0015020 glucuronosyltransferase activity